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  1. 1
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  2. 2
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  3. 3
    Ron I. Eytan, Benjamin R. Evans, Alex Dornburg, Alan R. Lemmon, Emily Moriarty Lemmon, Peter C. Wainwright, Thomas J. Near, Are 100 enough? Inferring acanthomorph teleost phylogeny using Anchored Hybrid Enrichment, BMC Evolutionary Biology, 2015, 15, 1

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  4. 4
    Christopher Blair, C. Ryan Campbell, Anne D. Yoder, Assessing the utility of whole genome amplified DNA for next-generation molecular ecology, Molecular Ecology Resources, 2015, 15, 4
  5. 5
    Edward D. Burress, Cichlid fishes as models of ecological diversification: patterns, mechanisms, and consequences, Hydrobiologia, 2015, 748, 1, 7

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  6. 6
    Claudius F. Kratochwil, Axel Meyer, Closing the genotype–phenotype gap: Emerging technologies for evolutionary genetics in ecological model vertebrate systems, BioEssays, 2015, 37, 2
  7. 7
    Hayley C. Lanier, Rob Massatti, Qixin He, Link E. Olson, L. Lacey Knowles, Colonization from divergent ancestors: glaciation signatures on contemporary patterns of genomic variation in Collared Pikas (Ochotona collaris), Molecular Ecology, 2015, 24, 14
  8. 8
    Eric N. Rittmeyer, Christopher C. Austin, Combined next-generation sequencing and morphology reveal fine-scale speciation in Crocodile Skinks (Squamata: Scincidae: Tribolonotus), Molecular Ecology, 2015, 24, 2
  9. 9
    Catherine E. Grueber, Comparative genomics for biodiversity conservation, Computational and Structural Biotechnology Journal, 2015, 13, 370

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  10. 10
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  11. 11
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  12. 12
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  13. 13
    Javier H. Santos-Santos, Leen Audenaert, Erik Verheyen, Dominique Adriaens, Divergent ontogenies of trophic morphology in two closely related haplochromine cichlids, Journal of Morphology, 2015, 276, 7
  14. 14
    Santiago Herrera, Hiromi Watanabe, Timothy M. Shank, Evolutionary and biogeographical patterns of barnacles from deep-sea hydrothermal vents, Molecular Ecology, 2015, 24, 3
  15. 15
    Anna Papadopoulou, L. Lacey Knowles, Genomic tests of the species-pump hypothesis: Recent island connectivity cycles drive population divergence but not speciation in Caribbean crickets across the Virgin Islands, Evolution, 2015, 69, 6
  16. 16
    Phillip A. Morin, Kim M. Parsons, Frederick I. Archer, María C. Ávila-Arcos, Lance G. Barrett-Lennard, Luciano Dalla Rosa, Sebastián Duchêne, John W. Durban, Graeme M. Ellis, Steven H. Ferguson, John K. Ford, Michael J. Ford, Cristina Garilao, M. Thomas P. Gilbert, Kristin Kaschner, Craig O. Matkin, Stephen D. Petersen, Kelly M. Robertson, Ingrid N. Visser, Paul R. Wade, Simon Y. W. Ho, Andrew D. Foote, Geographic and temporal dynamics of a global radiation and diversification in the killer whale, Molecular Ecology, 2015, 24, 15
  17. 17
    Antonia G. P. Ford, Kanchon K. Dasmahapatra, Lukas Rüber, Karim Gharbi, Timothee Cezard, Julia J. Day, High levels of interspecific gene flow in an endemic cichlid fish adaptive radiation from an extreme lake environment, Molecular Ecology, 2015, 24, 13
  18. 18
    Scott A. Taylor, Erica L. Larson, Richard G. Harrison, Hybrid zones: windows on climate change, Trends in Ecology & Evolution, 2015, 30, 7, 398

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  19. 19
    Naoual Azzouzi, Frederique Barloy-Hubler, Francis Galibert, Identification and characterization of cichlid TAAR genes and comparison with other teleost TAAR repertoires, BMC Genomics, 2015, 16, 1

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  20. 20
    John E. McCormack, James M. Maley, Interpreting negative results with taxonomic and conservation implications: Another look at the distinctness of coastal California Gnatcatchers, The Auk, 2015, 132, 2, 380

    CrossRef

  21. 21
    A. D. Leache, A. S. Chavez, L. N. Jones, J. A. Grummer, A. D. Gottscho, C. W. Linkem, Phylogenomics of Phrynosomatid Lizards: Conflicting Signals from Sequence Capture versus Restriction Site Associated DNA Sequencing, Genome Biology and Evolution, 2015, 7, 3, 706

    CrossRef

  22. 22
    A E Moura, J G Kenny, R R Chaudhuri, M A Hughes, R R Reisinger, P J N de Bruyn, M E Dahlheim, N Hall, A R Hoelzel, Phylogenomics of the killer whale indicates ecotype divergence in sympatry, Heredity, 2015, 114, 1, 48

    CrossRef

  23. 23
    B. M. McCluskey, J. H. Postlethwait, Phylogeny of Zebrafish, a "Model Species," within Danio, a "Model Genus", Molecular Biology and Evolution, 2015, 32, 3, 635

    CrossRef

  24. 24
    R. Alexander Pyron, Post-molecular systematics and the future of phylogenetics, Trends in Ecology & Evolution, 2015, 30, 7, 384

    CrossRef

  25. 25
    Ole Seehausen, Process and pattern in cichlid radiations – inferences for understanding unusually high rates of evolutionary diversification, New Phytologist, 2015, 207, 2
  26. 26
    Emily R. Ebel, Jeffrey M. DaCosta, Michael D. Sorenson, Ryan I. Hill, Adriana D. Briscoe, Keith R. Willmott, Sean P. Mullen, Rapid diversification associated with ecological specialization in Neotropical Adelpha butterflies, Molecular Ecology, 2015, 24, 10
  27. 27
    Matthew R. Jones, Jeffrey M. Good, Targeted capture in evolutionary and ecological genomics, Molecular Ecology, 2015, 24, 15
  28. 28
    Gary Longo, Giacomo Bernardi, The evolutionary history of the embiotocid surfperch radiation based on genome-wide RAD sequence data, Molecular Phylogenetics and Evolution, 2015, 88, 55

    CrossRef

  29. 29
    Colin E. Hughes, Guy W. Atchison, The ubiquity of alpine plant radiations: from the Andes to the Hengduan Mountains, New Phytologist, 2015, 207, 2
  30. 30
    T C Mathers, R L Hammond, R A Jenner, B Hänfling, J Atkins, A Gómez, Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis, Heredity, 2015, 115, 1, 37

    CrossRef

  31. 31
    E Pante, J Abdelkrim, A Viricel, D Gey, S C France, M C Boisselier, S Samadi, Use of RAD sequencing for delimiting species, Heredity, 2015, 114, 5, 450

    CrossRef

  32. 32
    Steven Dodsworth, Mark W. Chase, Tiina Särkinen, Sandra Knapp, Andrew R. Leitch, Using genomic repeats for phylogenomics: a case study in wild tomatoes (Solanum section Lycopersicon: Solanaceae), Biological Journal of the Linnean Society, 2015, 115, 4
  33. 33
    CHARLES S. HENRY, STEPHEN J. BROOKS, JAMES B. JOHNSON, ATSUSHI MOCHIZUKI, PETER DUELLI, A new cryptic species of the Chrysoperla carnea group (Neuroptera: Chrysopidae) from western Asia: parallel speciation without ecological adaptation, Systematic Entomology, 2014, 39, 2
  34. 34
    Katriina L. Ilves, Hernán López-Fernández, A targeted next-generation sequencing toolkit for exon-based cichlid phylogenomics, Molecular Ecology Resources, 2014, 14, 4
  35. 35
    Amélia Viricel, Eric Pante, Willy Dabin, Benoit Simon-Bouhet, Applicability of RAD-tag genotyping for interfamilial comparisons: empirical data from two cetaceans, Molecular Ecology Resources, 2014, 14, 3
  36. 36
    Tetsumi Takahashi, Nobuaki Nagata, Teiji Sota, Application of RAD-based phylogenetics to complex relationships among variously related taxa in a species flock, Molecular Phylogenetics and Evolution, 2014, 80, 137

    CrossRef

  37. 37
    J M Pujolar, M W Jacobsen, T D Als, J Frydenberg, E Magnussen, B Jónsson, X Jiang, L Cheng, D Bekkevold, G E Maes, L Bernatchez, M M Hansen, Assessing patterns of hybridization between North Atlantic eels using diagnostic single-nucleotide polymorphisms, Heredity, 2014, 112, 6, 627

    CrossRef

  38. 38
    Jeong-An Gim, Heui-Soo Kim, Development of an Economic-trait Genetic Marker by Applying Next-generation Sequencing Technologies in a Whole Genome, Journal of Life Science, 2014, 24, 11, 1258

    CrossRef

  39. 39
    R. K. Schott, S. P. Refvik, F. E. Hauser, H. Lopez-Fernandez, B. S. W. Chang, Divergent Positive Selection in Rhodopsin from Lake and Riverine Cichlid Fishes, Molecular Biology and Evolution, 2014, 31, 5, 1149

    CrossRef

  40. 40
    Jeffrey W. Streicher, Thomas J. Devitt, Caren S. Goldberg, John H. Malone, Heath Blackmon, Matthew K. Fujita, Diversification and asymmetrical gene flow across time and space: lineage sorting and hybridization in polytypic barking frogs, Molecular Ecology, 2014, 23, 13
  41. 41
    Frederik Leliaert, Heroen Verbruggen, Pieter Vanormelingen, Frederique Steen, Juan M. López-Bautista, Giuseppe C. Zuccarello, Olivier De Clerck, DNA-based species delimitation in algae, European Journal of Phycology, 2014, 49, 2, 179

    CrossRef

  42. 42
    Loren Rieseberg, Tim Vines, Jennifer Gow, Nolan Kane, Editorial 2014, Molecular Ecology, 2014, 23, 1
  43. You have free access to this content43
    John R. Pannell, Peter D. Fields, Evolution in subdivided plant populations: concepts, recent advances and future directions, New Phytologist, 2014, 201, 2
  44. 44
    Chris D. Jiggins, Evolutionary biology: Radiating genomes, Nature, 2014, 513, 7518, 318

    CrossRef

  45. 45
    Patrick Kück, Gary C Longo, FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies, Frontiers in Zoology, 2014, 11, 1

    CrossRef

  46. 46
    Dan G. Bock, Nolan C. Kane, Daniel P. Ebert, Loren H. Rieseberg, Genome skimming reveals the origin of the Jerusalem Artichoke tuber crop species: neither from Jerusalem nor an artichoke, New Phytologist, 2014, 201, 3
  47. 47
    J. M. Pujolar, M. W. Jacobsen, T. D. Als, J. Frydenberg, K. Munch, B. Jónsson, J. B. Jian, L. Cheng, G. E. Maes, L. Bernatchez, M. M. Hansen, Genome-wide single-generation signatures of local selection in the panmictic European eel, Molecular Ecology, 2014, 23, 10
  48. 48
    O. Puebla, E. Bermingham, W. O. McMillan, Genomic atolls of differentiation in coral reef fishes (Hypoplectrus spp., Serranidae), Molecular Ecology, 2014, 23, 21
  49. 49
    Joshua Puzey, Mario Vallejo-Marín, Genomics of invasion: diversity and selection in introduced populations of monkeyflowers (Mimulus guttatus), Molecular Ecology, 2014, 23, 18
  50. 50
    Marcial Escudero, Deren A.R. Eaton, Marlene Hahn, Andrew L. Hipp, Genotyping-by-sequencing as a tool to infer phylogeny and ancestral hybridization: A case study in Carex (Cyperaceae), Molecular Phylogenetics and Evolution, 2014, 79, 359

    CrossRef

  51. 51
    Kazumasa Shirai, Nobuyuki Inomata, Shinji Mizoiri, Mitsuto Aibara, Yohey Terai, Norihiro Okada, Hidenori Tachida, High prevalence of non-synonymous substitutions in mtDNA of cichlid fishes from Lake Victoria, Gene, 2014, 552, 2, 239

    CrossRef

  52. 52
    R. G. Harrison, E. L. Larson, Hybridization, Introgression, and the Nature of Species Boundaries, Journal of Heredity, 2014, 105, S1, 795

    CrossRef

  53. 53
    Mark P. Simmons, Limitations of locally sampled characters in phylogenetic analyses of sparse supermatrices, Molecular Phylogenetics and Evolution, 2014, 74, 1

    CrossRef

  54. 54
    Christopher H. Martin, Laura C. Feinstein, Novel trophic niches drive variable progress towards ecological speciation within an adaptive radiation of pupfishes, Molecular Ecology, 2014, 23, 7
  55. 55
    Thomas von Rintelen, Ristiyanti M. Marwoto, G. Douglas Haffner, Fabian Herder, Preface: Speciation research in ancient lakes – classic concepts and new approaches, Hydrobiologia, 2014, 739, 1, 1

    CrossRef

  56. 56
    D. A. R. Eaton, PyRAD: assembly of de novo RADseq loci for phylogenetic analyses, Bioinformatics, 2014, 30, 13, 1844

    CrossRef

  57. 57
    B. Nevado, S. E. Ramos-Onsins, M. Perez-Enciso, Resequencing studies of nonmodel organisms using closely related reference genomes: optimal experimental designs and bioinformatics approaches for population genomics, Molecular Ecology, 2014, 23, 7
  58. 58
    Tomotaka Matsumoto, Yohey Terai, Norihiro Okada, Hidenori Tachida, Sensory drive speciation and patterns of variation at selectively neutral genes, Evolutionary Ecology, 2014, 28, 4, 591

    CrossRef

  59. 59
    A. D. Leache, M. K. Fujita, V. N. Minin, R. R. Bouckaert, Species Delimitation using Genome-Wide SNP Data, Systematic Biology, 2014, 63, 4, 534

    CrossRef

  60. 60
    D. L. Edwards, L. L. Knowles, Species detection and individual assignment in species delimitation: can integrative data increase efficacy?, Proceedings of the Royal Society B: Biological Sciences, 2014, 281, 1777, 20132765

    CrossRef

  61. 61
    Frederico Henning, Axel Meyer, The Evolutionary Genomics of Cichlid Fishes: Explosive Speciation and Adaptation in the Postgenomic Era, Annual Review of Genomics and Human Genetics, 2014, 15, 1, 417

    CrossRef

  62. 62
    David Brawand, Catherine E. Wagner, Yang I. Li, Milan Malinsky, Irene Keller, Shaohua Fan, Oleg Simakov, Alvin Y. Ng, Zhi Wei Lim, Etienne Bezault, Jason Turner-Maier, Jeremy Johnson, Rosa Alcazar, Hyun Ji Noh, Pamela Russell, Bronwen Aken, Jessica Alföldi, Chris Amemiya, Naoual Azzouzi, Jean-François Baroiller, Frederique Barloy-Hubler, Aaron Berlin, Ryan Bloomquist, Karen L. Carleton, Matthew A. Conte, Helena D'Cotta, Orly Eshel, Leslie Gaffney, Francis Galibert, Hugo F. Gante, Sante Gnerre, Lucie Greuter, Richard Guyon, Natalie S. Haddad, Wilfried Haerty, Rayna M. Harris, Hans A. Hofmann, Thibaut Hourlier, Gideon Hulata, David B. Jaffe, Marcia Lara, Alison P. Lee, Iain MacCallum, Salome Mwaiko, Masato Nikaido, Hidenori Nishihara, Catherine Ozouf-Costaz, David J. Penman, Dariusz Przybylski, Michaelle Rakotomanga, Suzy C. P. Renn, Filipe J. Ribeiro, Micha Ron, Walter Salzburger, Luis Sanchez-Pulido, M. Emilia Santos, Steve Searle, Ted Sharpe, Ross Swofford, Frederick J. Tan, Louise Williams, Sarah Young, Shuangye Yin, Norihiro Okada, Thomas D. Kocher, Eric A. Miska, Eric S. Lander, Byrappa Venkatesh, Russell D. Fernald, Axel Meyer, Chris P. Ponting, J. Todd Streelman, Kerstin Lindblad-Toh, Ole Seehausen, Federica Di Palma, The genomic substrate for adaptive radiation in African cichlid fish, Nature, 2014, 513, 7518, 375

    CrossRef

  63. 63
    H. Huang, L. L. Knowles, Unforeseen Consequences of Excluding Missing Data from Next-Generation Sequences: Simulation Study of RAD Sequences, Systematic Biology, 2014,

    CrossRef

  64. 64
    Christina M. Bergey, Luca Pozzi, Todd R. Disotell, Andrew S. Burrell, A New Method for Genome-wide Marker Development and Genotyping Holds Great Promise for Molecular Primatology, International Journal of Primatology, 2013, 34, 2, 303

    CrossRef

  65. 65
    J. M. Pujolar, M. W. Jacobsen, J. Frydenberg, T. D. Als, P. F. Larsen, G. E. Maes, L. Zane, J. B. Jian, L. Cheng, M. M. Hansen, A resource of genome-wide single-nucleotide polymorphisms generated by RAD tag sequencing in the critically endangered European eel, Molecular Ecology Resources, 2013, 13, 4
  66. 66
    Luisa Orsini, Rose Andrew, Christophe Eizaguirre, Evolutionary Ecological Genomics, Molecular Ecology, 2013, 22, 3
  67. 67
    Katja T. C. A. Peijnenburg, Erica Goetze, High evolutionary potential of marine zooplankton, Ecology and Evolution, 2013, 3, 8
  68. 68
    Emily Moriarty Lemmon, Alan R. Lemmon, High-Throughput Genomic Data in Systematics and Phylogenetics, Annual Review of Ecology, Evolution, and Systematics, 2013, 44, 1, 99

    CrossRef

  69. 69
    William F. Perrin, Patricia E. Rosel, Frank Cipriano, How to contend with paraphyly in the taxonomy of the delphinine cetaceans?, Marine Mammal Science, 2013, 29, 4
  70. 70
    X. Q. Wang, L. Zhao, D. A. R. Eaton, D. Z. Li, Z. H. Guo, Identification of SNP markers for inferring phylogeny in temperate bamboos (Poaceae: Bambusoideae) using RAD sequencing, Molecular Ecology Resources, 2013, 13, 5
  71. 71
    Marie Cariou, Laurent Duret, Sylvain Charlat, Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization, Ecology and Evolution, 2013, 3, 4
  72. 72
    Yann X. C. Bourgeois, Emeline Lhuillier, Timothée Cézard, Joris A. M. Bertrand, Boris Delahaie, Josselin Cornuault, Thomas Duval, Olivier Bouchez, Borja Milá, Christophe Thébaud, Mass production of SNP markers in a nonmodel passerine bird through RAD sequencing and contig mapping to the zebra finch genome, Molecular Ecology Resources, 2013, 13, 5
  73. You have free access to this content73
    Julian Catchen, Paul A. Hohenlohe, Susan Bassham, Angel Amores, William A. Cresko, Stacks: an analysis tool set for population genomics, Molecular Ecology, 2013, 22, 11
  74. 74
    Anthony J. Barley, Jordan White, Arvin C. Diesmos, Rafe M. Brown, THE CHALLENGE OF SPECIES DELIMITATION AT THE EXTREMES: DIVERSIFICATION WITHOUT MORPHOLOGICAL CHANGE IN PHILIPPINE SUN SKINKS, Evolution, 2013, 67, 12
  75. 75
    Julia C. Jones, Shaohua Fan, Paolo Franchini, Manfred Schartl, Axel Meyer, The evolutionary history of Xiphophorus fish and their sexually selected sword: a genome-wide approach using restriction site-associated DNA sequencing, Molecular Ecology, 2013, 22, 11
  76. 76
    José G. Vallarino, Sonia Osorio, Technological Advances in Studies of Plant Adaptation,