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Original Article
Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping
Article first published online: 4 MAR 2013
DOI: 10.1111/mec.12215
© 2013 Blackwell Publishing Ltd
Additional Information
How to Cite
Deagle, B. E., Jones, F. C., Absher, D. M., Kingsley, D. M. and Reimchen, T. E. (2013), Phylogeography and adaptation genetics of stickleback from the Haida Gwaii archipelago revealed using genome-wide single nucleotide polymorphism genotyping. Molecular Ecology, 22: 1917–1932. doi: 10.1111/mec.12215
Publication History
- Issue published online: 18 MAR 2013
- Article first published online: 4 MAR 2013
- Manuscript Accepted: 13 DEC 2012
- Manuscript Revised: 12 DEC 2012
- Manuscript Received: 12 OCT 2012
Funded by
- NSERC Discovery
- NRC. Grant Numbers: 2354, P50 HG002568
- US National Institutes of Health
- NSERC Postdoctoral Fellowship
- Abstract
- Article
- References
- Supporting Information
- Cited By
| Filename | Format | Size | Description |
|---|---|---|---|
| mec12215-sup-0001-FigS1.pdf | application/PDF | 551K | Fig. S1 Detailed maps showing populations from Sangan watershed, Masset Inlet and lakes with unarmoured fish in adjacent watersheds. The position of these populations in the SNP tree is also shown. |
| mec12215-sup-0002-FigS2.pdf | application/PDF | 187K | Fig. S2 Neighbour-joining distance tree constructed as in Fig 2 but with poorly supported (50% bootstrap cut-off value) branches condensed to highlight the unresolved basal node and well-supported clusters at higher levels. |
| mec12215-sup-0003-FigS3.pdf | application/PDF | 264K | Fig. S3 Details of PCA of evenly spaced SNPs. Includes PCA plot labelled with population names and weighting of SNPs. |
| mec12215-sup-0004-FigS4.pdf | application/PDF | 50K | Fig. S4 Tree-based analysis of stickleback from two populations that each contain both divergent mtDNA lineages (ENA and Japan Sea). |
| mec12215-sup-0005-FigS5.pdf | application/PDF | 796K | Fig. S5 Analysis of SNPs that were the most divergent between freshwater and marine/estuarine collected stickleback. |
| mec12215-sup-0006-TableS1.pdf | application/PDF | 239K | Table S1 List of collection locations and sample sizes. |
| mec12215-sup-0007-TableS2.pdf | application/PDF | 612K | Table S2 NCBI dbSNP reference numbers and genomic locations for genotyped SNPs. |
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