Chapter

Chapter 2.5 Specification of the core CIF dictionary definition language (DDL1)

  1. S. R. Hall1,
  2. A. P. F. Cook2

Published Online: 1 JAN 2006

DOI: 10.1107/97809553602060000731

Book Title

International Tables for Crystallography

International Tables for Crystallography

Additional Information

How to Cite

Hall, S. R. and Cook, A. P. F. 2006. Specification of the core CIF dictionary definition language (DDL1). International Tables for Crystallography. G:53–60.

Author Information

  1. 1

    School of Biomedical and Chemical Sciences, University of Western Australia, Crawley, Perth, WA 6009, Australia

  2. 2

    BCI Ltd, 46 Uppergate Road, Stannington, Sheffield S6 6BX, England

Publication History

  1. Published Online: 1 JAN 2006

SEARCH

ARTICLE TOOLS

Method public com.opensymphony.module.sitemesh.HTMLPage com.wiley.ol.web.mvc.include.CacheingPageProvider.getPage(java.lang.String) threw an exception when invoked on com.wiley.ol.web.mvc.include.CacheingPageProvider@35b5 The problematic instruction: ---------- ==> ${include.getPage(url).body} [on line 22, column 13 in innerContent.ftl] in include "innerContent.ftl" [on line 10, column 17 in pageContent.ftl] in include "pageContent.ftl" [on line 17, column 13 in default.ftl] ---------- Java backtrace for programmers: ---------- freemarker.template.TemplateModelException: Method public com.opensymphony.module.sitemesh.HTMLPage com.wiley.ol.web.mvc.include.CacheingPageProvider.getPage(java.lang.String) threw an exception when invoked on com.wiley.ol.web.mvc.include.CacheingPageProvider@35b5 at freemarker.ext.beans.SimpleMethodModel.exec(SimpleMethodModel.java:130) at freemarker.core.MethodCall._getAsTemplateModel(MethodCall.java:93) at freemarker.core.Expression.getAsTemplateModel(Expression.java:89) at freemarker.core.Dot._getAsTemplateModel(Dot.java:74) at freemarker.core.Expression.getAsTemplateModel(Expression.java:89) at freemarker.core.Expression.getStringValue(Expression.java:93) at freemarker.core.DollarVariable.accept(DollarVariable.java:76) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.MixedContent.accept(MixedContent.java:92) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.IteratorBlock$Context.runLoop(IteratorBlock.java:179) at freemarker.core.Environment.visit(Environment.java:433) at freemarker.core.IteratorBlock.accept(IteratorBlock.java:102) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.MixedContent.accept(MixedContent.java:92) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.ConditionalBlock.accept(ConditionalBlock.java:79) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.MixedContent.accept(MixedContent.java:92) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.Environment.include(Environment.java:1447) at freemarker.core.Include.accept(Include.java:169) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.MixedContent.accept(MixedContent.java:92) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.IfBlock.accept(IfBlock.java:82) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.Environment.include(Environment.java:1447) at freemarker.core.Include.accept(Include.java:169) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.MixedContent.accept(MixedContent.java:92) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.Environment.process(Environment.java:221) at freemarker.template.Template.process(Template.java:237) at org.springframework.web.servlet.view.freemarker.FreeMarkerView.processTemplate(FreeMarkerView.java:366) at org.springframework.web.servlet.view.freemarker.FreeMarkerView.doRender(FreeMarkerView.java:283) at org.springframework.web.servlet.view.freemarker.FreeMarkerView.renderMergedTemplateModel(FreeMarkerView.java:233) at com.wiley.ol.web.mvc.include.PageProviderFreeMarkerView.renderMergedTemplateModel(PageProviderFreeMarkerView.java:36) at org.springframework.web.servlet.view.AbstractTemplateView.renderMergedOutputModel(AbstractTemplateView.java:167) at org.springframework.web.servlet.view.AbstractView.render(AbstractView.java:250) at org.springframework.web.servlet.DispatcherServlet.render(DispatcherServlet.java:1047) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:817) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:719) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:644) at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:549) at javax.servlet.http.HttpServlet.service(HttpServlet.java:617) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:646) at org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:551) at org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:488) at com.opensymphony.sitemesh.compatability.OldDecorator2NewDecorator.render(OldDecorator2NewDecorator.java:46) at com.opensymphony.sitemesh.webapp.decorator.BaseWebAppDecorator.render(BaseWebAppDecorator.java:36) at com.opensymphony.sitemesh.webapp.SiteMeshFilter.doFilter(SiteMeshFilter.java:84) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.common.cache.CacheManagerFilter.doFilter(CacheManagerFilter.java:22) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.web.filter.ErrorFilter.doFilter(ErrorFilter.java:33) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.web.filter.EuCookieFilter.doFilter(EuCookieFilter.java:48) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.web.filter.ClearSkipDecorationFilter.doFilter(ClearSkipDecorationFilter.java:17) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.web.filter.WileyRequestWrapperFilter.doFilter(WileyRequestWrapperFilter.java:19) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.web.filter.WileyNoCacheFilter.doFilterInternal(WileyNoCacheFilter.java:40) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.web.filter.XmlFilteringServletFilter.doFilterInternal(XmlFilteringServletFilter.java:45) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:378) at com.wiley.ol.ae.identification.IdentityIntegrationFilter.doFilter(IdentityIntegrationFilter.java:42) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.intercept.web.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:109) at org.springframework.security.intercept.web.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:83) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.ui.SessionFixationProtectionFilter.doFilterHttp(SessionFixationProtectionFilter.java:67) at org.springframework.security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java:53) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.ui.ExceptionTranslationFilter.doFilterHttp(ExceptionTranslationFilter.java:101) at org.springframework.security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java:53) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.ui.rememberme.RememberMeProcessingFilter.doFilterHttp(RememberMeProcessingFilter.java:109) at org.springframework.security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java:53) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.wrapper.SecurityContextHolderAwareRequestFilter.doFilterHttp(SecurityContextHolderAwareRequestFilter.java:91) at org.springframework.security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java:53) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.ui.AbstractProcessingFilter.doFilterHttp(AbstractProcessingFilter.java:277) at org.springframework.security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java:53) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.ui.logout.LogoutFilter.doFilterHttp(LogoutFilter.java:89) at org.springframework.security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java:53) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.context.HttpSessionContextIntegrationFilter.doFilterHttp(HttpSessionContextIntegrationFilter.java:235) at org.springframework.security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java:53) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at com.wiley.ol.ae.identification.IdentityFilter.continueFilterChain(IdentityFilter.java:95) at com.wiley.ol.ae.identification.IdentityFilter.doFilter(IdentityFilter.java:50) at org.springframework.security.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:390) at org.springframework.security.util.FilterChainProxy.doFilter(FilterChainProxy.java:175) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.springframework.orm.hibernate3.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:198) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.web.mvc.RequestTimingFilter.doFilter(RequestTimingFilter.java:35) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at com.wiley.ol.filter.exceptionlog.ExceptionLogFilter.doFilter(ExceptionLogFilter.java:43) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:219) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:555) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:857) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:588) at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489) at java.lang.Thread.run(Thread.java:662) Caused by: com.wiley.ol.web.mvc.include.PageProviderException: org.springframework.web.util.NestedServletException: Request processing failed; nested exception is freemarker.template.TemplateModelException: Method public com.opensymphony.module.sitemesh.HTMLPage com.wiley.ol.web.mvc.include.CacheingPageProvider.getPage(java.lang.String) threw an exception when invoked on com.wiley.ol.web.mvc.include.CacheingPageProvider@119642e at com.wiley.ol.web.mvc.include.ServletPageProvider.getPage(ServletPageProvider.java:49) at com.wiley.ol.web.mvc.include.CacheingPageProvider.getPage(CacheingPageProvider.java:24) at sun.reflect.GeneratedMethodAccessor109.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at freemarker.ext.beans.BeansWrapper.invokeMethod(BeansWrapper.java:840) at freemarker.ext.beans.SimpleMethodModel.exec(SimpleMethodModel.java:106) ... 149 more Caused by: org.springframework.web.util.NestedServletException: Request processing failed; nested exception is freemarker.template.TemplateModelException: Method public com.opensymphony.module.sitemesh.HTMLPage com.wiley.ol.web.mvc.include.CacheingPageProvider.getPage(java.lang.String) threw an exception when invoked on com.wiley.ol.web.mvc.include.CacheingPageProvider@119642e at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:656) at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:549) at javax.servlet.http.HttpServlet.service(HttpServlet.java:617) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:646) at org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:551) at org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:488) at com.wiley.ol.web.mvc.include.ServletPageProvider.getPage(ServletPageProvider.java:41) ... 155 more Caused by: freemarker.template.TemplateModelException: Method public com.opensymphony.module.sitemesh.HTMLPage com.wiley.ol.web.mvc.include.CacheingPageProvider.getPage(java.lang.String) threw an exception when invoked on com.wiley.ol.web.mvc.include.CacheingPageProvider@119642e at freemarker.ext.beans.SimpleMethodModel.exec(SimpleMethodModel.java:130) at freemarker.core.MethodCall._getAsTemplateModel(MethodCall.java:93) at freemarker.core.Expression.getAsTemplateModel(Expression.java:89) at freemarker.core.Dot._getAsTemplateModel(Dot.java:74) at freemarker.core.Expression.getAsTemplateModel(Expression.java:89) at freemarker.core.Expression.getStringValue(Expression.java:93) at freemarker.core.DollarVariable.accept(DollarVariable.java:76) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.MixedContent.accept(MixedContent.java:92) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.IfBlock.accept(IfBlock.java:82) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.MixedContent.accept(MixedContent.java:92) at freemarker.core.Environment.visit(Environment.java:240) at freemarker.core.Environment.process(Environment.java:221) at freemarker.template.Template.process(Template.java:237) at org.springframework.web.servlet.view.freemarker.FreeMarkerView.processTemplate(FreeMarkerView.java:366) at org.springframework.web.servlet.view.freemarker.FreeMarkerView.doRender(FreeMarkerView.java:283) at org.springframework.web.servlet.view.freemarker.FreeMarkerView.renderMergedTemplateModel(FreeMarkerView.java:233) at com.wiley.ol.web.mvc.include.PageProviderFreeMarkerView.renderMergedTemplateModel(PageProviderFreeMarkerView.java:36) at org.springframework.web.servlet.view.AbstractTemplateView.renderMergedOutputModel(AbstractTemplateView.java:167) at org.springframework.web.servlet.view.AbstractView.render(AbstractView.java:250) at org.springframework.web.servlet.DispatcherServlet.render(DispatcherServlet.java:1047) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:817) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:719) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:644) ... 164 more Caused by: java.util.EmptyStackException at java.util.Stack.peek(Stack.java:85) at java.util.Stack.pop(Stack.java:67) at org.apache.cocoon.callstack.CallStack.leave(CallStack.java:54) at org.apache.cocoon.servletservice.CallStackHelper.leaveServlet(CallStackHelper.java:85) at org.apache.cocoon.servletservice.ServletServiceContext$PathDispatcher.forward(ServletServiceContext.java:484) at org.apache.cocoon.servletservice.ServletServiceContext$PathDispatcher.forward(ServletServiceContext.java:443) at org.apache.cocoon.servletservice.spring.ServletFactoryBean$ServiceInterceptor.invoke(ServletFactoryBean.java:264) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) at com.sun.proxy.$Proxy127.service(Unknown Source) at org.apache.cocoon.servletservice.DispatcherServlet.service(DispatcherServlet.java:106) at javax.servlet.http.HttpServlet.service(HttpServlet.java:717) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:646) at org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:551) at org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:488) at com.wiley.ol.web.mvc.include.ServletPageProvider.getPage(ServletPageProvider.java:41) at com.wiley.ol.web.mvc.include.CacheingPageProvider.getPage(CacheingPageProvider.java:24) at sun.reflect.GeneratedMethodAccessor109.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at freemarker.ext.beans.BeansWrapper.invokeMethod(BeansWrapper.java:840) at freemarker.ext.beans.SimpleMethodModel.exec(SimpleMethodModel.java:106) ... 189 more