M. Delplancke and N. Alvarez contributed equally to this work and are considered as joint first authors.
Article first published online: 27 NOV 2012
© 2012 Blackwell Publishing Ltd
Volume 22, Issue 4, pages 1092–1104, February 2013
How to Cite
Delplancke, M., Alvarez, N., Benoit, L., Espíndola, A., I Joly, H., Neuenschwander, S. and Arrigo, N. (2013), Evolutionary history of almond tree domestication in the Mediterranean basin. Molecular Ecology, 22: 1092–1104. doi: 10.1111/mec.12129
- Issue published online: 29 JAN 2013
- Article first published online: 27 NOV 2012
- Manuscript Accepted: 10 OCT 2012
- Manuscript Revised: 5 OCT 2012
- Manuscript Received: 3 OCT 2011
- ‘Fruit Med Project’
- French Foundation Agropolis
- Swiss National Science Foundation. Grant Numbers: PBNEP3-132747, 3100A0-108194
Table S1 Sampling effort.
Table S2 Estimation of the presence of null alleles for each loci, using the method described by Chakraborty et al. (1992) and Brookfield (1996) as implemented in Microchecker (Van Oosterhout et al. 2004).
Table S3 Pairwise FST values among the K = 6 structure clusters.
Fig. S1 Screening for the optimal K number of structure clusters, using the ΔK criterion (Evanno et al. 2005).
Fig. S2 Phylogeographic patterns, as given by spatially-explicit Bayesian clustering implemented in tess.
Fig. S3 Genetic diversity of almond trees in the Mediterranean basin, after removing null alleles and individuals potentially admixed with Prunus orientalis (Delplancke et al. 2012).
Fig. S4 Phylogeographic patterns, after removing individuals potentially admixed with Prunus orientalis (Delplancke et al. 2012).
Fig. S5 Posterior distributions of the divergence time (T) in years B.P. and the number of migrants (2NeM) as obtained by IMa2 pairwise analyses, computed among structure clusters.
Fig. S6 Maximum likelihood estimates of population migration rate (i.e. 2Nem = Θ*M/2) among structure clusters as revealed by IMa2 pairwise analyses.
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