SEARCH

SEARCH BY CITATION

References

  • Ainsworth E.A. & Long S.P. (2005) What have we learned from 15 years of free-air CO2 enrichment (FACE)? A meta-analytic review of the responses of photosynthesis, canopy. New Phytologist 165, 351371.
  • Atkin O.K., Evans J.R., Ball M.C., Lambers H. & Pons T.L. (2000) Leaf Respiration of Snow Gum in the Light and Dark. Interactions between Temperature and Irradiance. Plant Physiology 122, 915924.
  • Badger M.R. & Andrews T.J. (1987) Co-evolution of Rubisco and CO2 concentrating mechanisms. In Progress in Photosynthesis Research, Volume III (ed. J. Biggins ), pp. 601609. Martinus Nijhoff Publishers, Dordrecht.
  • Badger M.R. & Collatz G.J. (1977) Studies on the kinetic mechanism of RuBP carboxylase and oxygenase reactions, with particular reference to the effect of temperature on kinetic papameters. Carnegie Institute of Washington Yearbook 76, 355361.
  • Bernacchi C.J., Portis A.R., Nakano H., von Caemmerer S. & Long S.P. (2002) Temperature response of mesophyll conductance. Implications for the determination of Rubisco enzyme kinetics and for limitations to photosynthesis in vivo. Plant Physiology 130, 19921998.
  • Bernacchi C.J., Rosenthal D.M., Pimentel C., Long S.P. & Farquhar G.D. (2009) Modelling the temperature dependence of C3 photosynthesis. In Photosynthesis in Silico. Understanding Complexity from Molecules to Ecosystems (eds A. Laisk , L. Nedbal & Govindjee ), pp. 231246. Springer, Dordrecht, Netherlands.
  • Berry J.A. & Farquhar G.D. (1978) The CO2 concentrating function of C4 photosynthesis: a biochemical model. In The Proceedings of the Fourth International Congress on Photosynthesis (eds D. Hall , J. Coombs & T. Goodwin ), pp. 119131. Biochemical Society of London, London.
  • Björkman O. (1968) Carboxydismutase activity in shade and sun adapted species of higher plants. Physiol.Plantarum 21, 110.
  • Bowes G., Ogren W.L. & Hageman R.H. (1971) Phosphoglycolate production catalyzed by ribulose diphosphate carboxylase. Biochemical and Biophysical Research Communications 45, 716722.
  • Busch F.A., Sage T.L., Cousins A.B. & Sage R.B. (2013) C3 plants enhance rates of photosynthesis by reassimilating photorespired CO2. Plant, Cell & Environment 36, 200212.
  • von Caemmerer S. (1989) A model of photosynthetic CO2 assimilation and carbon isotope discrimination in leaves of certain C3-C4 intermediate species. Planta 178, 463474.
  • von Caemmerer S. (1992) Carbon isotope discrimination in C3-C4 intermediates. Plant, Cell & Environment 15, 10631072.
  • von Caemmerer S. (2000) Biochemical Models of Leaf Photosynthesis. Vol. 2. CSIRO Publishing, Collingwood, Australia.
  • von Caemmerer S. (2003) C4 photosynthesis in a single C3 cell is theoretically inefficient but may ameliorate internal CO2 diffusion limitations of C3 leaves. Plant, Cell & Environment 26, 11911197.
  • von Caemmerer S. & Evans J.R. (1991) Determination of the average partial pressure of CO2 in chloroplast from leaves of several C3 plants. Australian Journal Plant Physiology 18, 287305.
  • von Caemmerer S. & Furbank R.T. (1999) Modeling of C4 photosynthesis. In C4 Plant Biology (eds R.F. Sage & R. Monson ), pp. 169207. Academic Press, San Diego, CA.
  • von Caemmerer S. & Furbank R.T. (2003) The C4 pathway: an efficient CO2 pump. Photosynthesis Research 77, 191207.
  • von Caemmerer S., Evans J.R., Hudson G.S. & Andrews T.J. (1994) The kinetics of ribulose-1,5-bisphosphate carboxylase/oxygenase in vivo inferred from measurements of photosynthesis in leaves of transgenic tobacco. Planta 195, 8897.
  • von Caemmerer S., Farquhar G.D. & Berry J.A. (2009) Biochemical model of C3 photosynthesis. In Photosynthesis in Silico. Understanding Complexity from Molecules to Ecosystemns (eds A. Laisk , L. Nedbal & Govindjee ), pp. 209230. Springer, Dordrecht, Netherlands.
  • Collatz G.J., Ball J.T., Grivet C. & Berry J.A. (1991) Physiological and environmental-regulation of stomatal conductance, photosynthesis and transpiration – a model that includes a laminar boundary-layer. Agricultural and Forest Meteorology 54, 107136.
  • Collatz G.J., Ribas-Carbo M. & Berry J.A. (1992) Coupled photosynthesis-stomatal model for leaves of C4 plants. Australian Journal of Plant Physiology 19, 519538.
  • Cousins A.B., Pracharoenwattana I., Zhou W.X., Smith S.M. & Badger M.R. (2008) Peroxisomal malate dehydrogenase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release. Plant Physiology 148, 786795.
  • Cousins A.B., Ghannoum O., von Caemmerer S. & Badger M.R. (2010) Simultaneous determination of Rubisco carboxylase and oxygenase kinetic parameters in Triticum aestivum and Zea mays using membrane inlet mass spectrometry. Plant, Cell & Environment 33, 444452.
  • Cousins A.B., Walker B.J., Pracharoenwattana I., Smith S.M. & Badger M.R. (2011) Peroxisomal hydroxypyruvate reductase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release. Photosynthesis Research 108, 91100.
  • Dreyer E., Le Roux X., Montpied P., Daudet F.A. & Masson F. (2001) Temperature response of leaf photosynthetic capacity in seedlings from seven temperate tree species. Tree Physiology 21, 223232.
  • Edwards G.E. & Voznesenskaya E.V. (2011) C4 photosynthesis: Kranz forms and single-cell C4 in terrestrial plants. In C4 Photosynthesis and Related CO2 Concentrating Mechanisms (eds A.S. Ragavendra & R.F. Sage ), pp. 2961. Springer, Dordrecht, The Netherlands.
  • Ethier G.J. & Livingston N.J. (2004) On the need to incorporate sensitivity to CO2 transfer conductance into the Farquhar-von Caemmerer-Berry leaf photosynthesis model. Plant, Cell & Environment 27, 137153.
  • Evans J.R. (1987) The dependence of quantum yield on wavelength and growth irradiance. Australian Journal of Plant Physiology 14, 6979.
  • Evans J.R. (1989) Photosynthesis and nitrogen relationships in leaves of C3 plants. Oecologia 78, 919.
  • Evans J.R. & von Caemmerer S. (1996) Carbon dioxide diffusion inside leaves. Plant Physiology 110, 339346.
  • Evans J.R. & von Caemmerer S. (2012) Temperature response of carbon isotope discrimination and mesophyll conductance in tobacco. Plant, Cell & Environment 36, 745756.
  • Evans J.R., Sharkey T.D., Berry J.A. & Farquhar G.D. (1986) Carbon isotope discrimination measured concurrently with gas-exchange to investigate CO2 diffusion in leaves of higher plants. Australian Journal of Plant Physiology 13, 281292.
  • Evans J.R., Kaldenhoff R., Genty B. & Terashima I. (2009) Resistances along the CO2 diffusion pathway inside leaves. Journal of Experimental Botany 60, 22352248.
  • Farquhar G.D. (1983) On the nature of carbon isotope discrimination in C4 species. Australian Journal of Plant Physiology 10, 205226.
  • Farquhar G.D. & von Caemmerer S. (1982) Modelling of photosynthetic response to environmental conditions. In Physiological Plant Ecology II. Encyclopedia of Plant Physiology, New Series, Vol. 12 B (eds O.L. Lange , P.S. Nobel , C.B. Osmond & H. Ziegler ), pp. 550587. Springer Verlag, Berlin, Heidelberg.
  • Farquhar G.D. & Wong C.S. (1984) An empirical model of stomatal conductance. Australian Journal of Plant Physiology 11, 191210.
  • Farquhar G.D., von Caemmerer S. & Berry J.A. (1980) A biochemical-model of photosynthetic CO2 assimilation in leaves of C3 species. Planta 149, 7890.
  • Farquhar G.D., O'Leary M.H. & Berry J.A. (1982) On the relationship between carbon isotope discrimination and the intercellular carbon-dioxide concentration in leaves. Australian Journal of Plant Physiology 9, 121137.
  • Farquhar G.D., von Caemmerer S. & Berry J.A. (2001) Models of photosynthesis. Plant Physiology 125, 4245.
  • Flexas J., Ribas-Carbo M., Diaz-Espej A., Galmes J. & Medrano H. (2008) Mesophyll conductance to CO2: current knowledge and future prospects. Plant, Cell & Environment 31, 602621.
  • Galmes J., Flexas J., Keys A.J., Cifre J., Mitchell R.A.C., Madgwick P.J., Haslam R.P., Medrano H. & Parry M.A.J. (2005) Rubisco specificity factor tends to be larger in plant species from drier habitats and in species with persistent leaves. Plant, Cell & Environment 28, 571579.
  • Ghannoum O., Evans J.R., Chow W.S., Andrews T.J., Conroy J.P. & von Caemmerer S. (2005) Faster rubisco is the key to superior nitrogen-use efficiency in NADP-malic enzyme relative to NAD-malic enzyme C4 grasses. Plant Physiology 137, 638650.
  • Gu L.H., Pallardy S.G., Tu K., Law B.E. & Wullschleger S.D. (2010) Reliable estimation of biochemical parameters from C3 leaf photosynthesis-intercellular carbon dioxide response curves. Plant, Cell & Environment 33, 18521874.
  • Hammond E.T., Hudson G.S., Andrews T.J. & Woodrow I.E. (1995) Analysis of Rubisco activation using tobacco with anti-sense RNA to Rubisco activase. In Photosynthesis: From Light to Biosphere (ed. P. Mathis ), pp. 293296. Kluwer Academic Publishers, Dordrecht.
  • Hanson K.R. & Peterson R.B. (1986) Regulation of photorespiration in leaves: evidence that the fraction of ribulose bisphosphate oxygenated is conserved and stoichiometry fluctuates. Archives of Biochemistry and Biophysics 246, 332346.
  • Harley P.C. & Sharkey T.D. (1991) An improved model of C3 photosynthesis at high CO2: reversed O2 sensitivity explained by lack of glycerate reentry into the chloroplast. Photosynthesis Research 27, 169178.
  • Henderson S., von Caemmerer S. & Farquhar G.D. (1992) Short-term measurements of carbon isotope discrimination in several C4 species. Australian Journal of Plant Physiology 19, 263285.
  • June T., Evans J.R. & Farquhar G.D. (2004) A simple new equation for the reversible temperature dependence of photosynthetic electron transport: a study on soybean leaf. Functional Plant Biology 31, 275283.
  • Kebeish R., Niessen M., Thiruveedhi K., Bari R., Hirsch H.J., Rosenkranz R., Stabler N., Schonfeld B., Kreuzaler F. & Peterhansel C. (2007) Chloroplastic photorespiratory bypass increases photosynthesis and biomass production in Arabidopsis thaliana. Nature Biotechnology 25, 593599.
  • King J.L., Edwards G.E. & Cousins A.B. (2012) The efficiency of the CO2-concentrating mechanism during single-cell C4 photosynthesis. Plant, Cell & Environment 35, 513523.
  • Kromdijk J., Griffiths H. & Schepers H.E. (2010) Can the progressive increase of C4 bundle sheath leakiness at low PFD be explained by incomplete suppression of photorespiration? Plant, Cell & Environment 33, 19351948.
  • Kubien D.S., Whitney S.M., Moore P.V. & Jesson L.K. (2008) The biochemistry of Rubisco in Flaveria. Journal of Experimental Botany 59, 17671777.
  • Laisk A. (1977) Kinetics of Photosynthesis and Photorespiration in C3 Plants. Nauka, Moscow.
  • Laisk A. & Edwards G.E. (2000) A mathematical model of C4 photosynthesis: the mechanism of concentrating CO2 in NADP-malic enzyme type species. Photosynthesis Research 66, 199224.
  • Laisk A. & Oja V. (1998) Dynamics of Leaf Photosynthesis: Rapid-Response Measurements and Their Interpretation. CSIRO Publishing, Melbourne.
  • Leegood R.C. & von Caemmerer S. (1988) The relationship between contents of photosynthetic metabolites and the rate of photosynthetic carbon assimilation in the leaves of Amaranthus edulis L. Planta 174, 253265.
  • Leegood R.C. & von Caemmerer S. (1989) Some relationships between contents of photosynthetic intermediates and the rate of photosynthetic carbon assimilation in leaves of Zea mays L. Planta 178, 258266.
  • Long S.P. & Bernacchi C.J. (2003) Gas exchange measurements, what can they tell us about the underlying limitations to photosynthesis ? Procedures and sources of error. Journal of Experimental Botany 54, 23932401.
  • Massad R.S., Tuzet A. & Bethenod O. (2007) The effect of temperature on C4-type leaf photosynthesis parameters. Plant, Cell & Environment 30, 11911204.
  • Monson R.K. & Rawthorne S. (2000) Carbon dioxide assimilation in C3-C4 intermediate plants. In Photosynthesis: Physiology and Metabolism (eds R.C. Leegood , T.D. Sharkey & S. von Caemmerer ), pp. 533550. Kluwer Acad., Dordrecht.
  • Ögren E. & Evans J.R. (1993) Photosynthethic light response curves. I. the influence of CO2 partial pressure and leaf inversion. Planta 189, 182190.
  • Patrick L.D., Ogle K. & Tissue D.T. (2009) A hierarchical Bayesian approach for estimation of photosynthetic parameters of C3 plants. Plant, Cell & Environment 32, 16951709.
  • Peisker M. (1986) Models of carbon metabolism in C3-C4 intermediate plants as applied to the evolution of C4 photosynthesis. Plant, Cell & Environment 9, 627635.
  • Peisker M. & Apel H. (2001) Inhibition by light of CO2 evolution from dark respiration: comparison of two gas exchange methods. Photosynthesis Research 70, 291298.
  • Peisker M. & Henderson S.A. (1992) Carbon – terrestrial C4 plants. Plant, Cell & Environment 15, 9871004.
  • Pengelly J.J.L., Sirault X.R.R., Tazoe Y., Evans J.R., Furbank R.T. & von Caemmerer S. (2010) Growth of the C4 dicot Flaveria bidentis: photosynthetic acclimation to low light through shifts in leaf anatomy and biochemistry. Journal of Experimental Botany 61, 41094122.
  • Pengelly J.J.L., Tan J., Furbank R.T. & von Caemmerer S. (2012) Antisense reduction of NADP-malic enzyme in Flaveria bidentis reduces flow of CO2 through the C4 cycle. Plant Physiology 160, 10701080.
  • Peterhansel C. & Maurino V.G. (2011) Photorespiration redesigned. Plant Physiology 155, 4955.
  • Pons T.L., Flexas J., von Caemmerer S., Evans J.R., Genty B., Ribas-Carbo M. & Brugnoli E. (2009) Estimating mesophyll conductance to CO2: methodology, potential errors, and recommendations. Journal of Experimental Botany 60, 22172234.
  • Price G.D., Badger M.R. & von Caemmerer S. (2011) The prospect of using cyanobacterial bicarbonate transporters to improve leaf photosynthesis in C3 crop plants. Plant Physiology 155, 2026.
  • Qian T., Elings A., Dieleman J.A., Gort G. & Marcelis L.F.M. (2012) Estimation of photosynthesis parameters for a modified Farquhar-von Caemmerer-Berry model using simultaneous estimation method and nonlinear mixed effects model. Environmental and Experimental Botany 82, 6673.
  • Sage R.F. (2002) Variation in the kcat of Rubisco in C3 and C4 plants and some implications for photosynthetic performance at high and low temperature [review]. Journal of Experimental Botany 53, 609620.
  • Sage R.F., Sage T.L. & Kocacinar F. (2012) Photorespiration and the evolution of C4 photosynthesis. Annual Review of Plant Biology 63, 1947.
  • Sage T.L. & Sage R.F. (2009) The functional anatomy of rice leaves: implications for refixation of photorespiratory CO2 and efforts to engineer C4 photosynthesis into rice. Plant and Cell Physiology 50, 756772.
  • Sellers P.J., Randall D.A., Collatz G.J., Berry J.A., Field C.B., Dazlich D.A., Zhang C., Collelo G.D. & Bounoua L. (1996) A revised land surface parameterization (SiB2) for atmospheric GCMs. Part 1: model formulation. Journal of Climate 9, 676705.
  • Sharkey T.D. (1985) Photosynthesis in intact leaves of C3 plants: physics, physiology, and rate limitations. Botanical Review 51, 53105.
  • Sharkey T.D., Bernacchi C.J., Farquhar G.D. & Singsaas E.L. (2007) Fitting photosynthetic carbon dioxide response curves for C-3 leaves. Plant, Cell & Environment 30, 10351040.
  • Sharwood R.E., von Caemmerer S., Maliga P. & Whitney S.M. (2008) The catalytic properties of hybrid Rubisco comprising tobacco small and sunflower large Subunits mirror the kinetically equivalent source Rubiscos and can support tobacco growth. Plant Physiology 146, 8396.
  • Sun W., Ubierna N., Ma J.Y. & Cousins A.B. (2012) The influence of light quality on C4 photosynthesis under steady-state conditions in Zea mays and Miscanthus giganteus: changes in rates of photosynthesis but not the efficiency of the CO2 concentrating mechanism. Plant, Cell & Environment 35, 982993.
  • Tazoe Y., von Caemmerer S., Estavillo G.M. & Evans J.R. (2011) Using tunable diode laser spectroscopy to measure carbon isotope discrimination and mesophyll conductance to CO2 diffusion dynamically at different CO2 concentrations. Plant, Cell & Environment 34, 580591.
  • Tcherkez G., Cornic G., Bligny R., Gout E. & Ghashghaie J. (2005) In vivo respiratory metabolism of illuminated leaves. Plant Physiology 138, 15961606.
  • Tcherkez G., Boex-Fontvieille E., Mahé A. & Hodges M. (2012) Respiratory carbon fluxes in leaves. Current Opinion in Plant Biology 15, 308314.
  • Tcherkez G.G.B., Farquhar G.D. & Andrews T.J. (2006) Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized. Proceedings of the National Academy of Sciences of the United States of America 103, 72467251.
  • Tholen D. & Zhu X.G. (2011) The mechanistic basis of internal conductance: a theoretical analysis of mesophyll cell photosynthesis and CO2 diffusion. Plant Physiology 156, 90105.
  • Tholen D., Ethier G., Genty B., Pepin S. & Zhu X.G. (2012) Variable mesophyll conductance revisited: theoretical background and experimental implications. Plant, Cell & Environment 35, 20872103.
  • Ubierna N., Sun W. & Cousins A.B. (2011) The efficiency of C4 photosynthesis under low light conditions: assumptions and calculations with CO2 isotope discrimination. Journal of Experimental Botany 62, 31193134.
  • Wang Q., Fleisher D.H., Timlin D., Reddy V.R. & Chun J.A. (2012) Quantifying the measurement errors in a portable open gas-exchange system and their effects on the parameterization of Farquhar et al. model for C(3) leaves. Photosynthetica 50, 223238.
  • Wareing P.F., Khalifa M.M. & Treharne K.J. (1968) Rate-limiting processes in photosynthesis at saturating light intensities. Nature 220, 453457.
  • Whitney S.M. & Andrews T.J. (2001) Plastome-encoded bacterial ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) supports photosynthesis and growth in tobacco. Proceedings of the National Academy of Sciences of the United States of America 98, 1473814743.
  • Whitney S.M., von Caemmerer S., Hudson G.S. & Andrews T.J. (1999) Directed mutation of the Rubisco large subunit of tobacco influences photorespiration and growth. Plant Physiology 121, 579588.
  • Xu C.G., Fisher R., Wullschleger S.D., Wilson C.J., Cai M. & McDowell N.G. (2012) Toward a mechanistic modeling of nitrogen limitation on vegetation dynamics. PLoS ONE 7, e37914.
  • Yamori W., Evans J.R. & von Caemmerer S. (2010) Effects of growth and measurement light intensities on temperature dependence of CO2 assimilation rate in tobacco leaves. Plant, Cell & Environment 33, 332343.
  • Yamori W., Nagai T. & Makino A. (2011) The rate-limiting step for CO2 assimilation at different temperatures is influenced by the leaf nitrogen content in several C3 crop species. Plant, Cell & Environment 34, 764777.
  • Yamori W., Masumoto C., Fukayama H. & Makino A. (2012) Rubisco activase is a key regulator of non-steady-state photosynthesis at any leaf temperature and, to a lesser extent, of steady-state photosynthesis at high temperature. Plant Journal 71, 871880.
  • Yin X., Van Oijen M. & Schapendonk A. (2004) Extension of a biochemical model for the generalized stoichiometry of electron transport limited C3 photosynthesis. Plant, Cell & Environment 27, 12111222.
  • Yin X., Harbinson J. & Struik P.C. (2009) A model of the generalised stoichiometry of electron transport limited C3 photosynthesis: development and application. In Photosynthesis in Silico. Understanding Complexity from Molecules to Ecosystems (eds A. Laisk , L. Nedbal & Govindjee ), pp. 247273. Springer, Dordrecht, Netherlands.
  • Yin X.Y. & Struik P.C. (2012) Mathematical review of the energy transduction stoichiometries of C4 leaf photosynthesis under limiting light. Plant, Cell & Environment 35, 12991312.
  • Yin X.Y., Sun Z.P., Struik P.C., Van der Putten P.E.L., Van Ieperen W. & Harbinson J. (2011) Using a biochemical C4 photosynthesis model and combined gas exchange and chlorophyll fluorescence measurements to estimate bundle-sheath conductance of maize leaves differing in age and nitrogen content. Plant, Cell & Environment 34, 21832199.
  • Zelitch I. (1989) Selection and characterization of tobacco plants with novel O2-resistant photosynthesis. Plant Physiology 90, 14571464.
  • Zhu X.G. & Long S.P. (2009) Can increase in rubisco specificity increase carbon gain by whole canopy? A modeling analysis. In Photosynthesis in Silico: Understanding Complexity from Molecules to Ecosystems (eds A. Laisk , L. Nebal & Govindjee ), pp. 401416. Springer, Dordreacht, Netherlands.
  • Zhu X.G., Portis A.R. & Long S.P. (2004) Would transformation of C3 crop plants with foreign Rubisco increase productivity? A computational analysis extrapolating from kinetic properties to canopy photosynthesis. Plant, Cell & Environment 27, 155165.
  • Zhu X.G., de Sturler E. & Long S.P. (2007) Optimizing the distribution of resources between enzymes of carbon metabolism can dramatically increase photosynthetic rate: a numerical simulation using an evolutionary algorithm. Plant Physiology 145, 513526.