Spatial and temporal patterns of genetic variation in the widespread antitropical deep-sea coral Paragorgia arborea
Article first published online: 23 OCT 2012
© 2012 Blackwell Publishing Ltd
Volume 21, Issue 24, pages 6053–6067, December 2012
How to Cite
Herrera, S., Shank, T. M. and Sánchez, J. A. (2012), Spatial and temporal patterns of genetic variation in the widespread antitropical deep-sea coral Paragorgia arborea. Molecular Ecology, 21: 6053–6067. doi: 10.1111/mec.12074
- Issue published online: 6 DEC 2012
- Article first published online: 23 OCT 2012
- Manuscript Accepted: 1 SEP 2012
- Manuscript Revised: 28 AUG 2012
- Manuscript Received: 1 JUN 2012
- the Global Census of Marine Life on Seamounts Project (CenSeam)
- the National Systematics Laboratory of NOAA's National Marine Fisheries Service
- Systematics Research Fund of the Systematics Association
- Linnean Society of London
- Sigma Xi Research Society
Appendix S1 Sequencing of old samples.
Table S1 Collection and sequence information for the specimens used in this study.
Table S2 Nucleotide substitution models for mitochondrial gene partitions, as selected by the AIC criterion in jmodeltest.
Table S3 Interspecific and intraspecific (i.e. coalescent depths) uncorrected pairwise distances (%) among haplotypes of species of Paragorgia and Sibogagorgia.
Fig. S1 Sampling location of specimens of Paragorgia arborea examined in this study.
Fig. S2 Depth distribution of samples shown in Fig. S1 (Supporting information).
Fig. S3 The revised geographic distribution of Paragorgia arborea.
Fig. S4 Depth distribution of records shown in Fig. S3 (Supporting information).
Fig. S5 Predicted ITS2 secondary structure of Paragorgia arborea.
Fig. S6 Individual mitochondrial gene tree hypotheses in Paragorgia.
Fig. S7 Fit of the GMYC single-threshold model to the mitochondrial time-calibrated gene tree generated with the Yule model tree prior.
Fig. S8 Fit of the GMYC single-threshold model to the mitochondrial time-calibrated gene tree generated with the coalescent model tree prior.
Fig. S9 Haplotype accumulation curves in Paragorgia arborea.
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