pbi12082-sup-0001-FigS1.jpgimage/jpg64KFigure S1 Comparison of de novo assembly using Velvet and various assembly programs. (a) Representation of assembly statistics obtained using Velvet at different k-mers (x-axis). Bars represent no. of contigs >100 bp (left axis), N50 value and average contig size are represented by the right axis. (b) Comparison of various assemblers based on number of contigs (bars; left axis), N50 length (right axis) and average contig size (right axis).
pbi12082-sup-0002-FigS2.jpgimage/jpg28KFigure S2 Analysis of GC content. The average GC content of each transcript for different plant species was calculated, and percentage of transcripts with GC content of these plants are represented.
pbi12082-sup-0003-TableS1.xlsapplication/msexcel21KTable S1 Statistics of de novo assembly of lentil transcriptome using Velvet at various k-mer lengths.
pbi12082-sup-0004-TableS2.xlsapplication/msexcel22KTable S2 Transcription factor families showing events of contraction and expansion in lentil as compared with other legumes.
pbi12082-sup-0005-TableS3.xlsapplication/msexcel6726KTable S3 Expression of lentil transcripts in different tissues (seedling, leaf and root) in terms of reads per million (rpm) and reads per kilobase per million (rpkm).
pbi12082-sup-0006-TableS4.xlsapplication/msexcel1627KTable S4 List of SSRs identified in lentil transcriptome with their sequences, repeat motifs, annealing temperature (Tm), GC content (%) and expected size of amplified product.
pbi12082-sup-0007-TableS5.xlsapplication/msexcel21KTable S5 List of genotypes used for the analysis of genetic diversity.
pbi12082-sup-0008-TableS6.xlsapplication/msexcel36KTable S6 List of SSR markers used in the analysis of genetic diversity with their sequences, amplification product size (bp), repeat motifs, annealing temperature (Tm), number of alleles, observed heterozygosity (Ho), expected heterozygosity (He), polymorphic information content (PIC) and Shanon's information index (I).
pbi12082-sup-0009-TableS7.xlsapplication/msexcel1404KTable S7 Functions assigned to SSR containing lentil transcripts.

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