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Yu Liu, Lei Zhao, Wentao Li, Dongyu Zhao, Miao Song and Yongliang Yang FIPSDock: A new molecular docking technique driven by fully informed swarm optimization algorithm Journal of Computational Chemistry 34

Version of Record online: 7 SEP 2012 | DOI: 10.1002/jcc.23108

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A novel docking algorithm called FIPSDock is presented, which implements the fully informed particle swarm (FIPS) optimization method and adopts the newly developed scoring function of the AutoDock 4.20 suite. The search ability and docking accuracy of FIPSDock are evaluated by multiple cognate docking experiments and cross-docking experiments. FIPSDock outperforms a few state-of-the-art docking programs and the results reveal that the FIPS algorithm might be suitable in solving highly flexible docking problems.

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