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nph12706-sup-0001-FigS1-S5.pdfPDF document979K

Fig. S1 Frequency of recombination breakpoint locations distributed along the length of each An chromosome in a population derived from a B. juncea × B. napus (AnAjBjCn) hybrid.

Fig. S2 Frequency of recombination breakpoint locations distributed along the length of each Aj chromosome in a population derived from a B. juncea × B. napus (AnAjBjCn) hybrid.

Fig. S3 Frequency of recombination breakpoint locations distributed along the length of each Cn chromosome in a population derived from a B. juncea × B. napus (AnAjBjCn) hybrid.

Fig. S4 Frequency of recombination breakpoint locations distributed along the length of each Aj chromosome in a population derived from a B. juncea × B. carinata (BjBcAjCc) hybrid.

Fig. S5 Frequency of recombination breakpoint locations distributed along the length of each Cc chromosome in a population derived from a B. juncea × B. carinata (BjBcAjCc) hybrid.

nph12706-sup-0002-FigS6-S8.pdfPDF document232K

Fig. S6 Allelic inheritance of SNP markers in the B. juncea and B. napus A genomes in testcross progeny derived from a B. juncea × B. napus (AjAnBjCn) hybrid.

Fig. S7 Allelic inheritance of SNP markers in the B. napus C genome in testcross progeny derived from a B. juncea × B. napus (AjAnBjCn) hybrid.

Fig. S8 Allelic inheritance of SNP markers in testcross progeny derived from a B. juncea × B. carinata (BcBjAjCc) hybrid.

nph12706-sup-0003-TableS1.xlsxapplication/msexcel479KTable S1 SNP markers used to characterize the (B. juncea × B. napus× B. carinata and the (B. juncea × B. carinata) × B. napus experimental populations, with information from the Brassica SNP consortium and the two sequenced diploid Brassica genomes.
nph12706-sup-0004-TableS2.xlsxapplication/msexcel8701KTable S2 Segregation of all alleles within B. juncea × B. carinata (BjBcAjCc) hybrids, showing statistical significance of segregation (red) and cosegregation (blue) interactions (Fisher's exact test for count data)
nph12706-sup-0005-TableS3.xlsxapplication/msexcel946KTable S3 Segregation of all alleles within B. juncea × B. napus (AjAnBjCn) hybrids, showing statistical significance of segregation (red) and cosegregation (blue) interactions (Fisher's exact test for count data)
nph12706-sup-0006-TableS4A.xlsxapplication/msexcel1110KTable S4 Linkage disequilibrium between A- and C-genome markers in a B. juncea × B. carinata (BjBcAjCc) hybrid testcross population: (A) r correlations, (B) P-values and (C) D
nph12706-sup-0007-TableS4B.xlsxapplication/msexcel1060K 
nph12706-sup-0008-TableS4c.xlsxapplication/msexcel1061K 
nph12706-sup-0009-TableS5A.xlsxapplication/msexcel11317KTable S5 Linkage disequilibrium between A- and C-genome markers in a B. juncea × B. napus (AjAnBjCn) hybrid testcross population: (A) r correlations, (B) P-values and (C) D
nph12706-sup-0010-TableS5B.xlsxapplication/msexcel9580K 
nph12706-sup-0011-TableS5C.xlsxapplication/msexcel9499K 
nph12706-sup-0012-NotesS1.txtplain text document10KNotes S1 R scripts used to analyze segregation of alleles from B. juncea × B. carinata (BjBcAjCc) and B. juncea × B. napus (AjAnBjCn) hybrids.