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Special issue: Genotyping By Sequencing

Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards

  1. Katie E. Hyma1,2,*,
  2. Justin C. Fay1,2

Article first published online: 3 JAN 2013

DOI: 10.1111/mec.12155

Additional Information

How to Cite

Hyma, K. E. and Fay, J. C. (2013), Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards. Molecular Ecology. doi: 10.1111/mec.12155

Author Information

  1. 1

    Evolution, Ecology and Population Biology Program, Washington University, St. Louis, MO, USA

  2. 2

    Department of Genetics, Center for Genome Sciences and Systems Biology, Washington University, St. Louis, MO, USA

*Correspondence: Katie E. Hyma, Computation Biology Service Unit, Life Sciences Core Laboratories Center, 621 Rhodes Hall, Cornell University, Ithaca, NY 14853, USA. Fax: 607-254-8888; E-mail: kehyma@wustl.edu

Publication History

  1. Article first published online: 3 JAN 2013
  2. Manuscript Accepted: 19 OCT 2012
  3. Manuscript Revised: 15 OCT 2012
  4. Manuscript Received: 23 AUG 2012

Funded by

  • NIH. Grant Number: GM080669

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Table S1 Multiplex PCR assay for Saccharomyces sensu stricto.

Table S2 Size of expected fragments for Saccharomyces sensu stricto ribotyping.

Table S3 RAD genotyped Saccharomyces cerevisiae strains collected in this study.

Table S4 RAD genotyped Saccharomyces paradoxus strains collected in this study.

Table S5 Sequenced Saccharomyces cerevisiae genomes used in this study.

Table S6 Published Saccharomyces paradoxus genomes (SGRP) used in this study.

Table S7 False discovery rate estimates for solexa RAD genotyping.

Fig. S1 Minor allele frequencies differ between vineyard and oak clades of Saccharomyces cerevisiae.

Fig. S2 Population structure in Saccharomyces paradoxus.

Fig. S3 Minor allele frequencies in Saccharomyces paradoxus.

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