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References

  • Corpet F (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16: 1088110890.
  • Del Pozo J, Crumlish M, Ferguson HW & Turnbull JF (2009) A retrospective cross-sectional study on ‘Candidatus arthromitus’ associated rainbow trout gastroenteritis (RTGE) in the UK. Aquaculture 290: 2227.
  • Goodwin MA, Copper GL, Brown J, Bickford AA, Waltman WD & Dickson TG (1991) Clinical, pathological and epizootiological features of long-segmented filamentous organisms (bacteria, LSFOs) in the small intestines of chickens, turkeys, and qualis. Avian Dis 35: 872876.
  • Kim DH, Brunt J & Austin B (2007) Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss). J Appl Microbiol 102: 16541664.
  • Klaasen HL, Koopman JP, Poelma FG & Beynen AC (1992) Intestinal segmented filamentous bacteria. FEMS Microbiol Rev 88: 165180.
  • Klaasen HL, Koopman JP, Van den Brink ME, Bakker MH, Poelma FG & Beynen AC (1993) Intestinal, segmented, filamentous bacteria in a wide range of vertebrate species. Lab Animal 27: 141150.
  • Langendijl PS, Schut F, Jansen GJ, Raangs GC, Kamphuis GR, Wilkinson MH & Welling GW (1995) Quantitative fluorescence in situ hybridization of Bifidobacterium spp. with genus-specific 16S rRNA-targeted probes and its application in faecal samples. Appl Environ Microb 61: 30693075.
  • Manzano M, Cocolin L, Cantoni C & Comi G (2003) Bacillus cereus, Bacillus thuringiensis and Bacillus mycoides differentiation using a PCR-RE technique. Int J Food Microbiol 81: 249254.
  • Michel C, Bernardet J-F, Daniel P, Chilmonczyk S, Urdaci M & De Kinkelin P (2002) Clinical and aetiological aspects of a summer enteritic syndrome associated with the sporulating segmented filamentous bacterium ‘Candidatus arthromitus’ in farmed rainbow trout, Oncorhynchus mykiss (Walbaum). J Fish Dis 25: 533543.
  • Murray RGE & Stackebrandt E (1995) Taxonomic note: implementation of the provisional status Candidatus for incompletely described prokaryotes. Int J Syst Bacteriol 45: 186187.
  • Muyzer G, De Waal EC & Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microb 59: 695700.
  • Shiina A, Itoi S, Washio S & Sugita H (2006) Molecular identification of intestinal microflora in Takifugu niphobles. Comp Biochem Phys D 1: 128132.
  • Snel J, Heinen PP, Blok HJ, Carman RJ, Duncan AJ, Allen PC & Collins MD (1995) Comparison of 16S rRNA sequences of segmented filamentous bacteria isolated from mice, rats, and chickens and proposal of ‘Candidatus arthromitus. Int J Syst Bacteriol 45: 780782.
  • Spanggaard B, Huber I, Nielsen J, Nielsen T, Appel KF & Gram L (2000) The microflora of rainbow trout intestine: a comparison of traditional and molecular identification. Aquaculture 182: 115.
  • Sugita H, Kurosaki M, Okamura T, Yamamoto S & Tsuchiya C (2005) The culturability of intestinal bacteria of Japanese coastal fish. Fisheries Sci 71: 956958.
  • Urdaci MC, Regnault B & Grimont PAD (2001) Identification by in situ hybridization of segmented filamentous bacteria in the intestine of diarrheic rainbow trout (Oncorhynchus mykiss). Res Microbiol 152: 6773.