Proteins: Structure, Function, and Bioinformatics

Cover image for Vol. 85 Issue 3

Edited By: Bertrand Garcia-Moreno

Impact Factor: 2.499

ISI Journal Citation Reports © Ranking: 2015: 33/72 (Biophysics); 163/289 (Biochemistry & Molecular Biology)

Online ISSN: 1097-0134

Structure Notes 2007


Volume 69, Issue 3
652-658

X-ray structure of imidazolonepropionase from Agrobacterium tumefaciens at 1.87 Å resolution
Rajiv Tyagi, Desigan Kumaran, Stephen K. Burley, Subramanyam Swaminathan
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 19 Jul 2007
DOI 10.1002/prot.21559

659-664

Crystal structure analysis reveals a novel forkhead-associated domain of ESAT-6 secretion system C protein in Staphylococcus aureus
Yoshikazu Tanaka, Makoto Kuroda, Yoshiaki Yasutake, Min Yao, Kouhei Tsumoto, Nobuhisa Watanabe, Toshiko Ohta, Isao Tanaka
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 6 Aug 2007
DOI 10.1002/prot.21302

665-671

The crystal structure of XC1258 from Xanthomonas campestris : A putative procaryotic Nit protein with an arsenic adduct in the active site
Ko-Hsin Chin, Ying-Der Tsai, Nei-Li Chan, Kai-Fa Huang, Andrew H.-J. Wang, Shan-Ho Chou
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 19 Jul 2007
DOI 10.1002/prot.21501

672-678

Crystal structure of human nucleophosmin-core reveals plasticity of the pentamer-pentamer interface
Hyung Ho Lee, Hyoun Sook Kim, Ji Yong Kang, Byung Il Lee, Jun Yong Ha, Hye Jin Yoon, Seung Oe Lim, Guhung Jung, Se Won Suh
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 17 Aug 2007
DOI 10.1002/prot.21504

679-682

The crystal structure of the effector-binding domain of the trehalose repressor TreR from Bacillus subtilis 168 reveals a unique quarternary assembly
Řezáčová, Veronika Krejčiříková, Dominika Borek, Shiu F. Moy, Andrzej Joachimiak, Zbyszek Otwinowski
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 17 Aug 2007
DOI 10.1002/prot.21516

78:
683-690

The 1.3 Å crystal structure of a novel endo--1,3-glucanase of glycoside hydrolase family 16 from alkaliphilic Nocardiopsis sp. strain F96
Guntur Fibriansah, Sumiko Masuda, Naoya Koizumi, Satoshi Nakamura, Takashi Kumasaka
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 24 Aug 2007
DOI 10.1002/prot.21589

78:
691-694

Crystal structure of the Helicobacter pylori enoyl-acyl carrier protein reductase in complex with hydroxydiphenyl ether compounds, triclosan and diclosan
Hyung Ho Lee, Jinho Moon, Se Won Suh
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 24 Aug 2007
DOI 10.1002/prot.21586

Volume 69, Issue 2
409-414

Crystal structure of a transcriptional activator of comK gene from Bacillus halodurans
Qian Steven Xu, Irina Ankoudinova, Yun Lou, Hisao Yokota, Rosalind Kim, Sung-Hou Kim
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 16 Jul 2007
DOI 10.1002/prot.21262

415-421

Crystal structure of NMA1982 from Neisseria meningitidis at 1.5 Å resolution provides a structural scaffold for nonclassical, eukaryotic-like phosphatases
S. Sri Krishna, Lutz Tautz, Qingping Xu, Daniel McMullan, Mitchell D. Miller, Polat Abdubek, Eileen Ambing, Tamara Astakhova, Herbert L. Axelrod, Dennis Carlton, Hsiu-Ju Chiu, Thomas Clayton, Michael DiDonato, Lian Duan, Marc-André Elsliger, Slawomir K. Grzechnik, Joanna Hale, Eric Hampton, Gye Won Han, Justin Haugen, Lukasz Jaroszewski, Kevin K. Jin, Heath E. Klock, Mark W. Knuth, Eric Koesema, Andrew T. Morse, Tomas Mustelin, Edward Nigoghossian, Silvya Oommachen, Ron Reyes, Christopher L. Rife, Henry van den Bedem, Dana Weekes, Aprilfawn White, Keith O. Hodgson, John Wooley, Ashley M. Deacon, Adam Godzik, Scott A. Lesley, Ian A. Wilson
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 16 Jul 2007
DOI 10.1002/prot.21314

422-427

Crystal structure of an acetyltransferase protein from Vibrio cholerae strain N16961
M.E. Cuff, H. Li, S. Moy, J. Watson, A. Cipriani, A. Joachimiak
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 10 Jul 2007
DOI 10.1002/prot.21417

428-432

Crystal structure of Dim2p: A preribosomal RNA processing factor, from Pyrococcus horikoshii OT3 at 2.30 Å
Min Ze Jia, Jun Ohtsuka, Woo Cheol Lee, Koji Nagata, Masaru Tanokura
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 24 Jul 2007
DOI 10.1002/prot.21381

433-439

Crystal structure of MtnX phosphatase from Bacillus subtilis at 2.0 Å resolution provides a structural basis for bipartite phosphomonoester hydrolysis of 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
Qingping Xu, Kumar Singh Saikatendu, S. Sri Krishna, Daniel McMullan, Polat Abdubek, Sanjay Agarwalla, Eileen Ambing, Tamara Astakhova, Herbert L. Axelrod, Dennis Carlton, Hsiu-Ju Chiu, Thomas Clayton, Michael DiDonato, Lian Duan, Marc-André Elsliger, Julie Feuerhelm, Slawomir K. Grzechnik, Joanna Hale, Eric Hampton, Gye Won Han, Justin Haugen, Lukasz Jaroszewski, Kevin K. Jin, Heath E. Klock, Mark W. Knuth, Eric Koesema, Mitchell D. Miller, Andrew T. Morse, Edward Nigoghossian, Linda Okach, Silvya Oommachen, Jessica Paulsen, Ron Reyes, Christopher L. Rife, Robert Schwarzenbacher, Henry van den Bedem, Aprilfawn White, Guenter Wolf, Keith O. Hodgson, John Wooley, Ashley M. Deacon, Adam Godzik, Scott A. Lesley, Ian A. Wilson
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 25 Jul 2007
DOI 10.1002/prot.21602

440-443

The crystal structure of CagS from the Helicobacter pylori pathogenicity island
Laura Cendron, Elisabetta Tasca, Tommaso Seraglio, Anke Seydel, Alessandro Angelini, Roberto Battistutta, Cesare Montecucco, Giuseppe Zanotti
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 10 Jul 2007
DOI 10.1002/prot.21576

444-447

Solution structure of the hypothetical novel-fold protein TA0956 from Thermoplasma acidophilum
Bon-Kyung Koo, Jinwon Jung, Hyunseob Jung, Hyung Wook Nam, Yu Sam Kim, Adelinda Yee, Weontae Lee
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 16 Jul 2007
DOI 10.1002/prot.21490

Volume 69, Issue 1
192-198

Structural characterization of the neurabin sterile alpha motif domain
Tingting Ju, Michael J. Ragusa, Jebecka Hudak, Angus C. Nairn, Wolfgang Peti
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 28 Jun 2007
DOI 10.1002/prot.21513

199-203

Crystal structure of ACE19, the collagen binding subdomain of Enterococus faecalis surface protein ACE
Karthe Ponnuraj, Sthanam V. L. Narayana
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 7 Jun 2007
DOI 10.1002/prot.21464

204-208

Crystal structure of thioredoxin domain of ST2123 from thermophilic archaea Sulfolobus tokodaii strain7
Hua Ming, Yusuke Kato, Ken-ichi Miyazono, Kosuke Ito, Masayuki Kamo, Koji Nagata, Masaru Tanokura
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 7 Jun 2007
DOI 10.1002/prot.21467

209-212

The crystal structure of Trypanosoma cruzi arginine kinase
Pablo Fernandez, Ahmed Haouz, Claudio A. Pereira, Carlos Aguilar, Pedro M. Alzari
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 10 Jul 2007
DOI 10.1002/prot.21456

Volume 68, Issue 4
999-1005

Crystal structure of homoserine O-succinyltransferase from Bacillus cereus at 2.4 Å resolution
Chloe Zubieta, S. Sri Krishna, Daniel McMullan, Mitchell D. Miller, Polat Abdubek, Sanjay Agarwalla, Eileen Ambing, Tamara Astakhova, Herbert L. Axelrod, Dennis Carlton, Hsiu-Ju Chiu, Thomas Clayton, Marc Deller, Michael DiDonato, Lian Duan, Marc-André Elsliger, Slawomir K. Grzechnik, Joanna Hale, Eric Hampton, Gye Won Han, Justin Haugen, Lukasz Jaroszewski, Kevin K. Jin, Heath E. Klock, Mark W. Knuth, Eric Koesema, Abhinav Kumar, David Marciano, Andrew T. Morse, Edward Nigoghossian, Silvya Oommachen, Ron Reyes, Christopher L. Rife, Henry van den Bedem, Dana Weekes, Aprilfawn White, Qingping Xu, Keith O. Hodgson, John Wooley, Ashley M. Deacon, Adam Godzik, Scott A. Lesley, Ian A. Wilson
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 1 Jun 2007
DOI 10.1002/prot.21208

1006-1010

XC5848, an ORFan protein from Xanthomonas campestris , adopts a novel variant of Sm-like motif
Ko-Hsin Chin, Sz-Kai Ruan, Andrew H.-J. Wang, Shan-Ho Chou
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 1 Jun 2007
DOI 10.1002/prot.21375

1011-1015

The crystal structure of the catalytic domain of the chick retinal neurite inhibitor - receptor protein tyrosine phosphatase CRYP-2/cPTPRO
T.S. Girish, B. Gopal
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 1 Jun 2007
DOI 10.1002/prot.21424

1016-1019

Crystal structure of the tRNA-specific adenosine deaminase from Streptococcus pyogenes
Won-Ho Lee, Young Kwan Kim, Ki Hyun Nam, Amit Priyadarshi, Eun Hye Lee, Eunice Eunkyeong Kim, Young Ho Jeon, Chaejoon Cheong, Kwang Yeon Hwang
Abstract PDF Full Text (Size: 261k) HTML Full Text
Published Online: 6 Jun 2007
DOI 10.1002/prot.21456

Volume 68, Issue 3
789-795

Solution NMR structure of Escherichia coli ytfP expands the structural coverage of the UPF0131 protein domain family

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