Multilocus estimation of divergence times and ancestral effective population sizes of Oryza species and implications for the rapid diversification of the genus
Article first published online: 11 APR 2013
© 2013 The Authors. New Phytologist © 2013 New Phytologist Trust
Volume 198, Issue 4, pages 1155–1164, June 2013
How to Cite
Zou, X.-H., Yang, Z., Doyle, J. J. and Ge, S. (2013), Multilocus estimation of divergence times and ancestral effective population sizes of Oryza species and implications for the rapid diversification of the genus. New Phytologist, 198: 1155–1164. doi: 10.1111/nph.12230
- Issue published online: 7 MAY 2013
- Article first published online: 11 APR 2013
- Manuscript Accepted: 8 FEB 2013
- Manuscript Received: 2 JAN 2013
- National Natural Science Foundation of China. Grant Number: 30990240
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Fig. S1 Effect of the priors for fossil calibration and rate heterogeneity across branches on posterior estimates of divergence time.
Fig. S2 The posterior means of divergence time were plotted against the width of corresponding 95% Confidence Intervals (CIs) for each node.
Fig. S3 Relative rate or among-locus rate variation of 66 loci.
Table S1 Information on 106 loci used in the present study
Table S2 Posterior distributions of θ values for ancestral populations based on 66 loci using different prior means of θ of 0.005, 0.01, 0.02, 0.03 and 0.05
Table S3 Posterior distributions of θ values for ancestral populations based on the reduced dataset without recombination signal using different priors mean of θ from 0.005, 0.01, 0.02, 0.03 to 0.05