Physiologia Plantarum

© Physiologia Plantarum

Cover image for Vol. 148 Issue 2

Early View (Online Version of Record published before inclusion in an issue)

Edited By: Vaughan Hurry

Impact Factor: 3.112

ISI Journal Citation Reports © Ranking: 2011: 28/190 (Plant Sciences)

Online ISSN: 1399-3054

  1. Original Articles

    1. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping

      M. Awais Khan, Youfu (Frank) Zhao and Schuyler S. Korban

      Article first published online: 23 MAY 2013 | DOI: 10.1111/ppl.12068

    2. Identification and biosynthesis of acylphloroglucinols in Hypericum gentianoides

      Matthew C. Crispin, Manhoi Hur, Taeseong Park, Young Hwan Kim and Eve Syrkin Wurtele

      Article first published online: 23 MAY 2013 | DOI: 10.1111/ppl.12063

    3. Nep1-like protein from Moniliophthora perniciosa induces a rapid proteome and metabolome reprogramming in cells of Nicotiana benthamiana

      Cristiano Villela-Dias, Luciana R. Camillo, Guilherme A. P. de Oliveira, Jamilly A. L. Sena, André S. Santiago, Sanderson T. P. de Sousa, Juliano S. Mendes, Carlos P. Pirovani, Fátima C. Alvim and Marcio G. C. Costa

      Article first published online: 16 MAY 2013 | DOI: 10.1111/ppl.12061

    4. A lack of mitochondrial alternative oxidase compromises capacity to recover from severe drought stress

      Jia Wang and Greg C. Vanlerberghe

      Article first published online: 14 MAY 2013 | DOI: 10.1111/ppl.12059

  2. EDITORIALS

    1. Functional genomics, challenges and perspectives for the future

      Ron Mittler and Vladimir Shulaev

      Article first published online: 11 MAY 2013 | DOI: 10.1111/ppl.12060

  3. Original Articles

    1. The identification of candidate radio marker genes using a coexpression network analysis in gamma-irradiated rice

      Sun-Hee Kim, Sun-Goo Hwang, Jung Eun Hwang, Cheol Seong Jang, Vijayanand Velusamy, Jin-Baek Kim, Sang Hoon Kim, Bo-Keun Ha, Si-Yong Kang and Dong Sub Kim

      Article first published online: 26 APR 2013 | DOI: 10.1111/ppl.12058

    2. C4 plants use fluctuating light less efficiently than do C3 plants: a study of growth, photosynthesis and carbon isotope discrimination

      Jiří Kubásek, Otmar Urban and Jiří Šantrůček

      Article first published online: 24 APR 2013 | DOI: 10.1111/ppl.12057

    3. Ability of leaf mesophyll to retain potassium correlates with salinity tolerance in wheat and barley

      Honghong Wu, Lana Shabala, Karen Barry, Meixue Zhou and Sergey Shabala

      Article first published online: 24 APR 2013 | DOI: 10.1111/ppl.12056

    4. SRNAome parsing yields insights into tomato fruit ripening control

      Jinhua Zuo, Daqi Fu, Yi Zhu, Guiqin Qu, Huiqin Tian, Baiqiang Zhai, Zheng Ju, Chao Gao, Yunxiang Wang, Yunbo Luo and Benzhong Zhu

      Article first published online: 23 APR 2013 | DOI: 10.1111/ppl.12055

    5. Genetic variation, heritability, divergence and biomass accumulation of rice genotypes resistant to bacterial blight revealed by quantitative traits and ISSR markers

      Muhammad S. Mazid, Mohd Y. Rafii, Mohamed M. Hanafi, Harun A. Rahim and Md Abdul Latif

      Article first published online: 16 APR 2013 | DOI: 10.1111/ppl.12054

    6. Regulatory mechanisms after short- and long-term perturbed lysine biosynthesis in the aspartate pathway: the need for isogenes in Arabidopsis thaliana

      Pieter Van Bochaute, Alexandre Novoa, Steven Ballet, Sven Erik Rognes and Geert Angenon

      Article first published online: 15 APR 2013 | DOI: 10.1111/ppl.12053

    7. Two cytosolic aldolases show different expression patterns during shoot elongation in Moso bamboo, Phyllostachys pubescens Mazel

      Xintian Lao, Jun-ichi Azuma and Masahiro Sakamoto

      Article first published online: 15 APR 2013 | DOI: 10.1111/ppl.12052

    8. Combination treatment of elevated UVB radiation, CO2 and temperature has little effect on silver birch (Betula pendula) growth and phytochemistry

      Anu Lavola, Line Nybakken, Matti Rousi, Jyrki Pusenius, Mari Petrelius, Seppo Kellomäki and Riitta Julkunen-Tiitto

      Article first published online: 15 APR 2013 | DOI: 10.1111/ppl.12051

    9. Correlation between hormonal homeostasis and morphogenic responses in Arabidopsis thaliana seedlings growing in a Cd/Cu/Zn multi-pollution context

      Adriano Sofo, Antonella Vitti, Maria Nuzzaci, Giuseppe Tataranni, Antonio Scopa, Jaco Vangronsveld, Tony Remans, Giuseppina Falasca, Maria M. Altamura, Francesca Degola and Luigi Sanità di Toppi

      Article first published online: 10 APR 2013 | DOI: 10.1111/ppl.12050

    10. The multiple stress-responsive transcription factor SlNAC1 improves the chilling tolerance of tomato

      Na-Na Ma, Yan-Qiu Zuo, Xiao-Qing Liang, Bo Yin, Guo-Dong Wang and Qing-Wei Meng

      Article first published online: 10 APR 2013 | DOI: 10.1111/ppl.12049

    11. Ectopic expression of wheat TaCIPK14, encoding a calcineurin B-like protein-interacting protein kinase, confers salinity and cold tolerance in tobacco

      Xiaomin Deng, Shiyi Zhou, Wei Hu, Jialu Feng, Fan Zhang, Lihong Chen, Chao Huang, Qingchen Luo, Yanzhen He, Guangxiao Yang and Guangyuan He

      Article first published online: 9 APR 2013 | DOI: 10.1111/ppl.12046

    12. Isolation and functional analysis of a homolog of flavonoid 3′,5′-hydroxylase gene from Pericallis  ×  hybrida

      Yi Sun, He Huang, Li Meng, Ke Hu and Si-Lan Dai

      Article first published online: 9 APR 2013 | DOI: 10.1111/ppl.12034

    13. Willow seedlings from photooxidized seeds accelerate cotyledon death and anticipate first leaf emergence: a histological and biochemical study following germination

      Gonzalo Roqueiro, Fabio Causin, Carolina Olle-Resa, Horacio Maroder and Sara Maldonado

      Article first published online: 4 APR 2013 | DOI: 10.1111/ppl.12048

    14. Comparative analysis of peroxiredoxin activation in the brown macroalgae Scytosiphon gracilis and Lessonia nigrescens (Phaeophyceae) under copper stress

      Carlos Lovazzano, Carolina Serrano, Juan A. Correa and Loretto Contreras-Porcia

      Article first published online: 3 APR 2013 | DOI: 10.1111/ppl.12047

    15. Differential timing of defense-related responses induced by cerato-platanin and cerato-populin, two non-catalytic fungal elicitors

      Lara Lombardi, Franco Faoro, Simone Luti, Ivan Baccelli, Federica Martellini, Rodolfo Bernardi, Piero Picciarelli, Aniello Scala and Luigia Pazzagli

      Article first published online: 2 APR 2013 | DOI: 10.1111/ppl.12041

    16. Regulation of nitrate reduction in Arabidopsis WT and hxk1 mutant under C and N metabolites

      Małgorzata Reda

      Article first published online: 2 APR 2013 | DOI: 10.1111/ppl.12045

    17. Effect of growth temperature on the electron flow for photorespiration in leaves of tobacco grown in the field

      Wei Zhang, Wei Huang, Qiu-Yun Yang, Shi-Bao Zhang and Hong Hu

      Article first published online: 2 APR 2013 | DOI: 10.1111/ppl.12044

    18. A dual role for plant quinone reductases in host–fungus interaction

      Eiri Heyno, Noam Alkan and Robert Fluhr

      Article first published online: 2 APR 2013 | DOI: 10.1111/ppl.12042

    19. The role of anthocyanin in photoprotection and its relationship with the xanthophyll cycle and the antioxidant system in apple peel depends on the light conditions

      Changsheng Chen, Houhua Li, Di Zhang, Pengmin Li and Fengwang Ma

      Article first published online: 29 MAR 2013 | DOI: 10.1111/ppl.12043

    20. Transcript profiling of common bean nodules subjected to oxidative stress

      Mario Ramírez, Gabriel Guillén, Sara I. Fuentes, Luis P. Íñiguez, Rosaura Aparicio-Fabre, David Zamorano-Sánchez, Sergio Encarnación-Guevara, Dario Panzeri, Bianca Castiglioni, Paola Cremonesi, Francesco Strozzi, Alessandra Stella, Lourdes Girard, Francesca Sparvoli and Georgina Hernández

      Article first published online: 28 MAR 2013 | DOI: 10.1111/ppl.12040

    21. Calcium supply effects on wheat cultivars differing in salt resistance with special reference to leaf cytosol ion homeostasis

      Sherif H. Morgan, Sylvia Lindberg and Karl H. Mühling

      Article first published online: 28 MAR 2013 | DOI: 10.1111/ppl.12036

    22. Functional characterization of CitrusmacrophyllaBOR1 as a boron transporter

      Paola Cañon, Felipe Aquea, Amparo Rodríguez-Hoces de la Guardia and Patricio Arce-Johnson

      Article first published online: 25 MAR 2013 | DOI: 10.1111/ppl.12037

    23. Whole-plant and organ-level nitrogen isotope discrimination indicates modification of partitioning of assimilation, fluxes and allocation of nitrogen in knockout lines of Arabidopsis thaliana

      Lee A. Kalcsits and Robert D. Guy

      Article first published online: 25 MAR 2013 | DOI: 10.1111/ppl.12038

    24. The effect of carbohydrates and osmoticum on storage reserve accumulation and germination of Norway spruce somatic embryos

      Edward Businge, Joakim Bygdell, Gunnar Wingsle, Thomas Moritz and Ulrika Egertsdotter

      Article first published online: 25 MAR 2013 | DOI: 10.1111/ppl.12039

    25. Carbon transitions from either Calvin cycle or transitory starch to heteroglycans as revealed by 14C-labeling experiments using protoplasts from Arabidopsis

      Irina Malinova, Martin Steup and Joerg Fettke

      Article first published online: 25 MAR 2013 | DOI: 10.1111/ppl.12033

    26. Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening

      Song Luhua, Alicia Hegie, Nobuhiro Suzuki, Elena Shulaev, Xiaozhong Luo, Diana Cenariu, Vincent Ma, Stephanie Kao, Jennie Lim, Meryem Betul Gunay, Teruko Oosumi, Seung Cho Lee, Jeffery Harper, John Cushman, Martin Gollery, Thomas Girke, Julia Bailey-Serres, Rebecca A. Stevenson, Jian-Kang Zhu and Ron Mittler

      Article first published online: 20 MAR 2013 | DOI: 10.1111/ppl.12013

    27. Metabolism in orange fruits is driven by photooxidative stress in the leaves

      Florine Poiroux-Gonord, Jérémie Santini, Anne-Laure Fanciullino, Félicie Lopez-Lauri, Jean Giannettini, Huguette Sallanon, Liliane Berti and Laurent Urban

      Article first published online: 19 MAR 2013 | DOI: 10.1111/ppl.12023

    28. Fruit cuticle lipid composition and water loss in a diverse collection of pepper (Capsicum)

      Eugene P. Parsons, Sigal Popopvsky, Gregory T. Lohrey, Sharon Alkalai-Tuvia, Yaacov Perzelan, Paul Bosland, Penelope J. Bebeli, Ilan Paran, Elazar Fallik and Matthew A. Jenks

      Article first published online: 17 MAR 2013 | DOI: 10.1111/ppl.12035

    29. The interplay between P uptake pathways in mycorrhizal peas: a combined physiological and gene-silencing approach

      Mette Grønlund, Merete Albrechtsen, I. Elisabeth Johansen, Edith C. Hammer, Tom H. Nielsen and Iver Jakobsen

      Article first published online: 15 MAR 2013 | DOI: 10.1111/ppl.12030

    30. Nitric oxide mediates cold- and dehydration-induced expression of a novel MfHyPRP that confers tolerance to abiotic stress

      Jiali Tan, Chunliu Zhuo and Zhenfei Guo

      Article first published online: 15 MAR 2013 | DOI: 10.1111/ppl.12032

    31. Tolerance of submerged germinating rice to 50–200 mM NaCl in aerated solution

      Budiastuti Kurniasih, Hank Greenway and Timothy David Colmer

      Article first published online: 15 MAR 2013 | DOI: 10.1111/ppl.12029

    32. NbPHAN, a MYB transcriptional factor, regulates leaf development and affects drought tolerance in Nicotiana benthamiana

      Changjun Huang, Gaojie Hu, Fangfang Li, Yunqin Li, Jianxiang Wu and Xueping Zhou

      Article first published online: 15 MAR 2013 | DOI: 10.1111/ppl.12031

    33. Cu2+ inhibition of gel secretion in the xylem and its potential implications for water uptake of cut Acacia holosericea stems

      Kamani Ratnayake, Daryl C. Joyce and Richard I. Webb

      Article first published online: 23 FEB 2013 | DOI: 10.1111/ppl.12028

    34. Characterization of histidine-aspartate kinase HK1 and identification of histidine phosphotransfer proteins as potential partners in a Populus multistep phosphorelay

      François Héricourt, Françoise Chefdor, Lucie Bertheau, Mirai Tanigawa, Tatsuya Maeda, Grégory Guirimand, Vincent Courdavault, Mélanie Larcher, Christiane Depierreux, Hélène Bénédetti, Domenico Morabito, Franck Brignolas and Sabine Carpin

      Article first published online: 23 FEB 2013 | DOI: 10.1111/ppl.12024

    35. Adjustments in epidermal UV-transmittance of leaves in sun-shade transitions

      Paul W. Barnes, Anna R. Kersting, Stephan D. Flint, Wolfram Beyschlag and Ronald J. Ryel

      Article first published online: 20 FEB 2013 | DOI: 10.1111/ppl.12025

    36. Differential expression of calcium/calmodulin-regulated SlSRs in response to abiotic and biotic stresses in tomato fruit

      Tianbao Yang, Hui Peng, Bruce D. Whitaker and Wayne M. Jurick

      Article first published online: 19 FEB 2013 | DOI: 10.1111/ppl.12027

    37. Effects of pulses of elevated carbon dioxide concentration on stomatal conductance and photosynthesis in wheat and rice

      James A. Bunce

      Article first published online: 19 FEB 2013 | DOI: 10.1111/ppl.12026

    38. A cold responsive galactinol synthase gene from Medicago falcata (MfGolS1) is induced by myo-inositol and confers multiple tolerances to abiotic stresses

      Chunliu Zhuo, Ting Wang, Shaoyun Lu, Yaqing Zhao, Xiaoguang Li and Zhenfei Guo

      Article first published online: 28 JAN 2013 | DOI: 10.1111/ppl.12019

    39. Structure-function relationships during transgenic telomerase expression in Arabidopsis

      Dagmar Zachová, Miloslava Fojtová, Martina Dvořáčková, Iva Mozgová, Inna Lermontova, Vratislav Peška, Ingo Schubert, Jiří Fajkus and Eva Sýkorová

      Article first published online: 24 JAN 2013 | DOI: 10.1111/ppl.12021

    40. Commensalism in an agroecosystem: hydraulic redistribution by deep-rooted legumes improves survival of a droughted shallow-rooted legume companion

      Jiayin Pang, Yanmei Wang, Hans Lambers, Hans Lambers, Mark Tibbett, Kadambot H. M. Siddique and Megan H. Ryan

      Article first published online: 18 JAN 2013 | DOI: 10.1111/ppl.12020

    41. Conserved metabolic steps for sporopollenin precursor formation in tobacco and rice

      Yanbing Wang, Ying-Chen Lin, Joan So, Yegang Du and Clive Lo

      Article first published online: 7 JAN 2013 | DOI: 10.1111/ppl.12018

    42. Photosynthetic response of sweet sorghum to drought and re-watering at different growth stages

      Walter Zegada-Lizarazu and Andrea Monti

      Article first published online: 28 DEC 2012 | DOI: 10.1111/ppl.12016

    43. Localization of reactive oxygen species and change of antioxidant capacities in mesophyll and bundle sheath chloroplasts of maize under salinity

      Eiji Omoto, Haruto Nagao, Mitsutaka Taniguchi and Hiroshi Miyake

      Article first published online: 28 DEC 2012 | DOI: 10.1111/ppl.12017

  4. TECHNICAL FOCUS

    1. Genomic DNA-based absolute quantification of gene expression in Vitis

      Gregory A. Gambetta, Andrew J. McElrone and Mark A. Matthews

      Article first published online: 28 DEC 2012 | DOI: 10.1111/ppl.12014

  5. Original Articles

    1. The 5-methyl-deoxy-cytidine (5mdC) localization to reveal in situ the dynamics of DNA methylation chromatin pattern in a variety of plant organ and tissue cells during development

      Pilar S. Testillano, María-Teresa Solís and María C. Risueño

      Article first published online: 21 DEC 2012 | DOI: 10.1111/ppl.12015

    2. Arabidopsis thaliana organellar DNA polymerase IB mutants exhibit reduced mtDNA levels with a decrease in mitochondrial area density

      John D. Cupp and Brent L. Nielsen

      Article first published online: 13 DEC 2012 | DOI: 10.1111/ppl.12009

    3. UV-B impairs growth and gas exchange in grapevines grown in high altitude

      Federico J. Berli, Rodrigo Alonso, Ricardo Bressan-Smith and Rubén Bottini

      Article first published online: 13 DEC 2012 | DOI: 10.1111/ppl.12012

    4. Physiological and biochemical abilities of robusta coffee leaves for acclimation to cope with temporal changes in light availability

      Nelson F. Rodríguez-López, Paulo C. Cavatte, Paulo E. M. Silva, Samuel C. V. Martins, Leandro E. Morais, Eduardo F. Medina and Fábio M. DaMatta

      Article first published online: 13 DEC 2012 | DOI: 10.1111/ppl.12010

    5. Simultaneous measurements of H+ and O2 fluxes in Zostera marina and its physiological implications

      A-Peng Lin, Guang-Ce Wang and Wen-Qin Zhou

      Article first published online: 12 DEC 2012 | DOI: 10.1111/ppl.12008

    6. Association of specific pectin methylesterases with Al-induced root elongation inhibition in rice

      Xiao Ying Yang, Zhang Hui Zeng, Jing Ying Yan, Wei Fan, Hong Wu Bian, Mu Yuan Zhu, Jian Li Yang and Shao Jian Zheng

      Article first published online: 12 DEC 2012 | DOI: 10.1111/ppl.12005

    7. The reflectivity in the S-band and the broadband ultrasonic spectroscopy as new tools for the study of water relations in Vitis vinifera L.

      Domingo Sancho-Knapik, José Javier Peguero-Pina, Hipólito Medrano, María Dolores Fariñas, Tomás Gómez Álvarez-Arenas and Eustaquio Gil-Pelegrín

      Article first published online: 7 DEC 2012 | DOI: 10.1111/ppl.12007

    8. Leaf senescence in rice due to magnesium deficiency mediated defect in transpiration rate before sugar accumulation and chlorosis

      Natsuko I. Kobayashi, Takayuki Saito, Naoko Iwata, Yoshimi Ohmae, Ren Iwata, Keitaro Tanoi and Tomoko M. Nakanishi

      Article first published online: 24 NOV 2012 | DOI: 10.1111/ppl.12003

    9. Screening of UV-B-induced genes from apple peels by SSH: possible involvement of MdCOP1-mediated signaling cascade genes in anthocyanin accumulation

      Ting Peng, Takanori Saito, Chikako Honda, Yusuke Ban, Satoru Kondo, Ji-Hong Liu, Yoshimichi Hatsuyama and Takaya Moriguchi

      Article first published online: 21 NOV 2012 | DOI: 10.1111/ppl.12002

    10. Bimolecular fluorescence complementation and interaction of various Arabidopsis major intrinsic proteins expressed in yeast

      Emiko Murozuka, Susanne Hanisch, Thomas Günther Pomorski, Thomas Paul Jahn and Jan K. Schjoerring

      Article first published online: 20 NOV 2012 | DOI: 10.1111/ppl.12000

    11. UV-irradiation provokes generation of superoxide on cell wall polygalacturonic acid

      Jelena Bogdanović Pristov, Sonja Veljović Jovanović, Aleksandra Mitrović and Ivan Spasojević

      Article first published online: 20 NOV 2012 | DOI: 10.1111/ppl.12001

    12. Nitrate-induced early transcriptional changes during imbibition in non-after-ripened Sisymbrium officinale seeds

      Nestor Carrillo-Barral, Angel J. Matilla, Raquel Iglesias-Fernández and María del Carmen Rodríguez-Gacio

      Article first published online: 20 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01720.x

    13. TAC7, an essential component of the plastid transcriptionally active chromosome complex, interacts with FLN1, TAC10, TAC12 and TAC14 to regulate chloroplast gene expression in Arabidopsis thaliana

      Qing-Bo Yu, Yang Lu, Qian Ma, Tuan-Tuan Zhao, Chao Huang, Hui-Fang Zhao, Xiao-Lei Zhang, Ruo-Hong Lv and Zhong-Nan Yang

      Article first published online: 20 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01718.x

    14. Root-derived auxin contributes to the phosphorus-deficiency-induced cluster-root formation in white lupin (Lupinus albus)

      Zhi Bin Meng, Xue Di You, Dong Suo, Yun Long Chen, Caixian Tang, Jian Li Yang and Shao Jian Zheng

      Article first published online: 20 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01715.x

    15. Deep sequencing discovery of novel and conserved microRNAs in strawberry (Fragaria×ananassa)

      Anjing Ge, Lingfei Shangguan, Xi Zhang, Qinghua Dong, Jian Han, Hong Liu, Xicheng Wang and Jinggui Fang

      Article first published online: 20 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01713.x

    16. In vitro auxin treatment promotes cell division and delays endoreduplication in developing seeds of the model legume species Medicago truncatula

      Rana M. Atif, Florian Boulisset, Catherine Conreux, Richard Thompson and Sergio J. Ochatt

      Article first published online: 20 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01719.x

    17. Expression profiles of aquaporin homologues and petal movement during petal development in Tulipagesneriana

      Abul Kalam Azad, Ryosuke Hanawa, Takahiro Ishikawa, Yoshihiro Sawa and Hitoshi Shibata

      Article first published online: 20 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01717.x

    18. Apoplastic infusion of sucrose into stem internodes during female flowering does not increase grain yield in maize plants grown under nitrogen-limiting conditions

      Yunfeng Peng, Chunjian Li and Felix B. Fritschi

      Article first published online: 9 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01711.x

    19. Changes in the C/N balance caused by increasing external ammonium concentrations are driven by carbon and energy availabilities during ammonium nutrition in pea plants: the key roles of asparagine synthetase and anaplerotic enzymes

      Idoia Ariz, Aaron C. Asensio, Angel M. Zamarreño, Jose M. García-Mina, Pedro M. Aparicio-Tejo and Jose F. Moran

      Article first published online: 9 NOV 2012 | DOI: 10.1111/j.1399-3054.2012.01712.x

    20. Proteomic analysis of S-nitrosylated proteins in potato plant

      Hiroaki Kato, Daigo Takemoto and Kazuhito Kawakita

      Article first published online: 17 SEP 2012 | DOI: 10.1111/j.1399-3054.2012.01684.x

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