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mms12119-sup-0001-FigureS1.pdfapplication/PDF14KAppendix S1. Examples of Bugs code, data list, and initial value list for estimating the proportion of unidentifiable animals and group sizes in a photographic identification study. Four models (Table 2) are listed below. Only one set of initial values are presented.
mms12119-sup-0002-FigureS2.pdfapplication/PDF14KFigure S1. Posterior median and 95% intervals of the hyper-parameters that define the population-level proportion of identifiable individuals computed for four different levels of sample sizes (5, 10, 25, and 50 groups). These results were for the model with no covariate for the efficiency parameter (Model 2). Values on the horizontal axis indicate the group size ranges. Solid horizontal lines indicate the true parameter values for when the true mean population proportion was 0.3 (posterior medians in circles), whereas dotted horizontal lines indicate when the true mean proportion was 0.6 (posterior medians in triangles).
mms12119-sup-0003-FigureS3.pdfapplication/PDF14KFigure S2. Summary statistics (medians and 95% PIs) of posterior distributions for the slope of the logistic model of the efficiency parameter (see Methods) for combinations of group sizes (5–25, 26–50, and 51–100), sample sizes (5, 10, 25, and 50 groups), and sample durations (5 and 20 min). The true value is indicated with a solid horizontal line. Circles indicate when the true mean proportion was 0.3, whereas triangles indicate when the true mean proportion was 0.6.
mms12119-sup-0004-FigureS4.pdfapplication/PDF15KFigure S3. Summary statistics (medians and 95% PIs) of posterior distributions for the intercept of the logistic model of the efficiency parameter (see Methods) for combinations of group sizes (5–25, 26–50, and 51–100), sample sizes (5, 10, 25, and 50 groups), and sample durations (5 and 20 min). The true value is indicated with a solid horizontal line. Circles indicate when the true mean proportion was 0.3, whereas triangles indicate when the true mean proportion was 0.6.
mms12119-sup-0005-AppendixS1.docWord document38KFigure S4. Summary statistics (medians and 95% PIs) of posterior distributions for the error term of the logistic model of the efficiency parameter (see the method section) for combinations of group sizes (5–25, 26–50, and 51–100), sample sizes (5, 10, 25, and 50 groups), and sample durations (5 and 20 min). The true value is indicated with a solid horizontal line. Circles indicate when the true mean proportion was 0.3, whereas triangles indicate when the true mean proportion was 0.6.

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