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Correlative microscopy for phylogenetic and ultrastructural characterization of microbial communities

  1. Bernhard Knierim1,†,
  2. Birgit Luef1,2,†,
  3. Paul Wilmes2,‡,
  4. Richard I. Webb4,
  5. Manfred Auer1,
  6. Luis R. Comolli1,*,
  7. Jillian F. Banfield2,3,*

Article first published online: 22 AUG 2011

DOI: 10.1111/j.1758-2229.2011.00275.x

Issue

Environmental Microbiology Reports

Environmental Microbiology Reports

Thematic issue: Taxonomy and Biodiversity

Volume 4, Issue 1, pages 36–41, February 2012

Additional Information

How to Cite

Knierim, B., Luef, B., Wilmes, P., Webb, R. I., Auer, M., Comolli, L. R. and Banfield, J. F. (2012), Correlative microscopy for phylogenetic and ultrastructural characterization of microbial communities. Environmental Microbiology Reports, 4: 36–41. doi: 10.1111/j.1758-2229.2011.00275.x

Author Information

  1. 1

    Lawrence Berkeley National Laboratory, Life Sciences Division, Berkeley, CA, USA.

  2. 2

    Department of Earth and Planetary Science

  3. 3

    Department of Environmental Science, Policy and Management, University of California, Berkeley, Berkeley, CA, USA.

  4. 4

    Centre for Microscopy and Microanalysis (CMM), The University of Queensland, St. Lucia, Queensland, Australia.

  1. ‡

    Present address: Centre de Recherche Public – Gabriel Lippmann, and Luxembourg Center for Systems Biomedicine, University of Luxembourg, Belvaux, Grand-Duchy of Luxembourg.

  2. †

    Contributed equally to this work.

* E-mail lrcomolli@lbl.gov; Tel. 510 643 2155; Fax 510 643 9980;
E-mail jbanfield@berkeley.edu; Tel. 510 486 6437; Fax 510 486 6488.

  1. ‡

    Present address: Centre de Recherche Public – Gabriel Lippmann, and Luxembourg Center for Systems Biomedicine, University of Luxembourg, Belvaux, Grand-Duchy of Luxembourg.

  2. †

    Contributed equally to this work.

  3. Author contributions: B.K., B.L., P.W., R.I.W., M.A., L.R.C. and J.F.B. designed the research; B.K., B.L., P.W. and R.I.W. developed and performed the CARD-FISH; B.L. and L.R.C. cultured Caulobacter crescentus and B.L. prepared AMD biofilm samples; B.K., P.W. and R.I.W. prepared the resin samples and B.K. carried out the resin section transmission electron microscopy; B.L. and L.R.C. prepared the cryogenic samples and did the cryogenic electron microscopy; B.L. performed the electron dose calibration and optimization; B.K., B.L. and P.W. performed the fluorescence microscopy and confocal laser scanning microscopy; B.K., B.L. and L.R.C. prepared the figures; B.K., B.L., L.R.C. and J.F.B. prepared the manuscript. All authors contributed to the manuscript.

Publication History

  1. Issue published online: 7 FEB 2012
  2. Article first published online: 22 AUG 2011
  3. Received 13 April, 2011; accepted 18 June, 2011.

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View Full Article with Supporting Information (HTML) Get PDF (581K)