• 1
    Wydrzynski, T. and K. Satoh (2006) Photosystem II: the light-driven water-plastoquinone-oxidoreductase. Advances in photosynthesis and respiration Springer-Verlag, Dordrecht, The Netherlands. 786 pp.
  • 2
    Umena, Y., K. Kawakami, J.-R. Shen and N. Kamiya (2011) Crystal structure of oxygen-evolving photosystem II at 1.9 Å resolution. Nature 473, 5560.
  • 3
    Rappaport, F. and B. A. Dinner (2008) Primary photochemistry and energetics leading to the oxidation of the Mn4Ca cluster and to the evolution of molecular oxygen in photosystem II. Coord. Chem. Rev. 252, 259272.
  • 4
    Ishikita, H., K. Hasagewa and T. Nogushi (2011) How does the QB site influence propagate to the QA site in photosystem II? Biochemistry 50, 54365442.
  • 5
    Dekker, J. P. and R. Van Grondelle (2000) Primary charge separation in photosystem II. Photosynth. Res. 63, 195208.
  • 6
    Diner, B. A. and G. T. Babcock (1996) Structure, dynamics, and energy conversion efficiency in photosystem II. In Oxygenic Photosynthesis: The Light Reactions (Edited by D. R. Ort and C. F. Yocum), pp. 213247. Kluwer Academic Publishers, Dordrecht, The Netherlands.
  • 7
    Dau, H. and M. Haumann (2009) Principles, efficiency and blueprint character of solar energy conversion in photosynthetic water oxidation. Acc. Chem. Res. 42, 18611870.
  • 8
    Gauthier, A., D. Joly, S. Boisvert and R. Carpentier (2010) Period-four modulation of photosystem II primary quinone acceptor (QA) reduction/oxidation kinetics in thylakoid membranes. Photochem. Photobiol. 86, 10641070.
  • 9
    Renger, G. (2001) Photosynthetic water oxidation to molecular oxygen: apparatus and mechanism. Biochim. Biophys. Acta 1503, 210228.
  • 10
    Kawakami, K, Y. Umena, N. Kamiya and J.-R. Shen (2011) Structure of the catalytic, inorganic core of oxygen-evolving photosystem II at 1.9 Å resolution. J. Photochem. Photobiol. B 104, 918.
  • 11
    Sproviero, E. M., J. A. Gascon, J. P. McEvoy, G. W. Brudvig and V. S. Batista (2008) Quantum mechanics/molecular mechanics study of the catalytic site of water splitting in photosystem II. J. Am. Chem. Soc. 130, 34283442.
  • 12
    Renger, G. (2011) Light induced oxidative water splitting in photosynthesis; energetics, kinetics and mechanism. J. Photochem. Photobiol. B 104, 3543.
  • 13
    Dekker, J. P., J. J. Plijter, L. Ouwehand and H. J. Van Gorkom (1984) Kinetics of manganese redox transitions in the oxygen-evolving apparatus of photosynthesis. Biochim. Biophys. Acta 767, 176179.
  • 14
    Ducruet, J. M. (2003) Chlorophyll thermoluminescence of leaf discs: simple instruments and progress in signal interpretation open the way to new ecophysiological indicators. J Exp Bot 54, 24192430.
  • 15
    Vass, I. and Govindjee (1996) Thermoluminescence from the photosynthetic apparatus. Photosynth. Res. 48, 117126.
  • 16
    Sane, P. V. (2004) Thermoluminescence: a technique for probing photosystem II. In Photosynthesis Research Protocols (Edited by R. Carpentier), pp. 229248. Humana Press, Totova, New Jersey.
  • 17
    Desai, T. S., S. S. Rane, V. G. Tatake and P. V. Sane (1983) Identification of far-red-induced relative increase in the decay of delayed light emission from photosynthetic membranes with thermoluminescence peak V appearing at 321 K. Biochim. Biophys. Acta 724, 485489.
  • 18
    Bertch, W. F. and J. R. Azzi (1965) A relative maximum in the decay of long-term delayed light emission from the photosynthetic apparatus. Biochim. Biophys. Acta 94, 1526.
  • 19
    Björn, L. O. (1971) Far-red induced, long-lived afterglow from photosynthetic cells. Size of afterglow unit and plants energy accumulation and dissipation. Photochem. Photobiol. 13, 520.
  • 20
    Sunbald, L.-G., W. P. Schröder and H.-E. Åkerlund (1989) S-state distribution and redox state of QA, in relation to luminescence decay kinetics. Biochim. Biophys. Acta 973, 4752.
  • 21
    Hideg, E., M. Kobayashi and H. Inaba (1991) The far-red induced slow component of delayed light from chloroplasts is emitted from photosystem II. Photosynth. Res. 29, 107112.
  • 22
    Miranda, T. and J. M. Ducruet (1995) Characterization of the chlorophyll thermoluminescence afterglow in dark-adapted or far-red-illuminated plant leaves. Plant Physiol. Biochem. 33, 689699.
  • 23
    Ducruet, J. M., M. Roman, J. M. Ortega and T. Janda (2005) Role of the oxidized secondary acceptor QB of photosystem II in the delayed afterglow chlorophyll liminescence. Photosynth. Res. 84, 161166.
  • 24
    Krieger, A., S. Bolte, K. J. Dietz and J. M. Ducruet (1998) Thermoluminescence studies on the facultative crassulacean-acid-metabolism plant Mesembryanthemum crystallinum L. Planta 205, 587594.
  • 25
    Ducruet, J. M., M. Roman, M. Havaux, T. Janda and A. Gallais (2005) Cyclic electron flow around PSI monitored by afterglow luminescence in leaves of maize inbred lines (Zea mayz L.): correlation with chilling tolerance. Planta 221, 567579.
  • 26
    Havaux, M., D. Rumeau and J. M. Ducruet (2005) Probing the FQR and NDH activities in cyclic electron transport around photosystem I by the afterglow luminescence. Biochim. Biophys. Acta 1709, 203213.
  • 27
    Ducruet, J. M., A. Serrano, M. Roncel and J. M. Ortega (2011) Peculiar properties of chlorophyll thermoluminescence emission of autotrophycally or mixotrophycally grown Chlamydomonas reinhardtii. J. Photochem. Photobiol. B 104, 301307.
  • 28
    Joly, D. and R. Carpentier (2011) Rapid isolation of intact chloroplasts from spinach leaves. In Photosynthesis Research Protocols (Edited by R. Carpentier), pp. 321325. Springer, New York.
  • 29
    Porra, R. J., W. A. Thompson and P. E. Kriedemann (1989) Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophyll a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy. Biochim. Biophys. Acta 975, 384394.
  • 30
    Joly, D., C. Bigras, J. Harnois, S. Govindachary and R. Carpentier (2005) Kinetic analyses of the OJIP chlorophyll fluorescence rise in thylakoid membranes. Photosynth. Res. 84, 107112.
  • 31
    Joly, D. and R. Carpentier (2009) Sigmoidal reduction kinetics of the photosystem II acceptor side in intact photosynthetic during fluorescence induction. Photochem. Photobiol. Sci. 8, 167173.
  • 32
    Klughammer, C. and U. Schreiber (1998) Measuring P700 absorbance changes in the near infrared spectral region with a dual wavelength pulse modulation system. In Photosynthesis: Mechanisms and Effects (Edited by G. Garab), pp. 43574360. Kluwer Academic Publishers, Dordrecht, The Netherlands.
  • 33
    Gauthier, A., S. Govindachary, J. Harnois and R. Carpentier (2006) Interaction of N,N,N′,N′-tetramethyl-p-phenylenediamine with photosystem II as revealed by thermoluminescence: reduction of the higher oxidation states of the Mn cluster and displacement of plastoquinone from the QB niche. Biochim. Biophys. Acta 1757, 15471556.
  • 34
    Ducruet, J. M. and T. Miranda (1992) Graphical and numerical analysis of thermoluminescence and fluorescence Fo emission in photosynthetic material. Photosynth. Res. 33, 1527.
  • 35
    Strasser, R. J. and Govindjee (1992) On the O-J-I-P fluorescence transients in leaves and D1 mutants of Chlamydomonas reinhardtii. In Research in Photosynthesis (Edited by N. Murata), pp. 2332. Kluwer Academic Publishers, Dordrecht, The Netherlands.
  • 36
    Joly, D. and R. Carpentier (2007) The oxidation/reduction kinetics of the plastoquinone pool controls the appearance of the I-peak in the O-J-I-P chlorophyll fluorescence rise: effects of various electron acceptors. J. Photochem. Photobiol. B 88, 4350.
  • 37
    Joly, D., E. Jemâa and R. Carpentier (2010) Redox state of the photosynthetic electron transport chain in wild-type and mutant leaves of Arabidopsis thaliana: impact on photosystem II fluorescence. J. Photochem. Photobiol. B 98, 180187.
  • 38
    Joliot, P. and A. Joliot (2006) Cyclic electron flow in C3 plants. Biochim. Biophys. Acta 1757, 362368.
  • 39
    Bukhov, N., S. Govindachary, S. Rajagopal, D. Joly and R. Carpentier (2004) Enhanced rates of P700+ dark-reduction in leaves of Cucumis sativus L. photoinhibited at chilling temperature. Planta 218, 852861.
  • 40
    Vassiliev, I. R., M. L. Antonkine and J. H. Golbeck (2001) Iron-sulfur clusters in type I reaction centers. Biochim. Biophys. Acta 1507, 139160.
  • 41
    Govindachary, S., C. Bigras, J. Harnois, D. Joly and R. Carpentier (2007) Changes in the mode of electron changes in the mode of electron flow to photosystem I following chilling-induced photoinhibition in a C3 plant, Cucumis sativus L. Photosynth. Res. 94, 333345.
  • 42
    Shikanai, T., T. Endo, T. Hashimoto, Y. Yamada, K. Asada and A. Yokota (1998) Directed disruption of the tobacco ndhB gene impairs cyclic electron flow around photosystem I. Proc. Natl Acad. Sci. USA 95, 97059709.
  • 43
    Kofer, W., H. U. Koop, G. Wanner and K. Steinmüller (1998) Mutagenesis of the genes encoding subunits A, C, H, I, J and K of the plastid NAD(P)H-plastoquinone-oxidoreductase in tobacco by polyethylene glycol-mediated plastome transformation. Mol. Gen. Genet. 258, 166173.
  • 44
    Burrows, P. A., L. A. Sazanov, Z. Svab, P. Maliga and P. J. Nixon (1998) Identification of a functional respiratory complex in chloroplasts through analysis of tobacco mutants containing disrupted plastid ndh genes. EMBO J. 17, 868876.
  • 45
    Endo, T., T. Shikanai, F. Sato and K. Asada (1998) NAD(P)H dehydrogenase-dependent, antimycin A-sensitive electron donation to plastoquinone in tobacco chloroplasts. Plant Cell Physiol. 39, 12261231.
  • 46
    Bukhov, N. and R. Carpentier (2004) Alternative photosystem-I driven electron transport routes: mechanisms and functions. Photosynth. Res. 82, 1723.
  • 47
    Sajnani, C., J. L. Zurita, M. Roncel, J. M. Ortega, M. Baron and J. M. Ducruet (2007) Changes in photosynthetic metabolism induced by tobamovirus infection in Nicotiana benthamiana studied in vivo by thermoluminescence. New Phytol. 175, 120130.
  • 48
    Roncel, M and J. M. Ortega (2005) Afterglow thermoluminescence band as possible early indicator of changes in the photosynthetic electron transport in leaves. Photosynth. Res. 84, 167172.