PROTEOMICS - Clinical Applications

Cover image for Vol. 9 Issue 1-2

Accepted Articles (Accepted, unedited articles published online and citable. The final edited and typeset version of record will appear in future.)

Edited By: Michael J. Dunn

Impact Factor: 2.683

ISI Journal Citation Reports © Ranking: 2013: 33/78 (BIOCHEMICAL RESEARCH METHODS)

Online ISSN: 1862-8354

Associated Title(s): PROTEOMICS


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  1. Reviews

    1. State- of-the-art nano-platform integrated MALDI-MS impacting resolutions in urinary proteomics

      Judy Gopal, Manikandan Muthu, Se-Chul Chun and Hui-Fen Wu

      Accepted manuscript online: 3 MAR 2015 04:43AM EST | DOI: 10.1002/prca.201400182

  2. Research Articles

    1. Detection of urinary biomarkers in reservoir hosts of leptospirosis by capillary electrophoresis mass spectrometry

      J. E. Nally, W. Mullen, J.J. Callanan, H. Mischak and A. Albalat

      Accepted manuscript online: 3 MAR 2015 04:43AM EST | DOI: 10.1002/prca.201400205

    2. Salivary proline-rich proteins and gluten: Do structural similarities suggest a role in celiac disease?

      Na Tian, Irene Messana, Daniel A. Leffler, Ciaran P. Kelly, Joshua Hansen, Tiziana Cabras, Alfredo D'Alessandro, Detlef Schuppan, Massimo Castagnola and Eva J. Helmerhorst

      Accepted manuscript online: 27 FEB 2015 05:08AM EST | DOI: 10.1002/prca.201400170

    3. A proteomic study of the regulatory role for STAT-1 in cytokine-induced beta-cell death

      D Rondas, V Gudmundsdottir, W D'Hertog, I Crèvecoeur, E Waelkens, S Brunak, C Mathieu and L Overbergh

      Accepted manuscript online: 24 FEB 2015 04:47AM EST | DOI: 10.1002/prca.201400124

    4. Discovery of novel candidate urinary protein biomarkers for prostate cancer in a multi-ethnic cohort of South African patients via label-free mass spectrometry

      Henry A. Adeola, Nelson C. Soares, Juliano D. Paccez, Lisa Kaestner, Jonathan M. Blackburn and Luiz F. Zerbini

      Accepted manuscript online: 24 FEB 2015 04:46AM EST | DOI: 10.1002/prca.201400197

  3. Reviews

    1. Proteomic tools for the characterization of cell death mechanisms in drug discovery

      Veronica G. Anania and Jennie R. Lill

      Accepted manuscript online: 24 FEB 2015 04:46AM EST | DOI: 10.1002/prca.201400151

  4. Research Articles

    1. Affinity proteomics discovers decreased levels of AMFR in plasma from Osteoporosis patients

      Ulrika Qundos, Kimi Drobin, Cecilia Mattsson, Mun-Gwan Hong, Ronald Sjöberg, Björn Forsström, David Solomon, Mathias Uhlén, Peter Nilsson, Karl Michaëlsson and Jochen M Schwenk

      Accepted manuscript online: 16 FEB 2015 11:48PM EST | DOI: 10.1002/prca.201400167

    2. Characterization of a human pluripotent stem cell-derived model of neuronal development using multiplexed targeted proteomics

      Tom Dunkley, Veronica Costa, Arno Friedlein, Sebastian Lugert, Stefan Aigner, Martin Ebeling, Meghan T. Miller, Christoph Patsch, Paolo Piraino, Paul Cutler and Ravi Jagasia

      Accepted manuscript online: 13 FEB 2015 03:50AM EST | DOI: 10.1002/prca.201400150

  5. Reviews

    1. Exosomes in bodily fluids are a highly stable resource of disease biomarkers

      Stephanie Boukouris and Suresh Mathivanan

      Accepted manuscript online: 13 FEB 2015 03:49AM EST | DOI: 10.1002/prca.201400114

    2. Relative vs absolute quantitation in disease glycomics

      Edward S.X. Moh, Morten Thaysen-Andersen and Nicolle H. Packer

      Accepted manuscript online: 13 FEB 2015 03:48AM EST | DOI: 10.1002/prca.201400184

  6. Research Articles

    1. Development and Evaluation of a Multiplexed Mass Spectrometry-Based Assay for Measuring Candidate Peptide Biomarkers in Alzheimer's Disease Neuroimaging Initiative (ADNI) CSF

      Daniel S. Spellman, Kristin R. Wildsmith, Lee A. Honigberg, Marianne Tuefferd, David Baker, Nandini Raghavan, Angus C. Nairn, Pascal Croteau, Michael Schirm, Rene Allard, Julie Lamontagne, Daniel Chelsky, Steven Hoffmann, William Z. Potter, Alzheimer's Disease Neuroimaging Initiative and The Foundation for NIH (FNIH) Biomarkers Consortium CSF Proteomics Project Team

      Accepted manuscript online: 11 FEB 2015 06:20AM EST | DOI: 10.1002/prca.201400178

  7. Reviews

    1. Impact of allele-specific peptides in proteome quantification

      Linfeng Wu and Michael Snyder

      Accepted manuscript online: 11 FEB 2015 06:18AM EST | DOI: 10.1002/prca.201400126

  8. Research Articles

    1. Impact of upfront cellular enrichment by laser capture microdissection on protein and phosphoprotein drug target signaling activation measurements in human lung cancer: Implications for personalized medicine

      Elisa Baldelli, Eric B. Haura, Lucio Crinò, W. Douglas Cress, Vienna Ludovini, Matthew B. Schabath, Lance A. Liotta, Emanuel F. Petricoin and Mariaelena Pierobon

      Accepted manuscript online: 11 FEB 2015 06:18AM EST | DOI: 10.1002/prca.201400056

    2. Microarray based identification of human antibodies against Staphylococcus aureus antigens

      Peggy Kloppot, Martina Selle, Christian Kohler, Sebastian Stentzel, Stephan Fuchs, Volkmar Liebscher, Elke Müller, Devika Kale, Knut Ohlsen, Barbara M. Bröker, Peter F. Zipfel, Barbara C. Kahl, Ralf Ehricht, Michael Hecker and Susanne Engelmann

      Accepted manuscript online: 11 FEB 2015 06:18AM EST | DOI: 10.1002/prca.201400123

  9. Reviews

    1. The role of quantitative ADME proteomics to support construction of physiologically-based pharmacokinetic models for use in small molecule drug development

      Aki T. Heikkinen, Floriane Lignet, Paul Cutler and Neil Parrott

      Accepted manuscript online: 11 FEB 2015 06:17AM EST | DOI: 10.1002/prca.201400147

  10. Research Articles

    1. Towards the definition of a Peptidome Signature and Protease Profile in Chronic Periodontitis

      Fábio Trindade, Francisco Amado, Rui P. Oliveira-Silva, Ana L. Daniel-da-Silva, Rita Ferreira, Julie Klein, Ricardo Faria-Almeida, Pedro S. Gomes and Rui Vitorino

      Accepted manuscript online: 8 FEB 2015 10:22PM EST | DOI: 10.1002/prca.201400191

    2. Effect of transient blood glucose increases after oral glucose intake on the human urinary proteome

      Menglin Li, Mindi Zhao and Youhe Gao

      Accepted manuscript online: 6 FEB 2015 12:33AM EST | DOI: 10.1002/prca.201400174

    3. Identification of new phosphorylation sites of AMPA receptors in the rat hippocampus-A ressource for neuroscience research

      Maryam Ghafari, Soheil Keihan Falsafi, Harald Höger, Keiryn L. Bennett and Gert Lubec

      Accepted manuscript online: 6 FEB 2015 12:33AM EST | DOI: 10.1002/prca.201400057

  11. Viewpoint

    1. Is label-free LC-MS/MS ready for biomarker discovery?

      Marianne Sandin, Aakash Chawade and Fredrik Levander

      Accepted manuscript online: 5 FEB 2015 08:42AM EST | DOI: 10.1002/prca.201400202

  12. Research Articles

    1. Screening protein isoforms predictive for cancer using immuno-affinity capture and fast LC-MS in PRM mode

      Antoine Lesur, Lina Ancheva, Yeoun Jin Kim, Guy Berchem, Jan van Oostrum and Bruno Domon

      Accepted manuscript online: 5 FEB 2015 08:41AM EST | DOI: 10.1002/prca.201400158

  13. Reviews

    1. The beta-cell in type 1 diabetes, what have we learned from proteomic studies?

      Inne Crèvecoeur, Dieter Rondas, Chantal Mathieu and Lut Overbergh

      Accepted manuscript online: 30 JAN 2015 03:04AM EST | DOI: 10.1002/prca.201400135

    2. Review of methods for determination of total protein and peptide concentration in biological samples

      Christine V. Sapan and Roger L. Lundblad

      Accepted manuscript online: 30 JAN 2015 03:04AM EST | DOI: 10.1002/prca.201400088

  14. Research Articles

    1. Programmed cell death 6-interacting protein (PDCD6IP) and Rabenosyn-5 (ZFYVE20) are potential urinary biomarkers for upper gastrointestinal cancer

      Holger Husi, Richard J.E. Skipworth, Andrew Cronshaw, Nathan A. Stephens, Henning Wackerhage, Carolyn Greig, Kenneth C. H. Fearon and James A. Ross

      Accepted manuscript online: 30 JAN 2015 03:03AM EST | DOI: 10.1002/prca.201400111

  15. Reviews

    1. Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics

      Eric W. Deutsch, Luis Mendoza, David Shteynberg, Joseph Slagel, Zhi Sun and Robert L. Moritz

      Accepted manuscript online: 29 JAN 2015 07:57AM EST | DOI: 10.1002/prca.201400164

    2. Urinary proteomics and metabolomics in the diagnosis of pediatric disorders

      Kannan Vaidyanathan

      Accepted manuscript online: 29 JAN 2015 07:57AM EST | DOI: 10.1002/prca.201400093

    3. Salivary proteomics and biomarkers in neurology and psychiatry

      Kelly L. Wormwood, Roshanak Aslebagh, Devika Channaveerappa, Emmalyn J. Dupree, Megan M. Borland, Jeanne P. Ryan, Costel C. Darie and Alisa G. Woods

      Accepted manuscript online: 29 JAN 2015 07:57AM EST | DOI: 10.1002/prca.201400153

  16. Research Articles

    1. Global cPILOT analysis of the APP/PS-1 mouse liver proteome

      Adam R. Evans, Liqing Gu, Rodolfo Guerrero Jr. and Renã A.S. Robinson

      Accepted manuscript online: 24 JAN 2015 02:57AM EST | DOI: 10.1002/prca.201400149

  17. Viewpoints

    1. Mass spectrometry imaging for the proteomic study of clinical tissue

      Laura M. Cole and Malcolm R. Clench

      Accepted manuscript online: 24 JAN 2015 02:56AM EST | DOI: 10.1002/prca.201400103

    2. Can proteomics-based diagnostics aid clinical psychiatry?

      Michaela D. Filiou

      Accepted manuscript online: 24 JAN 2015 02:56AM EST | DOI: 10.1002/prca.201400144

  18. Reviews

    1. You have full text access to this OnlineOpen article
      ELISA in the Multiplex Era; Potential and Pitfalls

      Patrick J Tighe, Richard R Ryder, Ian Todd and Lucy C Fairclough

      Accepted manuscript online: 23 JAN 2015 07:11AM EST | DOI: 10.1002/prca.201400130

    2. Urine proteomic studies in preeclampsia

      Aggeliki Kolialexi, Danai Mavreli, Georgia Tounta, Ariadni Mavrou and Nikolas Papantoniou

      Accepted manuscript online: 23 JAN 2015 07:11AM EST | DOI: 10.1002/prca.201400092

    3. Capillary zone electrophoresis on-line coupled to mass spectrometry: a perspective application for clinical proteomics

      Martin Pejchinovski, Dajana Hrnjez, Adela Ramírez-Torres, Vasiliki Bitsika, George Mermelekas, Antonia Vlahou, Petra Zürbig, Harald Mischak, Jochen Metzger and Thomas Koeck

      Accepted manuscript online: 16 JAN 2015 08:26AM EST | DOI: 10.1002/prca.201400113

    4. CE-MS-based proteomics in biomarker discovery and clinical application

      Claudia Pontillo, Szymon Filip, Daniel M. Borràs, William Mullen, Antonia Vlahou and Harald Mischak

      Accepted manuscript online: 16 JAN 2015 08:23AM EST | DOI: 10.1002/prca.201400115

    5. Western blotting re-visited: critical perusal of under-appreciated technical issues

      Thomas A. Gorr and Johannes Vogel

      Accepted manuscript online: 16 JAN 2015 08:22AM EST | DOI: 10.1002/prca.201400118

  19. Research Articles

    1. MALDI-TOF MS applied to apoC-III glycoforms of patients with congenital disorders affecting O-glycosylation. Comparison with two-dimensional electrophoresis

      Stéphanie Yen-Nicolaÿ, Céline Boursier, Marlène Rio, Dirk J. Lefeber, Antoine Pilon, Nathalie Seta and Arnaud Bruneel

      Accepted manuscript online: 12 JAN 2015 06:17AM EST | DOI: 10.1002/prca.201400187

  20. Reviews

    1. Using tissue samples for proteomic studies – critical considerations

      Karl-Friedrich Becker

      Accepted manuscript online: 12 JAN 2015 06:15AM EST | DOI: 10.1002/prca.201400106

  21. Viewpoint

    1. Proteomics of a conundrum: thoughts on addressing the aetiology vs. progression of Multiple Sclerosis

      Melissa A. Partridge, Simon J. Myers, Sumana Gopinath and Jens R. Coorssen

      Accepted manuscript online: 8 JAN 2015 08:20AM EST | DOI: 10.1002/prca.201400141

  22. Reviews

  23. Research Articles

    1. Capillary-Channeled Polymer (C-CP) fibers for the rapid extraction of proteins from urine matrices prior to detection with MALDI-MS

      Benjamin T. Manard, Sarah M.H. Jones and R. Kenneth Marcus

      Accepted manuscript online: 29 NOV 2014 04:22AM EST | DOI: 10.1002/prca.201400081

    2. Quantitative proteomics analysis by iTRAQ in human nuclear cataracts of different ages and normal lens nuclei

      Hai Yan Zhou, Hong Yan, Li Li Wang, Yan WeiJia, Ying Bo Shui and David C Beebe

      Accepted manuscript online: 24 NOV 2014 04:11AM EST | DOI: 10.1002/prca.201400061

    3. Proteomic investigation of the impact of oxygen on the protein profiles of hyaluronic acid-producing Streptococcus zooepidemicus

      Ting-Feng Wu, Wei-Chih Huang, Yi-Chun Chen, Yeou-Guang Tsay and Chun-Sheng Chang

      Article first published online: 7 OCT 2009 | DOI: 10.1002/prca.200800868


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