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Table S1 Variable positions (numbered) in the 795 base pairs of the mitochondrial ATP segment of Kuhlia rupestris.

Table S2 Variable positions (numbered) in the 838 base pairs of the mitochondrial ND4 segment of Kuhlia rupestris.

Table S3 Genetic variability at 15 microsatellite loci of Kuhlia rupestris collected in nine locations from the Indo-Pacific region.

Table S4 Log probability and ΔK (Evanno et al. 2005) for each number of clusters (K) calculated with the Bayesian based-model method, as implemented in the software Structure (Pritchard et al. 2000).

Fig. S1 Phylogenetic tree inferred from 21 ND4 sequences haplotypes of K. rupestris.

Fig. S2 Network of K. rupestris ND4 sequences from ten locations in the Pacific and Indian Oceans.

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