Evaluation of mitochondrial genes as DNA barcode for Basidiomycota
Article first published online: 21 APR 2009
© 2009 Blackwell Publishing Ltd and Crown in the right of Canada
Molecular Ecology Resources
Special Issue: Special Issue on Barcoding Life
Volume 9, Issue Supplement s1, pages 99–113, May 2009
How to Cite
VIALLE, A., FEAU, N., ALLAIRE, M., DIDUKH, M., MARTIN, F., MONCALVO, J.-M. and HAMELIN, R. C. (2009), Evaluation of mitochondrial genes as DNA barcode for Basidiomycota. Molecular Ecology Resources, 9: 99–113. doi: 10.1111/j.1755-0998.2009.02637.x
- Issue published online: 21 APR 2009
- Article first published online: 21 APR 2009
- Received 31 October 2008; revision received 26 January 2009; accepted 30 January 2009
Fig. S1 Nucleotidic alignments obtained for 14 mitochondrial genes encoding subunits of the respiratory chain complexes. The sequences were obtained from available Basidiomycete genomic resources as detailed in the Material and methods section.
Fig. S2 Dendrograms constructed with the neighbour-joining algorithm based on the K2P distance matrices of the ITS, 28S, CO1, atp6, CO3 and nad6 nucleotidic-sequence alignment for the Melampsora and the Chrysomyxa data sets.
Fig. S3G + C content comparisons between the nuclear and mitochondrial contigs considered in this study. (A) Plot of the G + C content of each contig (nuclear and mitochondrial) considered in the genome assemblies; (B) Box plot of G + C content in mitochondrial and nuclear contigs considered in the genome assemblies.
Table S1 Information about Chrysomyxa and Melampsora specimens used in this study
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Please note: Wiley Blackwell is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.