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Supporting Information

Additional Supporting Information may be found in the online version of this article:

Figure S1: Narrowing of QTL intervals in integrated analyses. (a) Integrated, F2 and F8 Act1 QTL results during 0–5 min. (b) Integrated, F2 and F8 day 1 QTL results for Act4 QTL during 5–10 min. (c) Integrated, F2 and F8 ActX QTL results during 0–5 min. (d) Integrated, F2 and F8 Meth9 QTL results during 10–15 min. (e) Integrated, F2 and F8 Meth15 QTL results during 0–5 min. (f) Integrated, F2 and F8 Meth9 QTL results during 10–15 min.

Table S1: eQTLs for Act1, Act4, ActX, Meth9, Meth15 and Meth16. Table includes gene symbol and name, as well as Mb location for each gene, mean expression, maximum LOD, and eQTL chromosome and Mb location

Table S2: Genes with nonsynonymous coding SNPs for Act1, Act4, ActX, Meth9, Meth15 and Meth16. Gene symbol and the number of nonsynonymous SNPs are shown. SNPs resulting in a frameshift mutation, stop-gain, stop-loss and SNPs located in essential splice sites are indicated with an asterisk

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