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References

  • 1
    Cerniglia, C.E. and Heitkamp, M.A. (1989) Microbial degradation of polycyclic aromatic hydrocarbons (PAH) in the aquatic environment. In: Metabolism of Polycyclic Aromatic Hydrocarbons in the Aquatic Environment (U. Varanasi Ed.), pp. 41–68, CRC press, Boca Raton, FL.
  • 2
    Yen, K.M. and Serdar, C.M. (1988) Genetics of naphthalene catabolism in pseudomonads. Crit. Rev. Microbiol. 15, 247268.
  • 3
    Pothuluri, J.V. and Cerniglia, C.E. (1994) Microbial metabolism of polycyclic aromatic hydrocarbons. In: Biological Degradation and Bioremediation of Toxic Chemicals (Chaudhry, G.R., Ed.), Dioscorides Press, Portland, OR, pp. 92–124.
  • 4
    Eaton, R.W. and Chapman, P.J. (1992) Bacterial metabolism of naphthalene: construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydroxynaphthalene and subsequent reactions. J. Bacteriol. 174, 75427554.
  • 5
    Harayama, S. and Kok, M. (1992) Functional and evolutionary relationships among diverse oxygenases. Annu. Rev. Microbiol. 46, 565601.
  • 6
    Mason, J.R. and Cammack, R. (1992) The electron-transport proteins of hydroxylating bacterial dioxygenases. Annu. Rev. Microbiol. 46, 277305.
  • 7
    Burlage, S., Hooper, S.W. and Sayler, G.S. (1989) The TOL (pWW0) plasmid. Appl. Environ. Microbiol. 55, 13231328.
  • 8
    Menn, F., Applegate, B.M. and Sayler, G.S. (1993) NAH plasmid-mediated catabolism of anthracene and phenanthrene to naphthoic acids. Appl. Environ. Microbiol. 59, pp. 1938–1942.
  • 9
    Sanseverino, J., Applegate, B.M., King, J.M.H. and Sayler, G.S. (1993) Plasmid-mediated mineralization of naphthalene, phenanthrene and anthracene. Appl. Environ. Microbiol. 59, pp. 1931–1937.
  • 10
    Yang, Y., Chen, R.F. and Shiaris, M.P. (1994) Metabolism of naphthalene, fluorene and phenanthrene: preliminary characterization of a cloned gene cluster from Pseudomonas putida NCIB 9816. J. Bacteriol. 176, 21582164.
  • 11
    Goyal, A.K. and Zylstra, G.J. (1996) Molecular cloning of novel genes for polycyclic aromatic hydrocarbon degradation from Comamonas testosteroni GZ 39. Appl. Environ. Microbiol. 62, 230236.
  • 12
    Neidle, E.L., Hartnett, C., Ornston, L.N., Bairoch, A., Rekik, M. and Harayama, S. (1991) Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases. J. Bacteriol. 173, 53855395.
  • 13
    Kurkela, S., Lehvaslaiho, H., Tapio Palva, E. and Teeri, T.H. (1988) Cloning, nucleotide sequence and characterization of genes encoding naphthalene dioxygenase of Pseudomonas putida strain NCIB 9816. Gene 73, 355–362
  • 14
    Erikson, B.N. and Mondello, F.J. (1992) Nucleotide sequencing and transcriptional mapping of genes encoding biphenyl dioxygenase, a multicomponent PCB-degrading enzyme in Pseudomonas strain LB 400. J. Bacteriol. 174, 29032912.
  • 15
    Irie, S., Doi, S., Yorifuji, T., Takagi, M. and Yano, K. (1987) Nucleotide sequencing and characterization of the genes encoding benzene oxidation enzymes in Pseudomonas putida. J. Bacteriol. 169, 51745179.
  • 16
    Zylstra, G.J. and Gibson, D.T. (1989) Toluene degradation by Pseudomonas putida F1: nucleotide sequence of the tod C1C2BADE genes and their expression in E. coli. J. Biol. Chem. 264, 1494014946.
  • 17
    Deutsche Sammlung für Mikroorganismen, Braunschweig, Germany: Catalogue 1992.
  • 18
    Mahro, B., Rode, K. and Kasche, V. (1995) Non-selective precultivation of bacteria able to degrade different polycyclic aromatic hydrocarbons (PAH). Acta Biotechnol. 15-4, 337–345.
  • 19
    Gayer-Herkert, G. (1992) Anwendung nicht-radioaktiver DNA-Sonden für das Monitoring einer ‘Spezialkultur’ der aeroben Abwasserreinigung. Dissertation, Technical University Darmstadt, Germany.
  • 20
    Lechner, S. (1994) Charakterisierung natürlicher Bakterienpopulationen mit physiologischen und molekularbiologischen Techniken. Dissertation, University of Konstanz, Germany.
  • 21
    The Dig-System User Guide, Boehringer/Mannheim, Germany, 1994.
  • 22
    Pellizari, V.H., Bezborodnikov, S., Quensen, J.F. and Tiedje, J.M. (1996) Evaluation of strains isolated by growth on naphthalene and biphenyl for hybridization of genes to dioxygenase probes and polychlorinated biphenyl-degrading ability. Appl. Environ. Microbiol. 62, 20532058.
  • 23
    Foght, J.M. and Westlake, D.W.S. (1991) Cross hybridization of plasmid and genomic DNA from aromatic and polycyclic aromatic hydrocarbon degrading bacteria. Can. J. Microbiol. 37, 924932.
  • 24
    Furukawa, K., Hayase, N., Taira, K. and Tomizuka, N. (1989) Molecular relationship of chromosomal genes encoding biphenyl/polychlorinated biphenyl catabolism: some soil bacteria possess a highly conserved bph operon. J. Bacteriol. 171, 54675472.
  • 25
    Yates, J.R. and Mondello, F.J. (1989) Sequence similarities in the genes encoding polychlorinated biphenyl degradation by Pseudomonas strain LB 400 and Alcaligenes eutrophus H850. J. Bacteriol. 171, 17331735.
  • 26
    Foght, J.M. and Westlake, D.W.S. (1990) Expression of dibenzothiophene-degradative genes in two Pseudomonas species. Can. J. Microbiol. 36, 718724.
  • 27
    Zylstra, G.J., Wang, X.P., Kim, E. and Didolkar, V.A. (1996) Cloning and analysis of the genes for polycyclic aromatic hydrocarbon degradation. Ann. N.Y. Acad. Sci. 721, 386398.
  • 28
    Erb, R.W. and Wagner-Döbler, I. (1993) Detection of polychlorinated biphenyl degradation genes in polluted sediments by direct DNA extraction and polymerase chain reaction. Appl. Environ. Microbiol. 59, 40654073.
  • 29
    Takizawa, N., Kaida, N., Torigoe, S., Moritani, T., Sawada, T., Satoh, S. and Kiyohara, H. (1994) Identification and characterization of genes encoding polycyclic aromatic hydrocarbon dioxygenase and polycyclic aromatic hydrocarbon dihydrodiol dehydrogenase in Pseudomonas putida OUS82. J. Bacteriol. 176, 24442449.
  • 30
    Denome, S.A., Stanley, D.C., Olson, E.S. and Young, K.D. (1993) Metabolism of dibenzothiophene and naphthalene in pseudomonas strains: complete DNA sequence of an upper naphthalene catabolic pathway. J. Bacteriol. 175, 68906901.
  • 31
    Dagher, F., Deziel, E., Lirette, P., Paquette, G., Bisaillon, J. and Villemur, R. (1997) Comparative study of five polycyclic aromatic hydrocarbon degrading bacterial strains isolated from contaminated soils. Can. J. Microbiol. 43, 368377.
  • 32
    Whyte, L.G., Greer, W.C. and Inniss, W.E. (1996) Assessment of the biodegradation potential of psychrotrophic microorganisms. Can. J. Microbiol. 42, 99106.
  • 33
    Astuarias, J.A., Diaz, E. and Timmis, K.N. (1995) The evolutionary relationship of biphenyl dioxygenase from gram-positive Rhodococcus globerulus P6 to multikomponent dioxygenases from gram-negative bacteria. Gene 156, 1118.
  • 34
    Walter, U., Beyer, M., Klein, J. and Rehm, H.J. (1991) Degradation of pyrene by Rhodococcus sp. UW1. Appl. Microbiol. Biotechnol. 34, 671676.