Article first published online: 24 DEC 2012
© 2012 Blackwell Publishing Ltd
Volume 22, Issue 4, pages 1019–1034, February 2013
How to Cite
Pagès, M., Bazin, E., Galan, M., Chaval, Y., Claude, J., herbreteau, V., Michaux, J., Piry, S., Morand, S. and Cosson, J.-F. (2013), Cytonuclear discordance among Southeast Asian black rats (Rattus rattus complex). Molecular Ecology, 22: 1019–1034. doi: 10.1111/mec.12149
- Issue published online: 29 JAN 2013
- Article first published online: 24 DEC 2012
- Manuscript Accepted: 17 OCT 2012
- Manuscript Revised: 15 OCT 2012
- Manuscript Received: 13 JUN 2012
- French National Agency for Research project CERoPath. Grant Numbers: 00121 0505, 07 BDIV 012
- FRS-FNRS fellowship
- Belgian Fund for Scientific Research
Table S1 Correspondence between our mt DNA terminology and those used in recent studies on the Rattus rattus complex.
Table S2 Sample information.
Table S3 Sample sizes according to mt lineages and sexes for the morphometric analysis.
Table S4 Estimates of net evolutionary divergence (K2P-) between mt lineages expressed in percentage for Cytb, COI and IRBP datasets respectively.
Table S5 Observed Heterozygosity (HO), Expected Heterozygosity (HS), and Inbreeding Coefficient (FIS).
Fig. S1 Clinal shape variations among tanezumi and R3 mt lineages.
Fig. S2 Phylogenetic tree depicting the relationships of the mt lineages based on the analysis of the Cytb and COI haplotypes (combined).
Fig. S3 Phylogenetic tree depicting the relationships of the mt lineages based on the analysis of the IRBP genes (nuclear exon).
Fig. S4 Genetic clustering using structure software.
Fig. S5 Pairwise mismatch distributions for the different Rattus mt lineages based on mt data.
Fig. S6 Regressions of â against ln (geographical distances) (km) within tanezumi and R3 mt lineages respectively, and between individuals of both mt lineages.
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