SEARCH

SEARCH BY CITATION

References

  • Adam, Z., Rudella, A. and van Wijk, K.J. (2006) Recent advances in the study of Clp, FtsH and other proteases located in chloroplasts. Curr. Opin. Plant Biol. 9, 234240.
  • Ades, S.E. (2008) Regulation by destruction: design of the sigmaE envelope stress response. Curr. Opin. Microbiol. 11, 535540.
  • Adir, N. (2005) Elucidation of the molecular structures of components of the phycobilisome: reconstructing a giant. Photosynth. Res. 85, 1532.
  • de Alda, J.A., Lichtle, C., Thomas, J.C. and Houmard, J. (2004) Immunolocalization of NblA, a protein involved in phycobilisome turnover, during heterocyst differentiation in cyanobacteria. Microbiology, 150, 13771384.
  • Allen, M.M. and Smith, A.J. (1969) Nitrogen chlorosis in blue-green algae. Arch. Mikrobiol. 69, 114120.
  • Baier, K., Nicklisch, S., Grundner, C., Reinecke, J. and Lockau, W. (2001) Expression of two nblA-homologous genes is required for phycobilisome degradation in nitrogen-starved Synechocystis sp. PCC6803. FEMS Microbiol. Lett. 195, 3539.
  • Baier, K., Lehmann, H., Stephan, D.P. and Lockau, W. (2004) NblA is essential for phycobilisome degradation in Anabaena sp. strain PCC 7120 but not for development of functional heterocysts. Microbiology, 150, 27392749.
  • Baier, A., Winkler, W., Korte, T., Lockau, W. and Karradt, A. (2014). Degradation of phycobilisomes in Synechocystis sp. PCC6803: Evidence for essential formation of an NblA1/NblA2 heterodimer and its codegradation by a Clp protease complex. J. Biol. Chem. 289, 1175511766.
  • Bailey, S. and Grossman, A. (2008) Photoprotection in cyanobacteria: regulation of light harvesting. Photochem. Photobiol. 84, 14101420.
  • Bakker, G.J., Andresen, V., Hoffman, R.M. and Friedl, P. (2012) Fluorescence lifetime microscopy of tumor cell invasion, drug delivery, and cytotoxicity. Methods Enzymol. 504, 109125.
  • Balint, I., Bhattacharya, J., Perelman, A., Schatz, D., Moskovitz, Y., Keren, N. and Schwarz, R. (2006) Inactivation of the extrinsic subunit of photosystem II, PsbU, in Synechococcus PCC 7942 results in elevated resistance to oxidative stress. FEBS Lett. 580, 21172122.
  • Battesti, A. and Gottesman, S. (2013) Roles of adaptor proteins in regulation of bacterial proteolysis. Curr. Opin. Microbiol. 16, 140147.
  • Bienert, R., Baier, K., Volkmer, R., Lockau, W. and Heinemann, U. (2006) Crystal structure of NblA from Anabaena sp. PCC 7120, a small protein playing a key role in phycobilisome degradation. J. Biol. Chem. 281, 52165223.
  • Clarke, A.K. (2012) The chloroplast ATP-dependent Clp protease in vascular plants - new dimensions and future challenges. Physiol. Plant. 145, 235244.
  • Clayton, A.H., Hanley, Q.S. and Verveer, P.J. (2004) Graphical representation and multicomponent analysis of single-frequency fluorescence lifetime imaging microscopy data. J. Microsc. 213, 15.
  • Collier, J.L. and Grossman, A.R. (1994) A small polypeptide triggers complete degradation of light-harvesting phycobiliproteins in nutrient-deprived cyanobacteria. EMBO J. 13, 10391047.
  • Digman, M.A., Caiolfa, V.R., Zamai, M. and Gratton, E. (2008) The phasor approach to fluorescence lifetime imaging analysis. Biophys. J. 94, L14L16.
  • Dines, M., Sendersky, E., David, L., Schwarz, R. and Adir, N. (2008) Structural, functional, and mutational analysis of the NblA protein provides insight into possible modes of interaction with the phycobilisome. J. Biol. Chem. 283, 3033030340.
  • Dougan, D.A., Micevski, D. and Truscott, K.N. (2012) The N-end rule pathway: from recognition by N-recognins, to destruction by AAA+ proteases. Biochim. Biophys. Acta-Mol. Cell Res. 1823, 8391.
  • Gantt, E. (1994) Supramolecular membrane organization. In The Molecular Biology of Cyanobacteria (Chapter 6) (Bryant, A.D., ed.). Dordrecht, the Netherlands: Springer Kluwer Academic Publishers, pp. 119138.
  • Gao, E.B., Gui, J.F. and Zhang, Q.Y. (2012) A novel cyanophage with a cyanobacterial nonbleaching protein A gene in the genome. J. Virol. 86, 236245.
  • Glazer, A.N. (1985) Light harvesting by phycobilisomes. Annu. Rev. Biophys. Biophys. Chem. 14, 4777.
  • Grossman, A.R., Schaefer, M.R., Chiang, G.G. and Collier, J.L. (1993) Environmental effects on the light-harvesting complex of cyanobacteria. J. Bacteriol. 175, 575582.
  • Grossman, A.R., Bhaya, D., Apt, K.E. and Kehoe, D.M. (1995) Light-harvesting complexes in oxygenic photosynthesis: diversity, control, and evolution. Ann. Rev. Genet. 29, 231288.
  • Grossman, A.R., Bhaya, D. and He, Q.F. (2001) Tracking the light environment by cyanobacteria and the dynamic nature of light harvesting. J. Biol. Chem. 276, 1144911452.
  • Gur, E., Biran, D. and Ron, E.Z. (2011) Regulated proteolysis in Gram-negative bacteria – how and when? Nat. Rev. Microbiol. 9, 839848.
  • Hengge, R. (2009) Proteolysis of sigma(S) (RpoS) and the general stress response in Escherichia coli. Res. Microbiol. 160, 667676.
  • Karradt, A., Sobanski, J., Mattow, J., Lockau, W. and Baier, K. (2008) NblA, a key protein of phycobilisome degradation, interacts with ClpC, a HSP100 chaperone partner of a cyanobacterial Clp protease. J. Biol. Chem. 283, 3239432403.
  • Kato, H., Chibazakura, T. and Yoshikawa, H. (2008) NblR is a novel one-component response regulator in the cyanobacterium Synechococcus elongatus PCC 7942. Biosci. Biotechnol. Biochem. 72, 10721079.
  • Kato, H., Kubo, T., Hayashi, M., Kobayashi, I., Yagasaki, T., Chibazakura, T., Watanabe, S. and Yoshikawa, H. (2011) Interactions between histidine kinase NblS and the response regulators RpaB and SrrA are involved in the bleaching process of the cyanobacterium Synechococcus elongatus PCC 7942. Plant Cell Physiol. 52, 21152122.
  • Kawakami, T., Sakaguchi, K., Takechi, K., Takano, H. and Takio, S. (2009) Ammonium induced expression of the red algal chloroplast gene Ycf18, a putative homolog of the cyanobacterial nblA gene Involved in nitrogen deficiency-induced phycobilisome degradation. Biosci. Biotechnol. Biochem. 73, 740743.
  • Kehoe, D.M. (2010) Chromatic adaptation and the evolution of light color sensing in cyanobacteria. Proc. Natl Acad. Sci. USA, 107, 90299030.
  • Kirilovsky, D. and Kerfeld, C.A. (2012) The orange carotenoid protein in photoprotection of photosystem II in cyanobacteria. Biochim. Biophys. Acta, 1817, 158166.
  • Kirstein, J., Moliere, N., Dougan, D.A. and Turgay, K. (2009) Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteases. Nat. Rev. Microbiol. 7, 589599.
  • Lahmi, R., Sendersky, E., Perelman, A., Hagemann, M., Forchhammer, K. and Schwarz, R. (2006) Alanine dehydrogenase activity is required for adequate progression of phycobilisome degradation during nitrogen starvation in Synechococcus elongatus PCC 7942. J. Bacteriol. 188, 52585265.
  • Leganes, F., Forchhammer, K. and Fernandez-Pinas, F. (2009) Role of calcium in acclimation of the cyanobacterium Synechococcus elongatus PCC 7942 to nitrogen starvation. Microbiology, 155, 2534.
  • Li, H. and Sherman, L.A. (2002) Characterization of Synechocystis sp. strain PCC 6803 and delta nbl mutants under nitrogen-deficient conditions. Arch. Microbiol. 178, 256266.
  • Liberton, M., Berg, R.H., Heuser, J., Roth, R. and Pakrasi, H.B. (2006) Ultrastructure of the membrane systems in the unicellular cyanobacterium Synechocystis sp strain PCC 6803. Protoplasma, 227, 129138.
  • Liu, H., Zhang, H., Niedzwiedzki, D.M., Prado, M., He, G., Gross, M.L. and Blankenship, R.E. (2013) Phycobilisomes supply excitations to both photosystems in a megacomplex in cyanobacteria. Science, 342, 11041107.
  • Luque, I., Zabulon, G., Contreras, A. and Houmard, J. (2001) Convergence of two global transcriptional regulators on nitrogen induction of the stress-acclimation gene nblA in the cyanobacterium Synechococcus sp. PCC 7942. Mol. Microbiol. 41, 937947.
  • Luque, I., Ochoa De Alda, J.A., Richaud, C., Zabulon, G., Thomas, J.C. and Houmard, J. (2003) The NblAI protein from the filamentous cyanobacterium Tolypothrix PCC 7601: regulation of its expression and interactions with phycobilisome components. Mol. Microbiol. 50, 10431054.
  • MacColl, R. (1998) Cyanobacterial phycobilisomes. J. Struct. Biol. 124, 311334.
  • van de Meene, A.M., Hohmann-Marriott, M.F., Vermaas, W.F. and Roberson, R.W. (2006) The three-dimensional structure of the cyanobacterium Synechocystis sp. PCC 6803. Arch. Microbiol. 184, 259270.
  • Mogk, A., Schmidt, R. and Bukau, B. (2007) The N-end rule pathway for regulated proteolysis: prokaryotic and eukaryotic strategies. Trends Cell Biol. 17, 165172.
  • Mullineaux, C.W. (1999) The thylakoid membranes of cyanobacteria: structure, dynamics and function. Aust. J. Plant Physiol. 26, 671677.
  • Mullineaux, C.W. (2008) Phycobilisome-reaction centre interaction in cyanobacteria. Photosynth. Res. 95, 175182.
  • Muramatsu, M. and Hihara, Y. (2012) Acclimation to high-light conditions in cyanobacteria: from gene expression to physiological responses. J. Plant. Res. 125, 1139.
  • Nakamura, G., Kimura, S., Sako, Y. and Yoshida, T. (2014). Genetic diversity of Microcystis cyanophages in two different freshwater environments. Arch. Microbiol. 196, 401409.
  • Nevo, R., Charuvi, D., Shimoni, E., Schwarz, R., Kaplan, A., Ohad, I. and Reich, Z. (2007) Thylakoid membrane perforations and connectivity enable intracellular traffic in cyanobacteria. EMBO J. 26, 14671473.
  • Nixon, P.J., Michoux, F., Yu, J., Boehm, M. and Komenda, J. (2010) Recent advances in understanding the assembly and repair of photosystem II. Ann. Bot. 106, 116.
  • Nowaczyk, M.M., Sander, J., Grasse, N., Cormann, K.U., Rexroth, D., Bernat, G. and Rogner, M. (2010) Dynamics of the cyanobacterial photosynthetic network: communication and modification of membrane protein complexes. Eur. J. Cell Biol. 89, 974982.
  • Olinares, P.D., Kim, J. and van Wijk, K.J. (2011) The Clp protease system; a central component of the chloroplast protease network. Biochim. Biophys. Acta, 1807, 9991011.
  • Osanai, T., Sato, S., Tabata, S. and Tanaka, K. (2005) Identification of PamA as a PII-binding membrane protein important in nitrogen-related and sugar-catabolic gene expression in Synechocystis sp. PCC 6803. J. Biol. Chem. 280, 3468434690.
  • Richaud, C., Zabulon, G., Joder, A. and Thomas, J.C. (2001) Nitrogen or sulfur starvation differentially affects phycobilisome degradation and expression of the nblA gene in Synechocystis strain PCC 6803. J. Bacteriol. 183, 29892994.
  • Ruiz, D., Salinas, P., Lopez-Redondo, M.L., Cayuela, M.L., Marina, A. and Contreras, A. (2008) Phosphorylation-independent activation of the atypical response regulator NblR. Microbiology, 154, 30023015.
  • Salinas, P., Ruiz, D., Cantos, R., Lopez-Redondo, M.L., Marina, A. and Contreras, A. (2007) The regulatory factor SipA provides a link between NblS and NblR signal transduction pathways in the cyanobacterium Synechococcus sp PCC 7942. Mol. Microbiol. 66, 16071619.
  • Sauer, R.T. and Baker, T.A. (2011) AAA+ proteases: ATP-fueled machines of protein destruction. Ann. Rev. Biochem. 80, 587612.
  • Sauer, J., Gorl, M. and Forchhammer, K. (1999) Nitrogen starvation in Synechococcus PCC 7942: involvement of glutamine synthetase and NtcA in phycobiliprotein degradation and survival. Arch. Microbiol. 172, 247255.
  • Schatz, D., Nagar, E., Sendersky, E. et al. (2012) Self-suppression of biofilm formation in the cyanobacterium Synechococcus elongatus. Environ. Microbiol. 15, 17861794.
  • Schmidt, R., Bukau, B. and Mogk, A. (2009) Principles of general and regulatory proteolysis by AAA plus proteases in Escherichia coli. Res. Microbiol. 160, 629636.
  • Schwarz, R. and Forchhammer, K. (2005) Acclimation of unicellular cyanobacteria to macronutrient deficiency: emergence of a complex network of cellular responses. Microbiology, 151, 25032514.
  • Schwarz, R. and Grossman, A.R. (1998) A response regulator of cyanobacteria integrates diverse environmental signals and is critical for survival under extreme conditions. Proc. Nat. Acad. Sci. USA, 95, 1100811013.
  • Scruggs, A.W., Flores, C.L., Wachter, R. and Woodbury, N.W. (2005) Development and characterization of green fluorescent protein mutants with altered lifetimes. Biochemistry, 44, 1337713384.
  • Sendersky, E., Lahmi, R., Shaltiel, J., Perelman, A. and Schwarz, R. (2005) NblC, a novel component required for pigment degradation during starvation in Synechococcus PCC 7942. Mol. Microbiol. 58, 659668.
  • Six, C., Thomas, J.C., Garczarek, L., Ostrowski, M., Dufresne, A., Blot, N., Scanlan, D.J. and Partensky, F. (2007). Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study. Genome Biol. 8, R259.1R259.22.
  • Su, H.N., Xie, B.B., Zhang, X.Y., Zhou, B.C. and Zhang, Y.Z. (2010) The supramolecular architecture, function, and regulation of thylakoid membranes in red algae: an overview. Photosynth. Res. 106, 7387.
  • Sun, Y.S., Day, R.N. and Periasamy, A. (2011) Investigating protein-protein interactions in living cells using fluorescence lifetime imaging microscopy. Nat. Protoc. 6, 13241340.
  • Tamary, E., Kiss, V., Nevo, R., Adam, Z., Bernat, G., Rexroth, S., Rogner, M. and Reich, Z. (2012) Structural and functional alterations of cyanobacterial phycobilisomes induced by high-light stress. Biochim. Biophys. Acta. 1817, 319327.
  • Tandeau, D.M. (2003) Phycobiliproteins and phycobilisomes: the early observations. Photosynth. Res. 76, 193205.
  • Tikkanen, M., Grieco, M., Nurmi, M., Rantala, M., Suorsa, M. and Aro, E.M. (2012) Regulation of the photosynthetic apparatus under fluctuating growth light. Philos. Trans. R. Soc. Lond. B Biol. Sci. 367, 34863493.
  • Ting, C.S., Rocap, G., King, J. and Chisholm, S.W. (2002) Cyanobacterial photosynthesis in the oceans: the origins and significance of divergent light-harvesting strategies. Trends Microbiol. 10, 134142.
  • Tyedmers, J., Mogk, A. and Bukau, B. (2010) Cellular strategies for controlling protein aggregation. Nat. Rev. Mol. Cell Biol. 11, 777788.
  • Vass, I. and Aro, E.-M. (2007) Photoinhibition of photosynthetic electron transport. In Primary Processes in Photosynthesis, Comprehensive Series in Photochemical and Photobiological Sciences. (Renger, G., ed). Cambridge, UK: RSC Publishing, The Royal Society of Chemistry, pp. 393425.
  • van Waasbergen, L.G., Dolganov, N. and Grossman, A.R. (2002) nblS, a gene involved in controlling photosynthesis-related gene expression during high light and nutrient stress in Synechococcus elongatus PCC 7942. J. Bacteriol. 184, 24812490.
  • Watanabe, M. and Ikeuchi, M. (2013) Phycobilisome: architecture of a light-harvesting supercomplex. Photosynth. Res. 116, 265276.
  • Yoshida, T., Nagasaki, K., Takashima, Y., Shirai, Y., Tomaru, Y., Takao, Y., Sakamoto, S., Hiroishi, S. and Ogata, H. (2008) Ma-LMM01 infecting toxic Microcystis aeruginosa illuminates diverse cyanophage genome strategies. J. Bacteriol. 190, 17621772.
  • Yoshida-Takashima, Y., Yoshida, M., Ogata, H., Nagasaki, K., Hiroishi, S. and Yoshida, T. (2012) Cyanophage infection in the bloom-forming cyanobacteria Microcystis aeruginosa in surface freshwater. Microbes Environ. 27, 350355.
  • Zabulon, G., Richaud, C., Guidi-Rontani, C. and Thomas, J.C. (2007) NblA gene expression in Synechocystis PCC 6803 strains lacking DspA (Hik33) and a NblR-like protein. Curr. Microbiol. 54, 3641.