Selection, genome-wide fitness effects and evolutionary rates in the model legume Medicago truncatula
Article first published online: 15 JUN 2013
© 2013 John Wiley & Sons Ltd
Volume 22, Issue 13, pages 3525–3538, July 2013
How to Cite
Paape, T., Bataillon, T., Zhou, P., J. Y. Kono, T., Briskine, R., Young, N. D. and Tiffin, P. (2013), Selection, genome-wide fitness effects and evolutionary rates in the model legume Medicago truncatula. Molecular Ecology, 22: 3525–3538. doi: 10.1111/mec.12329
- Issue published online: 26 JUN 2013
- Article first published online: 15 JUN 2013
- Manuscript Accepted: 12 MAR 2013
- Manuscript Revised: 22 FEB 2013
- Manuscript Received: 21 NOV 2012
- National Science Foundation. Grant Number: 0820005
Fig. S1 Results of structure analyses for K = 3, the best fit to the data according to the Evanno method.
Table S1 Accessions and mean fold sequence coverage across the genome.
Table S2 Gene list of candidates with dN:dS > 1 and DtH in 5% tails; excel datasheet.
Table S3 MK test results for 206 genes with P < 0.05 and DoS > 0; excel datasheet.
Table S4 Distribution of fitness effects with singletons removed.
Table S5 Distribution of fitness effects for whole genome sample of 56 accessions with mixed coverage (Table S1) vs. 26 accessions with >12× coverage.
Table S6 Correlations of genomic features with evolutionary rates at non-synonymous (dN), synonymous (dS), dN:dS for 4931 genes with no evidence of expression.
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