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Austin B. Yongye, Jacob Waddell and José L. Medina-Franco Molecular Scaffold Analysis of Natural Products Databases in the Public Domain Chemical Biology & Drug Design 80

Version of Record online: 31 AUG 2012 | DOI: 10.1111/cbdd.12011

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Publicly available natural products databases were compiled and compared to each other using complementary measures of scaffold diversity including, cumulative scaffold recovery curves and Shannon entropy. The most and least diverse collections were identified. In addition to benzene and acyclic compounds, flavones, coumarins, and flavanones were found as the most frequent molecular scaffolds across the different natural products collections.

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