SEARCH

SEARCH BY CITATION

References

  • Allen, G.C., Flores-Vergara, M.A., Krasynanski, S., Kumar, S. and Thompson, W.F. (2006) A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide. Nat. Protocol. 1, 23202325.
  • Baum, J.A., Bogaert, T., Clinton, W. et al. (2007) Control of coleopteran insect pests through RNA interference. Nat. Biotechnol. 25, 13221326.
  • Bhaskar, P.B., Venkateshwaran, M., Wu, L., Ane, J.M. and Jiang, J. (2009) Agrobacterium-mediated transient gene expression and silencing: a rapid tool for functional gene assay in potato. PLoS ONE, 4, e5812.
  • Brosnan, C.A. and Voinnet, O. (2011) Cell-to-cell and long-distance siRNA movement in plants: mechanisms and biological implications. Curr. Opin. Plant Biol. 14, 580587.
  • Bushnell, W.R. and Roelfs, A.P., eds). (1984) The cereal rusts. In Origins, Specificity, Structure and Physiology. Orlando, FL: Academic Press, Inc., Vol. I, pp. 1923.
  • Cantu, D., Govindarajulu, M., Kozik, A., Wang, M., Chen, X., Kojima, K.K., Jurka, J., Michelmore, R.W. and Dubcovsky, J. (2011) Next generation sequencing provides rapid access to the genome of Puccinia striiformis f. sp. tritici, the causal agent of wheat stripe rust. PLoS ONE, 6, e24230.
  • Casadevall, A., Nosanchuk, J.D., Williamson, P. and Rodrigues, M.L. (2009) Vesicular transport across the fungal cell wall. Trends Microbiol. 17, 158162.
  • Cervantes-Chávez, J.A., Ali, S. and Bakkeren, G. (2011) Response to environmental stresses, cell-wall integrity, and virulence are orchestrated through the calcineurin pathway in Ustilago hordei. Mol. Plant-Microbe Interact. 24, 219232.
  • Chen, X., Equi, R., Baxter, H., Berk, K., Han, J., Agarwal, S. and Zale, J. (2010) A high-throughput transient gene expression system for switchgrass (Panicum virgatum L.) seedlings. Biotechnol. Biofuels, 3, 9.
  • D'Souza, C.A., Kronstad, J.W., Taylor, G. et al. (2011) Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts. MBio, 2, e0034200310.
  • Dunoyer, P., Brosnan, C.A., Schott, G., Wang, Y., Jay, F., Alioua, A., Himber, C. and Voinnet, O. (2010a) An endogenous, systemic RNAi pathway in plants. EMBO J. 29, 16991712.
  • Dunoyer, P., Schott, G., Himber, C., Meyer, D., Takeda, A., Carrington, J.C. and Voinnet, O. (2010b) Small RNA duplexes function as mobile silencing signals between plant cells. Science, 328, 912916.
  • Duplessis, S., Cuomo, C.A., Lin, Y.-C. et al. (2011) Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Proc. Natl Acad. Sci. USA, 108, 91669171.
  • Egan, J.D., GarcÃa-Pedrajas, M.D., Andrews, D.L. and Gold, S.E. (2009) Calcineurin is an antagonist to PKA protein phosphorylation required for postmating filamentation and virulence, while PP2A is required for viability in Ustilago maydis. Mol. Plant-Microbe Interact. 22, 12931301.
  • Gibbings, D. and Voinnet, O. (2010) Control of RNA silencing and localization by endolysosomes. Trends Cell Biol. 20, 491501.
  • Grimsley, N., Hohn, T., Davies, J.W. and Hohn, B. (1987) Agrobacterium-mediated delivery of infectious maize streak virus into maize plants. Nature, 325, 177179.
  • Guo, J., Dai, X., Xu, J.-R., Wang, Y., Bai, P., Liu, F., Duan, Y., Zhang, H., Huang, L. and Kang, Z. (2011) Molecular characterization of a Fus3/Kss1 type MAPK from Puccinia striiformis f. sp. tritici, PsMAPK1. PLoS ONE, 6, e21895.
  • Haley, B., Foys, B. and Levine, M. (2010) Vectors and parameters that enhance the efficacy of RNAi-mediated gene disruption in transgenic Drosophila. Proc. Natl Acad. Sci. USA, 107, 1143511440.
  • Hamilton, C.M., Frary, A., Lewis, C. and Tanksley, S.D. (1996) Stable transfer of intact high molecular weight DNA into plant chromosomes. Proc. Natl Acad. Sci. USA, 93, 99759979.
  • Hellens, R.P., Allan, A.C., Friel, E.N., Bolitho, K., Grafton, K., Templeton, M.D., Karunairetnam, S., Gleave, A.P. and Laing, W.A. (2005) Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants. Plant Methods, 1, 13.
  • Hensel, G., Kastner, C., Oleszczuk, S., Riechen, J. and Kumlehn, J. (2009) Agrobacterium-mediated gene transfer to cereal crop plants: current protocols for barley, wheat, triticale, and maize. Int. J. Plant Genomics, 2009, 835608.
  • Himber, C., Dunoyer, P., Moissiard, G., Ritzenthaler, C. and Voinnet, O. (2003) Transitivity-dependent and -independent cell-to-cell movement of RNA silencing. EMBO J. 22, 45234533.
  • Himmelbach, A., Zierold, U., Hensel, G., Riechen, J., Douchkov, D., Schweizer, P. and Kumlehn, J. (2007) A set of modular binary vectors for transformation of cereals. Plant Physiol. 145, 11921200.
  • Hoch, H.C., Staples, R.C., Whitehead, B., Comeau, J. and Wolf, E.D. (1987) Signaling for growth orientation and cell differentiation by surface topography in Uromyces. Science, 235, 16591662.
  • Hoekema, A., Hirsch, P.R., Hooykaas, P.J.J. and Schilperoort, R.A. (1983) A binary plant vector strategy based on separation of vir- and T-region of the Agrobacterium tumefaciens Ti-plasmid. Nature, 303, 179180.
  • Holzberg, S., Brosio, P., Gross, C. and Pogue, G.P. (2002) Barley stripe mosaic virus-induced gene silencing in a monocot plant. Plant J. 30, 315327.
  • Hu, G., Kamp, A., Linning, R., Naik, S. and Bakkeren, G. (2007a) Complementation of Ustilago maydis MAPK mutants by a wheat leaf rust, Puccinia triticina homolog: potential for functional analyses of rust genes. Mol. Plant-Microbe Interact. 20, 637647.
  • Hu, G., Linning, R.O.B., McCallum, B. et al. (2007b) Generation of a wheat leaf rust, Puccinia triticina, EST database from stage-specific cDNA libraries. Mol. Plant Pathol. 8, 451467.
  • Huang, G., Allen, R., Davis, E.L., Baum, T.J. and Hussey, R.S. (2006) Engineering broad root-knot resistance in transgenic plants by RNAi silencing of a conserved and essential root-knot nematode parasitism gene. Proc. Natl Acad. Sci. USA, 103, 1430214306.
  • Jackson, A.L., Burchard, J., Schelter, J., Chau, B.N., Cleary, M., Lim, L. and Linsley, P.S. (2006) Widespread siRNA “off-target” transcript silencing mediated by seed region sequence complementarity. RNA, 12, 11791187.
  • Johansen, L.K. and Carrington, J.C. (2001) Silencing on the spot. Induction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system. Plant Physiol. 126, 930938.
  • Kale, S.D. and Tyler, B.M. (2011) Entry of oomycete and fungal effectors into plant and animal host cells. Cell. Microbiol. 13, 18391848.
  • Koncz, C. and Schell, J. (1986) The promoter of TL-DNA gene 5 controls the tissue-specific expression of chimaeric genes carried by a novel type of Agrobacterium binary vector. Mol. Gen. Genet. 204, 383396.
  • Laurie, J., Linning, R. and Bakkeren, G. (2008) Hallmarks of RNA silencing are found in the smut fungus Ustilago hordei but not in its close relative Ustilago maydis. Curr. Genet. 53, 4958.
  • Lawrence, G.J., Dodds, P.N. and Ellis, J.G. (2010) Transformation of the flax rust fungus, Melampsora lini: selection via silencing of an avirulence gene. Plant J. 61, 364369.
  • Lu, Y.-J., Schornack, S., Spallek, T., Geldner, N., Chory, J., Schellmann, S., Schumacher, K., Kamoun, S. and Robatzek, S. (2012) Patterns of plant subcellular responses to successful oomycete infections reveal differences in host cell reprogramming and endocytic trafficking. Cell. Microbiol. 14, 682697.
  • Mao, Y.B., Cai, W.J., Wang, J.W., Hong, G.J., Tao, X.Y., Wang, L.J., Huang, Y.P. and Chen, X.Y. (2007) Silencing a cotton bollworm P450 monooxygenase gene by plant-mediated RNAi impairs larval tolerance of gossypol. Nat. Biotechnol. 25, 13071313.
  • Meyer, D., Pajonk, S., Micali, C., O'Connell, R. and Schulze-Lefert, P. (2009) Extracellular transport and integration of plant secretory proteins into pathogen-induced cell wall compartments. Plant J. 57, 986999.
  • Moldenhauer, J., Moerschbacher, B.M. and van der Westhuizen, A.J. (2006) Histological investigation of stripe rust (Puccinia striiformis f.sp. tritici) development in resistant and susceptible wheat cultivars. Plant. Pathol. 55, 469474.
  • Nakayashiki, H., Kadotani, N. and Mayama, S. (2006) Evolution and diversification of RNA silencing proteins in fungi. J. Mol. Evol. 63 127135.
  • Nguyen, Q.B., Kadotani, N., Kasahara, S., Tosa, Y., Mayama, S. and Nakayashiki, H. (2008) Systematic functional analysis of calcium-signalling proteins in the genome of the rice-blast fungus, Magnaporthe oryzae, using a high-throughput RNA-silencing system. Mol. Microbiol. 68, 13481365.
  • Nowara, D., Gay, A., Lacomme, C., Shaw, J., Ridout, C., Douchkov, D., Hensel, G., Kumlehn, J. and Schweizer, P. (2010) HIGS: host-induced gene silencing in the obligate biotrophic fungal pathogen Blumeria graminis. Plant Cell, 22, 31303141.
  • Palauqui, J.C., Elmayan, T., Pollien, J.M. and Vaucheret, H. (1997) Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions. EMBO J. 16, 47384745.
  • Pall, G.S. and Hamilton, A.J. (2008) Improved northern blot method for enhanced detection of small RNA. Nat. Protocol. 3, 10771084.
  • Scannell, D.R., Frank, A.C., Conant, G.C., Byrne, K.P., Woolfit, M. and Wolfe, K.H. (2007) Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication. Proc. Natl Acad. Sci. USA, 104, 83978402.
  • Scofield, S.R. and Nelson, R.S. (2009) Resources for virus-induced gene silencing in the grasses. Plant Physiol. 149, 152157.
  • Senthil-Kumar, M. and Mysore, K.S. (2011) Caveat of RNAi in plants: the off-target effect. Meth. Mol. Biol. 744, 1325.
  • Song, X., Rampitsch, C., Soltani, B., Mauthe, W., Linning, R., Banks, T., McCallum, B. and Bakkeren, G. (2011) Proteome analysis of wheat leaf rust fungus, Puccinia triticina, infection structures enriched for haustoria. Proteomics, 11, 944963.
  • Tomilov, A.A., Tomilova, N.B., Wroblewski, T., Michelmore, R. and Yoder, J.I. (2008) Trans-specific gene silencing between host and parasitic plants. Plant J. 56, 389397.
  • Uppalapati, S.R., Ishiga, Y., Doraiswamy, V. et al. (2012) Loss of abaxial leaf epicuticular wax in Medicago truncatula irg1/palm1 mutants results in reduced spore differentiation of anthracnose and nonhost rust pathogens. Plant Cell, 24, 353370.
  • Valadi, H., Ekstrom, K., Bossios, A., Sjostrand, M., Lee, J.J. and Lotvall, J.O. (2007) Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat. Cell Biol. 9, 654659.
  • Viaud, M.C., Balhadere, P.V. and Talbot, N.J. (2002) A Magnaporthe grisea cyclophilin acts as a virulence determinant during plant infection. Plant Cell, 14, 917930.
  • Voegele, R.T. and Mendgen, K. (2003) Rust haustoria: nutrient uptake and beyond. New Phytol. 159, 93100.
  • Wang, P., Cardenas, M.E., Cox, G.M., Perfect, J.R. and Heitman, J. (2001) Two cyclophilin A homologs with shared and distinct functions important for growth and virulence of Cryptococcus neoformans. EMBO Rep. 2, 511518.
  • Webb, C.A., Szabo, L.J., Bakkeren, G., Garry, C., Staples, R.C., Eversmeyer, M. and Fellers, J.P. (2006) Transient expression and insertional mutagenesis of Puccinia triticina using biolistics. Funct. Integr. Genomics, 6, 250260.
  • Xu, J., Linning, R., Fellers, J. et al. (2011) Gene discovery in EST sequences from the wheat leaf rust fungus Puccinia triticina sexual spores, asexual spores and haustoria, compared to other rust and corn smut fungi. BMC Genomics, 12, 161.
  • Yin, C., Jurgenson, J.E. and Hulbert, S.H. (2011) Development of a Host-Induced RNAi system in the wheat stripe rust fungus Puccinia striiformis f. sp. tritici. Mol. Plant-Microbe Interact. 24, 554561.