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  • Allers, T., Ngo, H.P., Mevarech, M., and Lloyd, R.G. (2004) Development of additional selectable markers for the halophilic archaeon Haloferax volcanii based on the leuB and trpA genes. Appl Environ Microbiol 70: 943953.
  • Allers, T., Barak, S., Liddell, S., Wardell, K., and Mevarech, M. (2010) Improved strains and plasmid vectors for conditional overexpression of His-tagged proteins in Haloferax volcanii. Appl Environ Microbiol 76: 17591769.
  • Blattner, F.R., Williams, B.G., Blechl, A.E., Denniston-Thompson, K., Faber, H.E., Furlong, L., et al. (1977) Charon phages: safer derivatives of bacteriophage lambda for DNA cloning. Science 196, 161169.
  • Brasch, J., Harrison, O.J., Honig, B., and Shapiro, L. (2012) Thinking outside the cell: how cadherins drive adhesion. Trends Cell Biol 22: 299310.
  • Chagnot, C., Listrat, A., Astruc, T., and Desvaux, M. (2012) Bacterial adhesion to animal tissues: protein determinants for recognition of extracellular matrix components. Cell Microbiol 14: 16871696.
  • Comfort, D., and Clubb, R.T. (2004) A comparative genome analysis identifies distinct sorting pathways in gram-positive bacteria. Infect Immun 72: 27102722.
  • Dyall-Smith, M. (2004) The halohandbook – protocols for haloarchaeal genetics. [WWW document]. URL http://www.haloarchaea.com.
  • Elias, J.E., and Gygi, S.P. (2007) Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat Methods 4: 207214.
  • Eng, J.K., McCormack, A.L., and Yates, J.R. (1994) Approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J Am Soc Mass Spectrom 5: 976989.
  • Fedorov, O.V., Pyatibratov, M.G., Kostyukova, A.S., Osina, N.K., and Tarasov, V.Y. (1994) Protofilament as astructural element of flagella of haloalkalophilic archaebacteria. Can J Microbiol 40: 4553.
  • Ghosh, A., and Albers, S.V. (2011) Assembly and function of the archaeal flagellum. Biochem Soc Trans 39: 6469.
  • Haft, D.H., Paulsen, I.T., Ward, N., and Selengut, J.D. (2006) Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic. BMC Biol 4: 29.
  • Haft, D.H., Payne, S.H., and Selengut, J.D. (2012) Archaeosortases and exosortases are widely distributed systems linking membrane transit with posttranslational modification. J Bacteriol 194: 3648.
  • Haft, D.H., Selengut, J.D., Richter, R.A., Harkins, D., Basu, M.K., and Beck, E. (2013) TIGRFAMs and Genome Properties in 2013. Nucleic Acids Res 41: D387D395.
  • Harrison, O.J., Bahna, F., Katsamba, P.S., Jin, X., Brasch, J., Vendome, J., et al. (2010) Two-step adhesive binding by classical cadherins. Nat Struct Mol Biol 17: 348357.
  • Hartman, A.L., Norais, C., Badger, J.H., Delmas, S., Haldenby, S., Madupu, R., et al. (2010) The complete genome sequence of Haloferax volcanii DS2, a model archaeon. PLoS ONE 5: e9605.
  • Jarrell, K.F., and McBride, M.J. (2008) The surprisingly diverse ways that prokaryotes move. Nat Rev Microbiol 6: 466476.
  • Kandiba, L., Guan, Z., and Eichler, J. (2012) Lipid modification gives rise to two distinct Haloferax volcanii S-layer glycoprotein populations. Biochim Biophys Acta 1828: 938943.
  • Kikuchi, A., Sagami, H., and Ogura, K. (1999) Evidence for covalent attachment of diphytanylglyceryl phosphate to the cell-surface glycoprotein of Halobacterium halobium. J Biol Chem 274: 1801118016.
  • Kim, S., Gupta, N., and Pevzner, P.A. (2008) Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases. J Proteome Res 7: 33543363.
  • Kline, K.A., Kau, A.L., Chen, S.L., Lim, A., Pinkner, J.S., Rosch, J., et al. (2009) Mechanism for sortase localization and the role of sortase localization in efficient pilus assembly in Enterococcus faecalis. J Bacteriol 191: 32373247.
  • Konrad, Z., and Eichler, J. (2002) Lipid modification of proteins in Archaea: attachment of a mevalonic acid-based lipid moiety to the surface-layer glycoprotein of Haloferax volcanii follows protein translocation. Biochem J 366: 959964.
  • Livesay, E.A., Tang, K., Taylor, B.K., Buschbach, M.A., Hopkins, D.F., LaMarche, B.L., et al. (2008) Fully automated four-column capillary LC-MS system for maximizing throughput in proteomic analyses. Anal Chem 80: 294302.
  • Mazmanian, S.K., Liu, G., Ton-That, H., and Schneewind, O. (1999) Staphylococcus aureus sortase, an enzyme that anchors surface proteins to the cell wall. Science 285: 760763.
  • Mevarech, M., and Werczberger, R. (1985) Genetic transfer in Halobacterium volcanii. J Bacteriol 162: 461462.
  • Pasa-Tolic, L., Masselon, C., Barry, R.C., Shen, Y., and Smith, R.D. (2004) Proteomic analyses using an accurate mass and time tag strategy. Biotechniques 37: 621624, 626–633, 636 passim.
  • Perry, A.M., Ton-That, H., Mazmanian, S.K., and Schneewind, O. (2002) Anchoring of surface proteins to the cell wall of Staphylococcus aureus. III. Lipid II is an in vivo peptidoglycan substrate for sortase-catalyzed surface protein anchoring. J Biol Chem 277: 1624116248.
  • Rosenshine, I., Tchelet, R., and Mevarech, M. (1989) The mechanism of DNA transfer in the mating system of an archaebacterium. Science 245: 13871389.
  • Schneewind, O., and Missiakas, D.M. (2012) Protein secretion and surface display in Gram-positive bacteria. Philos Trans R Soc Lond B Biol Sci 367: 11231139.
  • Shen, Y., Tolić, N., Hixson, K.K., Purvine, S.O., Anderson, G.A., and Smith, R.D. (2008) De novo sequencing of unique sequence tags for discovery of post-translational modifications of proteins. Anal Chem 80: 77427754.
  • Shevchenko, A., Tomas, H., Havlis, J., Olsen, J.V., and Mann, M. (2006) In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nat Protoc 1: 28562860.
  • Smith, R.D., Anderson, G.A., Lipton, M.S., Paša-Tolic, L., Shen, Y., Conrads, T.P., et al. (2002) An Accurate mass tag strategy for quantitative and high throughput proteome measurements. Proteomics 2: 513523.
  • Spirig, T., Weiner, E.M., and Clubb, R.T. (2011) Sortase enzymes in Gram-positive bacteria. Mol Microbiol 82: 10441059.
  • Sumper, M. (1987) Halobacterial glycoprotein biosynthesis. Biochim Biophys Acta 906: 6979.
  • Sumper, M., Berg, E., Mengele, R., and Strobel, I. (1990) Primary structure and glycosylation of the S-layer protein of Haloferax volcanii. J Bacteriol 172: 71117118.
  • Szabo, Z., and Pohlschroder, M. (2012) Diversity and subcellular distribution of archaeal secreted proteins. Front Microbiol 3: 207.
  • Ton-That, H., and Schneewind, O. (1999) Anchor structure of staphylococcal surface proteins. IV. Inhibitors of the cell wall sorting reaction. J Biol Chem 274: 2431624320.
  • Ton-That, H., Liu, G., Mazmanian, S.K., Faull, K.F., and Schneewind, O. (1999) Purification and characterization of sortase, the transpeptidase that cleaves surface proteins of Staphylococcus aureus at the LPXTG motif. Proc Natl Acad Sci USA 96: 1242412429.
  • Tripepi, M., Imam, S., and Pohlschroder, M. (2010) Haloferax volcanii flagella are required for motility but are not involved in PibD-dependent surface adhesion. J Bacteriol 192: 30933102.
  • Yoshida, T., Ayabe, Y., Yasunaga, M., Usami, Y., Habe, H., Nojiri, H., and Omori, T. (2003) Genes involved in the synthesis of the exopolysaccharide methanolan by the obligate methylotroph Methylobacillus sp strain 12S. Microbiology 149: 431444.