pbi12081-sup-0001-AdditionalFileS1.xlsxapplication/msexcel45KData S1 Excel file of the mapping coverage for each scaffold of the peach genome for each sample. Blank entries are the result of no mapping.
pbi12081-sup-0002-AdditionalFileS2.tsvtext/tsv23862KData S2 GFF annotation file (International_Peach_Genome_Initiative, 2013) of the peach genome used in these analyses as downloaded from GDR (Jung et al., 2008).
pbi12081-sup-0003-AdditionalFileS3.gzapplication/x-compressed10400KData S3 Fasta file of peach cDNA sequences.
pbi12081-sup-0004-AdditionalFileS4.pptxapplication/pptx223KData S4 PPT file with a compressed bar graph depicting polymorphism rate in each 50kb window for each sample.
pbi12081-sup-0005-AdditionalFileS5.xlsxapplication/msexcel29KData S5 Excel file of the 50 kb regions with significantly higher or lower polymorphism depth.
pbi12081-sup-0006-AdditionalFileS6.gzapplication/x-compressed1164KData S6 GO-term composition of nonsense SNP-containing datasets separated by molecular function, biological process, and cellular component. Blast2GO was used to assign function to sequences predicted to have nonsense mutations. GO-terms were separated by percent composition for each dataset including the entire peach dataset. Comparison to the entire peach identifies GO-terms which may have higher or lower frequencies of developing nonsense-SNPs.
pbi12081-sup-0007-AdditionalFileS7.xlsxapplication/msexcel83KData S7 Chi-square test of observed Gene Ontology distribution amongst datasets.
pbi12081-sup-0008-AdditionalFileS8.xlsxapplication/msexcel19KData S8 KEGG pathways with members predicted to have non-sense SNPs.
pbi12081-sup-0009-AdditionalFileS9.xlsxapplication/msexcel16KData S9 KEGG pathways with members in ‘Response to Stress' gene ontology.
pbi12081-sup-0010-AdditionalFileS10.pngPNG image63KData S10 Venn diagram of Peach genes containing non-sense mutations detected within the four investigated genotypes of almond. Sequences corresponding to mutations in the peach predicted genes were recorded for each almond genotype (Oliveros 2007).
pbi12081-sup-0011-AdditionalFileS11.docxWord document18KData S11 Blast2GO methods used in this study.

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