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References

  • Alon U (2007) Network motifs: theory and experimental approaches. Nat Rev Genet 8: 450461.
  • Baumbach J, Brinkrolf K, Czaja LF, Rahmann S & Tauch A (2006) CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks. BMC Genomics 7: 24.
  • Brinkrolf K, Brune I & Tauch A (2007) The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum. J Biotechnol 129: 191211.
  • Brune I, Werner H, Hüser AT, Kalinowski J, Pühler A & Tauch A (2006) The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum. BMC Genomics 7: 21.
  • Cohen-Gonsaud M, Keep NH, Davies AP, Ward J, Henderson B & Labesse G (2004) Resuscitation-promoting factors possess a lysozyme-like domain. Trends Biochem Sci 29: 710.
  • Cramer A & Eikmanns BJ (2007) RamA, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to negative autoregulation. J Mol Microbiol Biotechnol 12: 5159.
  • Cramer A, Gerstmeir R, Schaffer S, Bott M & Eikmanns BJ (2006) Identification of RamA, a novel LuxR-type transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum. J Bacteriol 188: 25542567.
  • Cramer A, Auchter M, Frunzke J, Bott M & Eikmanns BJ (2007) RamB, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to regulation by RamA and RamB. J Bacteriol 189: 11451149.
  • Gabrielsen OS, Hornes E, Korsnes L, Ruet A & Oyen TB (1989) Magnetic DNA affinity purification of yeast transcription factor τ a new purification principle for the ultrarapid isolation of near homogeneous factor. Nucleic Acids Res 17: 62536267.
  • Gao B, Paramanathan R & Gupta RS (2006) Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups. Antonie Van Leeuwenhoek 90: 6991.
  • Gerstmeir R, Cramer A, Dangel P, Schaffer S & Eikmanns BJ (2004) RamB, a novel transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum. J Bacteriol 186: 27982809.
  • Hansmeier N, Albersmeier A, Tauch A, Damberg T, Ros R, Anselmetti D, Pühler A & Kalinowski J (2006) The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032. Microbiology 152: 923935.
  • Hartmann M, Barsch A, Niehaus K, Pühler A, Tauch A & Kalinowski J (2004) The glycosylated cell surface protein Rpf 2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum. Arch Microbiol 182: 299312.
  • Keilhauer C, Eggeling L & Sahm H (1993) Isoleucine synthesis in Corynebacterium glutamicum: molecular analysis of the ilvB-ilvN-ilvC operon. J Bacteriol 175: 55955603.
  • Kim HJ, Kim TH, Kim Y & Lee HS (2004) Identification and characterization of glxR, a gene involved in regulation of glyoxylate bypass in Corynebacterium glutamicum. J Bacteriol 186: 34533460.
  • Knoppová M, Phensaijai M, Veselý M, Zemanová M, Nešvera J & Pátek M (2007) Plasmid vectors for testing in vivo promoter activities in Corynebacterium glutamicum and Rhodococcus erythropolis. Curr Microbiol 55: 234239.
  • Kurtz S & Schleiermacher C (1999) REPuter: fast computation of maximal repeats in complete genomes. Bioinformatics 15: 426427.
  • Letek M, Valbuena N, Ramos A, Ordóñez E, Gil JA & Mateos LM (2006) Characterization and use of catabolite-repressed promoters from gluconate genes in Corynebacterium glutamicum. J Bacteriol 188: 409423.
  • Mahne M, Tauch A, Pühler A & Kalinowski J (2006) The Corynebacterium glutamicum gene pmt encoding a glycosyltransferase related to eukaryotic protein-O-mannosyltransferases is essential for glycosylation of the resuscitation promoting factor (Rpf2) and other secreted proteins. FEMS Microbiol Lett 259: 226233.
  • Mukamolova GV, Kaprelyants AS, Young DI, Young M & Kell DB (1998) A bacterial cytokine. Proc Natl Acad Sci USA 95: 89168921.
  • Mukamolova GV, Turapov OA, Kazarian K, Telkov M, Kaprelyants AS, Kell DB & Young M (2002a) The rpf gene of Micrococcus luteus encodes an essential secreted growth factor. Mol Microbiol 46: 611621.
  • Mukamolova GV, Turapov OA, Young DI, Kaprelyants AS, Kell DB & Young M (2002b) A family of autocrine growth factors in Mycobacterium tuberculosis. Mol Microbiol 46: 623635.
  • Mukamolova GV, Kaprelyants AS, Kell DB & Young M (2003) Adoption of the transiently non-culturable state – a bacterial survival strategy? Adv Microb Physiol 47: 65129.
  • Mukamolova GV, Murzin AG, Salina EG, Demina GR, Kell DB, Kaprelyants AS & Young M (2006) Muralytic activity of Micrococcus luteus Rpf and its relationship to physiological activity in promoting bacterial growth and resuscitation. Mol Microbiol 59: 8498.
  • Pappin DJ, Hojrup P & Bleasby AJ (1993) Rapid identification of proteins by peptide-mass fingerprinting. Curr Biol 3: 327332.
  • Perkins DN, Pappin DJ, Creasy DM & Cottrell JS (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20: 35513567.
  • Ravagnani A, Finan CL & Young M (2005) A novel firmicute protein family related to the actinobacterial resuscitation-promoting factors by non-orthologous domain displacement. BMC Genomics 6: 39.
  • Rickman L, Scott C, Hunt DM, Hutchinson T, Menéndez MC, Whalan R, Hinds J, Colston MJ, Green J & Buxton RS (2005) A member of the cAMP receptor protein family of transcription regulators in Mycobacterium tuberculosis is required for virulence in mice and controls transcription of the rpfA gene coding for a resuscitation promoting factor. Mol Microbiol 56: 12741286.
  • Sambrook J, Fritsch E & Maniatis T (1989) Molecular Cloning: Laboratory Manual, 2nd edn. Cold Spring Laboratory Press, Cold Spring Harbor, NY.
  • Telkov MV, Demina GR, Voloshin SA et al. (2006) Proteins of the Rpf (resuscitation promoting factor) family are peptidoglycan hydrolases. Biochemistry (Moscow) 71: 414422.
  • Voloshin SA & Kaprelyants AS (2004) Cell-cell interactions in bacterial populations. Biochemistry (Moscow) 69: 12681275.
  • Wendisch VF, De Graaf AA, Sahm H & Eikmanns BJ (2000) Quantitative determination of metabolic fluxes during coutilization of two carbon sources: comparative analyses with Corynebacterium glutamicum during growth on acetate and/or glucose. J Bacteriol 182: 30883096.