Community-acquired respiratory viruses and co-infection among patients of Ontario sentinel practices, April 2009 to February 2010
Version of Record online: 9 AUG 2012
© 2012 John Wiley & Sons Ltd
Influenza and Other Respiratory Viruses
Volume 7, Issue 4, pages 559–566, July 2013
How to Cite
Peci, A., Winter, A.-L., Gubbay, J. B., Skowronski, D. M., Balogun, E. I., De Lima, C., Crowcroft, N. S. and Rebbapragada, A. (2013), Community-acquired respiratory viruses and co-infection among patients of Ontario sentinel practices, April 2009 to February 2010. Influenza and Other Respiratory Viruses, 7: 559–566. doi: 10.1111/j.1750-2659.2012.00418.x
- Issue online: 11 JUN 2013
- Version of Record online: 9 AUG 2012
- Accepted 30 June 2012. Published online 9 August 2012.
- 2009 pandemic H1N1;
- respiratory viruses
Please cite this paper as: Peci et al. (2012) Community-acquired respiratory viruses and co-infection among patients of Ontario Sentinel practices, April 2009 to February 2010. Influenza and Other Respiratory Viruses 7(4), 559–566.
Background Respiratory viruses are known to cocirculate but this has not been described in detail during an influenza pandemic.
Objectives To describe respiratory viruses, including co-infection and associated attributes such as age, sex or comorbidity, in patients presenting with influenza-like illness to a community sentinel network, during the pandemic A(H1N1)pdm09 in Ontario, Canada.
Methods Respiratory samples and epidemiologic details were collected from 1018 patients with influenza-like illness as part of respiratory virus surveillance and a multiprovincial case–control study of influenza vaccine effectiveness.
Results At least one virus was detected in 668 (65·6%) of 1018 samples; 512 (50·3%) had single infections and 156 (15·3%) co-infections. Of single infections, the most common viruses were influenza A in 304 (59·4%) samples of which 275 (90·5%) were influenza A(H1N1)pdm09, and enterovirus/rhinovirus in 149 (29·1%) samples. The most common co-infections were influenza A and respiratory syncytial virus B, and influenza A and enterovirus/rhinovirus. In multinomial logistic regression analyses adjusted for age, sex, comorbidity, and timeliness of sample collection, single infection was less often detected in the elderly and co-infection more often in patients <30 years of age. Co-infection, but not single infection, was more likely detected in patients who had a sample collected within 2 days of symptom onset as compared to 3–7 days.
Conclusions Respiratory viral co-infections are commonly detected when using molecular techniques. Early sample collection increases likelihood of detection of co-infection. Further studies are needed to better understand the clinical significance of viral co-infection.