The right relevé in the right vegetation unit: a new typicality index to reproduce expert judgement with an automatic classification programme
Version of Record online: 21 SEP 2011
© 2011 International Association for Vegetation Science
Journal of Vegetation Science
Volume 23, Issue 1, pages 24–32, February 2012
How to Cite
Gégout, J.-C., Coudun, C. (2012), The right relevé in the right vegetation unit: a new typicality index to reproduce expert judgement with an automatic classification programme. Journal of Vegetation Science, 23: 24–32. doi: 10.1111/j.1654-1103.2011.01337.x
- Issue online: 9 JAN 2012
- Version of Record online: 21 SEP 2011
- Manuscript Accepted: 27 JUL 2011
- Manuscript Received: 13 JUL 2010
- EcoPlant database;
- Fidelity measure;
- Natura 2000;
- Sophy database;
- Vegetation relevé
How to classify forest vegetation relevés automatically in the traditional phytosociological system and thus distinguish typical relevés – easier to classify – from relevés with non-diagnostic species and intermediate relevés?
A data set of 11 324 forest vegetation relevés, including 4880 relevés classified a priori by experts in phytosociology down to the association level (100 associations in 30 alliances and ten classes, covering all forest vegetation and environmental conditions encountered in France).
A new typicality index was formalized to quantify the probability of automatically classifying a given relevé in the same vegetation unit as would do an expert in phytosociology. Computation of the typicality index is based on two parameters: a level of affinity linked to the number of diagnostic species of the vegetation unit present in the relevé, and a level of differentiation that is greater when the risk of confusion in classification of the relevé between different units is smaller.
The automatic classification was identical to expert judgement for 60% of the 4080 calibration relevés. The typicality index isolated atypical relevés that are more difficult to classify. The model was successfully transferred to classify an independent data set of 6444 relevés from the French National Forest Inventory performed in 2008 and to distinguish 1114 (17%) typical relevés of phytosociological associations.
Interest in this new typicality index is manifold. It is: (1) operational for the current phytosociological system that forms the basis of the Natura 2000 system; (2) easy to implement from characteristics of species and communities; and (3) based on criteria of uncertainty used by phytosociological experts. This study establishes a clear bridge between recent works on collecting, storing and analysing vegetation relevés, on one hand, and the traditional phytosociological approach, on the other. It should trigger further studies on the spatial and temporal distribution of European habitats.