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References

  • Agreso Y, Sengelov G & Jensen JB (2004) Development of a rapid method for direct detection of tet (M) genes in soil from Danish farmland. Environ Int 30: 117122.
  • Aleem A & Malik A (2003) Genotoxic hazards of long-term application of wastewater on agricultural soil. Mut Res 538: 145154.
  • Aleem A, Isar J & Malik A (2003) Impact of long-term application of industrial wastewater on the emergence of resistance traits in Azotobacter chroococcum isolated from rhizospheric soil. Biores Tech 86: 713.
  • Alexandrino M (2006) Studies on the mechanisms of bacteria elimination in constructed wetlands. Ph.D. thesis, Umweltmikrobiologie, Technical University, Berlin, Germany.
  • Alexandrino M, Grohmann E & Szewzyk U (2004) Optimization of PCR based methods for rapid detection of pathogens in wastewater samples. Water Res 38: 13401346.
  • Ansari MI & Malik A (2007) Biosorption of nickel and cadmium by metal resistant bacterial isolates from agricultural soil irrigated with wastewater. Biores Tech 98: 31493153.
  • Bale MJ, Day MJ & Fry JC (1988) Novel method for studying plasmid transfer in undisturbed river epilithon. Appl Environ Microbiol 54: 27562758.
  • Böckelmann U, Szewzyk U & Grohmann E (2003) A new enzymatic method for the detachment of particle associated soil bacteria. J Microbiol Methods 55: 201211.
  • Braun B, Böckelmann U, Grohmann E & Szewzyk U (2006) Polyphasic characterization of the bacterial community in an urban soil profile with in situ and culture-dependent methods. Appl Soil Ecol 31: 267279.
  • Datta N & Hughes VM (1983) Plasmids of the same Inc group in enterobacteria before and after the medical use of antibiotics. Nature 306: 616617.
  • D'Costa VM, McGrann KM, Hughes DW & Wright GD (2006) Sampling the antibiotic resistome. Science 311: 374377.
  • Dekker LW & Jungerius PD (1990) Water repellency in the dunes with special reference to the Netherlands. Catena Suppl 18: 173183.
  • Esiobu N, Armenta L & Ike J (2002) Antibiotic resistance in soil and water environments. Int J Environ Health Res 12: 133144.
  • Franiczek R, Dolna I, Krzyzanowska B, Szufnarowski K, Kowalska KB & Zielinska M (2006) Conjugative transfer frequency of resistance genes from ESBL-producing Enterobacteriaceae strains isolated from patients hospitalised in paediatric wards. Med Dosw Mikrobiol 58: 4151.
  • Götz A, Pukall R, Smit E, Tietze E, Prager R, Tschäpe H, Van Elsas JD & Smalla K (1996) Detection and characterization of broad-host-range plasmids in environmental bacteria. Appl Environ Microbiol 62: 26212628.
  • Grohmann E, Guzman LM & Espinosa M (1999) Mobilisation of the streptococcal plasmid pMV158: interactions of MobM protein with its cognate oriT DNA region. Mol Gen Genet 261: 707715.
  • Grohmann E, Muth G & Espinosa M (2003) Conjugative plasmid transfer in gram-positive bacteria. Microbiol Mol Biol Rev 67: 277301.
  • Gstalder M, Faelen M, Mine N, Top EM, Mergeay M & Couturier M (2003) Replication functions of new broad host range plasmids isolated from polluted soils. Res Microbiol 154: 499509.
  • Guardabassi L & Agerso Y (2006) Genes homologous to glycopeptide resistance vanA are widespread in soil microbial communities. FEMS Microbiol Lett 259: 221225.
  • Haines AS, Akhtar P, Stephens ER, Jones K, Thomas CM, Perkins CD, Williams JR, Day MJ & Fry JC (2006) Plasmids from freshwater environments capable of incq retro transfer are diverse and include pQKH54, a new incp-1 subgroup archetype. Microbiology 152: 26892701.
  • Haines AS, Jones K, Batt SM, Kosheleva IA & Thomas CM (2007) Sequence of plasmid pBS228 and reconstruction of the IncP-1alpha phylogeny. Plasmid 58: 7683.
  • Hamscher G, Sczesny S, Hoper H et al. (2002) Determination of persistent tetracycline residues in soil fertilized with liquid manure by HPLC with electro spray ionization tandem mass spectrometry. Anal Chem 74: 15091518.
  • Harada KM, Aso Y, Hashimoto W, Mikami B & Murata K (2006) Sequence and analysis of the 46.6-kb plasmid pA1 from Sphingomonas sp. A1 that corresponds to the typical IncP-beta backbone without any accessory gene. Plasmid 56: 1123.
  • Hoffman C (2002) Schwermetallmobilität und Risikopotentiale der Rieselfeldböden Berlin Buch, Bodenökologie und Bodengenese 35, PhD thesis, TU Berlin, Berlin.
  • Kümmerer K (2004) Resistance in the environment. J Antimicrob Chemother 54: 311320.
  • Lane DJ (1991) 16S/23S rRNA sequencing. Nucleic Acid Techniques in Bacterial Systematics (StackebrandtE & GoodfellowM, eds), pp. 115175. John Wiley & Sons, New York.
  • Malik A & Jaiswal R (2000) Metal resistance in Pseudomonas strains isolated from soil treated with industrial wastewater. World J Microbiol Biotech 16: 177182.
  • Malik A, Khan I & Aleem A (2002) Plasmid incidence in bacteria from agricultural and industrial soils. World J Microbiol Biotech 18: 827833.
  • Nawab A, Aleem A & Malik A (2003) Determination of organochlorine pesticides in agricultural soil with special reference to γ-HCH degradation by Pseudomonas strains. Biores Tech 88: 4146.
  • Nwosu VC (2001) Antibiotic resistance with particular reference to soil microorganisms. Res Microbiol 152: 421430.
  • Patterson AJ, Colangeli R, Spigaglia P & Scott KP (2007) Distribution of specific tetracycline and erythromycin resistance genes in environmental samples assessed by macroarray detection. Environ Microbiol 9: 703715.
  • Riesenfeld CS, Goodman RM & Handelsman J (2004) Uncultured soil bacteria are a reservoir of new antibiotic resistance genes. Environ Microbiol 6: 981989.
  • Sambrook J, Fritsch EF & Maniatis T (1989) Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
  • Schmitt H, Stoob K, Hamscher G, Smit E & Seinen W (2006) Tetracyclines and tetracycline resistance in agricultural soils: microcosm and field studies. Microb Ecol 51: 267276.
  • Silver S (1996) Bacteria resistance to toxic metal ions: review. Gene 179: 919.
  • Smalla K, Heuer H, Götz A, Niemeyer D, Krogerrecklenfort E & Tietze E (2000) Exogenous isolation of antibiotic resistance plasmids from piggery manure slurries reveals a high prevalence and diversity of IncQ-like plasmids. Appl Environ Microbiol 66: 48544862.
  • Smalla K, Haines AS, Jones K, Krogerrecklenfort E, Heuer H, Schloter M & Thomas CM (2006) Increased abundance of IncP-1 (beta) plasmids and mercury resistance genes in polluted river sediments-first discovery of IncP-1 (beta) plasmids with a complex mer transposon as sole accessory element. Appl Environ Microbiol 72: 72537259.
  • Täumer K, Stoffregen H & Wessolek G (2005) Determination of repellency distribution using soil organic matter and water content. Geoderma 125: 107115.
  • Thomas CM (2000) The Horizontal Gene Pool. Bacterial plasmids and gene spread, Harwood Academic Publishers, Amsterdam.
  • Top EM, Van Elsas ED, DeSmet SN & Forney LJ (1998) Enhancement of 2,4-dichlorophenoxyacetic acid (2,4-D) degradation in soil by dissemination of catabolic plasmids. Antonie Van Leuwenhoek 73: 8794.
  • Ward DM, Weller R & Bateson MM (1990) 16S rRNA sequence reveals numerous uncultured microorganisms in a natural community. Nature 345: 6365.
  • Zechner EL, De La Cruz F, Eisenbrandt R, et al. (2000) Conjugative DNA transfer processes. The Horizontal Gene Pool (ThomasCM, ed) pp. 87174. Harwood Academic Publishers, Amsterdam.