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References

  • Atlin, G.N., McRae, K.B. & Lu, X. 2000. Genotype X region interaction for two-row barley yield in Canada. Crop Sci. 40: 16.
  • Badr, A., Müller, K., Schäfer-Pregl, R., El Rabey, H., Effgen, S., Ibrahim, H.H. et al. 2000. On the origin and domestication history of Barley (Hordeum vulgare). Mol. Biol. Evol. 17: 499510.
  • Bergelson, J. & Roux, F. 2010. Towards identifying genes underlying ecologically relevant traits in Arabidopsis thaliana. Nat. Rev. Genet. 11: 867879.
  • Burrough, P.A. & Mcdonnell, R.A. 1998. Principles of Geographical Information Systems. Oxford University Press, Oxford, UK.
  • Caldwell, K.S., Russell, J., Langridge, P. & Powell, W. 2006. Extreme population-dependent linkage disequilibrium detected in an inbreeding plant species, Hordeum vulgare. Genetics 172: 557567.
  • Charlesworth, B., Nordborg, M. & Charlesworth, D. 1997. The effects of local selection, balanced polymorphism and background selection on equilibrium patterns of genetic diversity in subdivided populations. Genet. Res. 70: 155174.
  • Clarke, K.R. 1993. Non-parametric multivariate analyses of changes in community structure. Aust. J. Ecol. 59: 117143.
  • Craufurd, P.Q. & Wheeler, T.R. 2009. Climate change and the flowering time of annual crops. J. Exp. Bot. 60: 25292539.
  • Dieringer, D. & Schlötterer, C. 2003. Microsatellite analyser (MSA): a platform independent analysis tool for large microsatellite data sets. Mol. Ecol. Notes 3: 167169.
  • Ellis, R.P., Forster, B.P., Robinson, D., Handley, L.L., Gordon, D.C., Russell, J.R. et al. 2000. Wild barley: a source of genes for crop improvement in the 21st century? Plant Mol. Biol. 51: 917.
  • Ellstrand, N.C. 2003. Current knowledge of gene flow in plants: implications for transgene flow. Phil. Trans. R Soc. Lond. 24: 217242.
  • Ellstrand, N.C. & Elam, D.R. 1993. Population genetics consequences of small population size: implications for plant conservation. Ecology 24: 217242.
  • Endler, J.A. 1986. Natural Selection in the Wild. Princeton University Press, Princeton, NJ.
  • Fraley, C. & Raftery, A.E. 2007. Model-based methods of classification: using the mclust software in chemometrics. J. Stat. Softw. 18: 113.
  • Friendly, M. 2002. Corrgrams: exploratory displays for correlation matrices. Am. Stat. 56: 316324.
  • Ghalambor, C.K., McKay, J.K., Carroll, S.P. & Reznick, D.N. 2007. Adaptive versus non-adaptive phenotypic plasticity and the potential for contemporary adaptation in new environments. Funct. Ecol. 21: 394407.
  • Goudet, J. & Büchi, L. 2006. The effects of dominance, regular inbreeding and sampling design on QST, an estimator of population differentiation for quantitative traits. Genetics 172: 13371347.
  • Harlan, R. & Zohary, D. 1966. Distribution of wild wheats and barley. Science 153: 10741080.
  • Haseneyer, G., Stracke, S., Piepho, H.P., Sauer, S., Geiger, H.H. & Graner, A. 2010. DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits. BMC Plant Biol. 10: 5.
  • Hübner, S., Höffken, M., Oren, E., Haseneyer, G., Stein, N., Graner, A. et al. 2009. Strong correlation of wild barley (Hordeum spontaneum) population structure with temperature and precipitation variation. Mol. Ecol. 18: 15231536.
  • Hübner, S., Günther, T., Flavell, A., Fridman, E., Graner, A., Korol, A. et al. 2012. Islands and streams: clusters and gene flow in wild barley populations from the Levant. Mol. Ecol. 21: 1151129.
  • Hughes, A.L. 2011. Evolution of adaptive phenotypic traits without positive Darwinian selection. Heredity 108: 347353.
  • Jana, S. & Pietrzak, L.N. 1988. Comparative assessment of genetic diversity in wild and primitive cultivated barley in a center of diversity. Genetics 119: 981990.
  • Kilian, B., Ozkan, H., Koh., J., von Haeseler, A., Barale, F., Deusch, O. et al. 2006. Haplotype structure at seven barley genes: relevance to gene pool bottlenecks, phylogeny of ear type and site of barley domestication. Mol. Genet. Genomics 276: 230241.
  • Korol, A.B., Ronin, Y.I., Tadmor, Y., Bar-Zur, A., Kirzhner, V.M. & Nevo, E. 1996. Estimating variance effect of QTL: an important prospect to increase the resolution power of interval mapping. Genet. Res. 67: 187194.
  • Lande, R. 1976. Natural selection and random genetic drift in phenotypic evolution. Evolution 30: 314334.
  • Lunn, D.J., Thomas, A., Best, N. & Spiegelhalter, D. 2000. winbugs – A Bayesian modeling framework: concepts, structure, and extensibility. Stat. Comput. 4: 325337.
  • Mano, Y., Kawasaki, S., Takaiwa, F. & Komatsuda, T. 2001. Construction of a genetic map of barley (Hordeum vulgare L.) cross “Azumamugi” × “Kanto Nakate Gold” using a simple and efficient amplified fragment-length polymorphism system. Genome 44: 284292.
  • Merilä, J. & Crnokrak, P. 2001. Comparison of genetic differentiation at marker loci and quantitative traits. J. Evol. Biol. 14: 892903.
  • Morrell, P.L., Toleno, D.M., Lundy, K.E. & Clegg, M.T. 2005. Low levels of linkage disequilibrium in wild barley (Hordeum vulgare ssp. spontaneum) despite high rates of self-fertilization. Proc. Natl Acad. Sci. USA 102: 24422447.
  • Nevo, E. 1992. Origin, evolution, population genetics and resources for breeding of wild barley, Hordeum spontaneum, in the Fertile Crescent. In: Barley: Genetics, Biochemistry, Molecular Biology and Biotechnology (P.R. Shewry, ed.), pp. 1943. C.A.B. International, Alden Press, Oxford.
  • Nevo, E. 1998. Genetic diversity in wild cereals: regional and local studies and their bearing on conservation ex situ and in situ. Genet. Resour. Crop Evol. 45: 355370.
  • Nevo, E., Beiles, A., Yitzchak, G., Storch, N. & Kaplan, D. 1984. Genetic resources of wild cereals in Israel and vicinity. II. Phenotypic variation within and between populations of wild barley, Hordeum spontaneum. Euphytica 33: 737756.
  • Nordborg, M., Hu, T.T., Ishino, Y., Jhaveri, J., Toomajian, C., Zheng, H. et al. 2005. The pattern of polymorphism in Arabidopsis thaliana. PLoS Biol. 3: 12891299.
  • O'Hara, R.B. & Merilä, J. 2005. Bias and precision in QST estimates: problems and some solutions. Genetics 171: 13311339.
  • Oksanen, A.J., Kindt, R., Legendre, P., Hara, B.O., Simpson, G.L., Stevens, M.H.H. et al. 2008. The vegan Package. http://cran.r-project.org/
  • Palo, J.U., O'Hara, R.B., Laugen, A.T., Laurila, A., Primmer, C.R. & Merilä, J. 2003. Latitudinal divergence of common frog (Rana temporaria) life history traits by natural selection: evidence from a comparison of molecular and quantitative genetic data. Mol. Ecol. 12: 19631978.
  • Ritland, K. 2000. Marker-inferred relatedness as a tool for detecting heritability in nature. Mol. Ecol. 9: 11951204.
  • Rizopoulos, D. 2006. ltm: an r package for latent variable modeling and item response theory analyses. J. Stat. Softw. 17: 125.
  • Salamini, F., Ozkan, H., Brandolini, A., Schäfer-Pregl, R. & Martin, W. 2002. Genetics and geography of wild cereal domestication in the Near East. Nat. Rev. Genet. 3: 429441.
  • Schmidt, P.S., Serräo, E.A., Pearson, G.A., Riginos, C., Rawson, P.D., Hilbish, T.J. et al. 2008. Ecological genetics in the North Atlantic: environmental gradients and adaptation at specific loci. Ecology 89: 91107.
  • Spitze, K. 1993. Population structure in Daphnia obtusa: quantitative genetic and allozymic variation. Genetics 135: 367374.
  • Talamè, V., Sanguineti, M.C., Chiapparino, E., Bahri, H., Ben Salem, M., Forster, B.P. et al. 2004. Identification of Hordeum spontaneum QTL alleles improving field performance of barley grown under rainfed conditions. Ann. Appl. Biol. 144: 309319.
  • Thiel, T., Michalek, W., Varshney, R.K. & Graner, A. 2003. Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor. Appl. Genet. 106: 411422.
  • Turelli, M. 1988. Phenotypic evolution, constant covariance, and the maintenance of additive variance. Evolution 42: 13421347.
  • Ullrich, S.E. 2011. Barley: Production, Improvement, and Uses. Wiley-Blackwell, Oxford, UK.
  • Verhoeven, K.J.F., Poorter, H., Nevo, E. & Biere, A. 2008. Habitat-specific natural selection at a flowering-time QTL is a main driver of local adaptation in two wild barley populations. Mol. Ecol. 17: 34163424.
  • Volis, S. 2011. Adaptive genetic differentiation in a predominantly self-pollinating species analyzed by transplanting into natural environment, crossbreeding and Q(ST)-F(ST) test. New Phytol. 192: 237248.
  • Volis, S., Mendlinger, S. & Ward, D. 2002. Differentiation in populations of Hordeum spontaneum along a gradient of environmental productivity and predictability: life history and local adaptation. Biol. J. Linn. Soc. 77: 479490.
  • Volis, S., Yakubov, B., Shulgina, I., Ward, D. & Mendlinger, S. 2005. Distinguishing adaptive from nonadaptive genetic differentiation: comparison of QST and FST at two spatial scales. Heredity 95: 466475.
  • Waugh, A., Jannink, J.L., Muehlbauer, G.J. & Ramsay, L. 2009. The emergence of whole genome association scans in barley. Curr. Opin. Plant Biol. 12: 218222.
  • Weir, B.S. & Cockerham, C.C. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38: 13581370.
  • Whitlock, M.C. & Guillaume, F. 2009. Testing for spatially divergent selection: comparing QST to FST. Genetics 183: 10551063.
  • Wright, S. 1943. Isolation by distance. Genetics 28: 114138.
  • Zamir, D. 2001. Improving plant breeding with exotic genetic libraries. Nat. Rev. Genet. 2: 983989.