Cover image for Vol. 17 Issue 17-18

Editor: Lorna Stimson (Editor-in-Chief), Deputy Editor: Lucie Kalvodova

Impact Factor: 4.041

ISI Journal Citation Reports © Ranking: 2016: 15/77 (BIOCHEMICAL RESEARCH METHODS); 79/286 (Biochemistry & Molecular Biology)

Online ISSN: 1615-9861

Associated Title(s): PROTEOMICS - Clinical Applications

The supplementary issue series PRACTICAL PROTEOMICS focuses on all the practical aspects of proteome research. It serves the purposes of education & training and provides the information source for the current trends in the standardization process in the fi eld.

PRACTICAL PROTEOMICS shows the proper usage
of laboratory and computer methods in proteome research.
PRACTICAL PROTEOMICS covers all methodological steps
from sample preparation through 2-D gel electrophoresis, liquid chromatography, mass spectrometry, protein arrays and bioinformatics.
through the jungle of the numerous methods to be found in the scientific literature.
PRACTICAL PROTEOMICS gives problem-oriented practical instructions
on how to obtain reliable and reproducible research results.
PRACTICAL PROTEOMICS serves as a publication platform
for contributions resulting from the HUPO and EuPA Training & Education activities.

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Focus on the Practical Aspects
Hans-Joachim Kraus



 Education & Training

How to Analyze Protein Complexes by 2D Blue Native SDS-PAGE
Veronika Reisinger and Lutz Andreas Eichacker
Supporting information


High-performance Proteomics as a Tool in Biomarker Discovery
Helmut E. Meyer and Kai Stühler




Submit Your Interaction Data the IMEx Way
A Step by Step Guide to Trouble-free Deposition
Sandra Orchard, Samuel Kerrien, Philip Jones, Arnaud Ceol, Andrew Chatr-aryamontri, Lukasz Salwinski, Jason Nerothin and Henning Hermjakob


 Standardization Report

An Update on Data Standards for Gel Electrophoresis
Andrew R. Jones and Frank Gibson



 Statistical Tools

Design and Analysis Issues in Quantitative Proteomics Studies
Natasha A. Karp and Kathryn S. Lilley


Extracting Protein Regulatory Networks with Graphical Models
Marco Grzegorczyk



 Wet Lab

Frequently Made Mistakes in Electrophoresis
Reiner Westermeier



 Practical Reviews

Lyophilization, a Practical Way to Store and Transport Tissues Prior to Protein Extraction for 2DE Analysis?
Sebastien C. Carpentier, Koen Dens, Ines Van den Houwe, Rony Swennen and Bart Panis


Separation-based Glycoprofiling Approaches using Fluorescent Labels
Paula Jane Domann, Ana Carmen Pardos-Pardos, Daryl Ludger Fernandes, Daniel Ian Richard Spencer, Catherine Mavis Radcliffe, Louise Royle, Raymond Allen Dwek and Pauline Mary Rudd
Supporting information


Serum Peptide Profiling using MALDI Mass Spectrometry
Avoiding the Pitfalls of Coated Magnetic Beads using Well-established ZipTip Technology
Ali Tiss, Celia Smith, Stephane Camuzeaux, Musarat Kabir, Simon Gayther, Usha Menon, Mike Waterfi eld, John Timms, Ian Jacobs and Rainer Cramer
Supporting information




Promoting Proteomics Knowledge in Europe
Report on the Activities of the EuPA Education Committee 2006-2007
Juan Pablo Albar, Garry L. Corthals, Concha Gil, Peter James, Ole N. Jensen, Patricia M. Palagi and Deborah Penque