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Fig. S1 Distribution of Tulasnella samples obtained from orchids in Australia.

Fig. S2 Midpoint rooted Maximum Likelihood tree for Tulasnella obtained for the mtLSU.

Fig. S3 Midpoint rooted Maximum Likelihood tree for Tulasnella obtained for locus C4102.

Fig. S4 Midpoint rooted Maximum Likelihood tree for Tulasnella obtained for locus C12424.

Fig. S5 Midpoint rooted Maximum Likelihood tree for Tulasnella obtained for locus C14436.

Fig. S6 Midpoint rooted Maximum Likelihood tree for Tulasnella obtained for locus C3304.

Fig. S7 Midpoint rooted Maximum Likelihood tree for Tulasnella obtained for locus C4722.

Fig. S8 Midpoint rooted Maximum Likelihood tree for Tulasnella obtained for locus C10499.

Fig. S9 The coalescent-based species trees and Bayesian species delimitation results for Tulasnella Bayesian species trees inferred with *BEAST.

Fig. S10 Bayesian model-based clustering likelihoods and ΔK model selection for 28 fungal isolates from Chiloglottis.

Fig. S11 Bayesian model-based clustering likelihoods and ΔK model selection for 26 fungal isolates from Drakaea + Paracaleana.

Fig. S12 Bayesian model-based clustering likelihoods and ΔK model selection for nine fungal isolates from Arthrochilus.

Table S1 Fungal symbionts from Chiloglottis, Drakaea, Paracaleana and Arthrochilus used in phylogenetic analyses

Table S2 Characteristics of phylogenetic markers for Tulasnella fungi from Chiloglottis, Drakaea, Paracaleana and Arthrochilus orchids

Table S3 Bayesian posterior probabilities for the speciation models sampled by BPP under different combinations of θ and τ0 priors

Table S4 Results of germination trials with Tulasnella isolates and orchid seed combinations used

Notes S1 Additional information on methods and results.

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