mec12011-sup-0001-FigS1.pdfapplication/PDF44KFig. S1 Influence of genomic features on SNP distributions.
mec12011-sup-0002-FigS2.pdfapplication/PDF307KFig. S2 Autocorrelation (Moran's I) analysis for all 19 Populus chromosomes (drawn to scale) based on the proportion of SNPs fixed between species.
mec12011-sup-0003-TableS1.xlsxapplication/msexcel11KTable S1 RAD sequencing results for 14 samples of Populus alba and P. tremula.
mec12011-sup-0004-TableS2.xlsapplication/msexcel30KTable S2 Thirty-two microsatellite loci (‘Locus’) with detailed information on genomic location of each marker (Chr, chromosome; Pos, location of the locus in base pairs on the chromsome).
mec12011-sup-0005-TableS3.xlsxapplication/msexcel81KTable S3 Introgress analyses are based on data from 32 microsatellite loci (‘locus’).
mec12011-sup-0006-TableS4.xlsxapplication/msexcel7448KTable S4 Details on 38 525 SNPs passing quality control.
mec12011-sup-0007-TableS5.xlsxapplication/msexcel535KTable S5 We report windowed statistics for the reference genome of Populus trichocarpa and the reference mapped SNPs obtained from RAD sequencing.
mec12011-sup-0008-TableS6.xlsxapplication/msexcel10KTable S6 Pair-wise Pearson correlation coefficients between windowed (non-overlapping windows sized 100 kb, Table S5, Supporting information) estimates of differentiation between the genomes of Populus alba and P. tremula, and windowed genomic features affecting SNP distributions: average FST (avgFST), number of fixed SNPs (fixed), number of variable SNPs (variable), number of SNPs/100 kb (density), proportion of fixed over informative SNPs (fixratio), fraction of repetitive DNA elements (repfract), ratio of GC basepairs (gcratio), and fraction of ambiguous (non-ACGT) basepairs (xratio).

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