Generic genetic differences between farmed and wild Atlantic salmon identified from a 7K SNP-chip
Article first published online: 17 FEB 2011
© 2011 Blackwell Publishing Ltd
Molecular Ecology Resources
Special Issue: SNP Development in Non-Model Organisms
Volume 11, Issue Supplement s1, pages 247–253, March 2011
How to Cite
KARLSSON, S., MOEN, T., LIEN, S., GLOVER, K. A. and HINDAR, K. (2011), Generic genetic differences between farmed and wild Atlantic salmon identified from a 7K SNP-chip. Molecular Ecology Resources, 11: 247–253. doi: 10.1111/j.1755-0998.2010.02959.x
- Issue published online: 17 FEB 2011
- Article first published online: 17 FEB 2011
- Received 27 August 2010; revision received 18 November 2010; accepted 18 November 2010
Fig. S1 Average proportion, across 13 wild populations, of correctly assigned individuals of Atlantic salmon as of farm or wild origin for different number of loci, based on one set of SNPs identified from FST estimates between a pool of wild and a pool of farm populations (black circles), and 13 different sets of SNPs, each generated from from FST estimates between a pool of wild and a pool of farm population, where one by one wild population were excluded (white diamonds).
Fig. S2 Allele frequencies in wild populations (white bars) and farmed populations (black bars) at the top four ranked loci discriminating between farmed and wild salmon.
Table S1 Single nucleotide polymorphism id (SNP-id) and their corresponding NCBI assay ID (ss#) in the NCBI, dbSNP database, ranked according to their performance in discriminating between farm and wild Atlantic salmon.
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