Environmental Microbiology

Cover image for Vol. 18 Issue 9

Early View (Online Version of Record published before inclusion in an issue)

Edited By: Kenneth N. Timmis, Martin Polz, Paola Bonfante, Rachel Whitaker, Thomas K.Wood, Jay Lennon, Volker Müller, Frank Stewart, Julie Huber, Juan L. Ramos and Alyson Santoro. Genomics Update Editor: Michael Galperin

Impact Factor: 5.932

ISI Journal Citation Reports © Ranking: 2015: 16/123 (Microbiology)

Online ISSN: 1462-2920

Associated Title(s): Environmental Microbiology Reports

VIEW

  1. 1 - 100
  2. 101 - 153
  1. EMI - Research article

    1. Fungal community composition in soils subjected to long-term chemical fertilization is most influenced by the type of organic matter

      Ruibo Sun, Melissa Dsouza, Jack A. Gilbert, Xisheng Guo, Daozhong Wang, Zhibin Guo, Yingying Ni and Haiyan Chu

      Version of Record online: 23 SEP 2016 | DOI: 10.1111/1462-2920.13512

    2. Dense water plumes modulate richness and productivity of deep sea microbes

      Gian Marco Luna, Jacopo Chiggiato, Grazia Marina Quero, Katrin Schroeder, Lucia Bongiorni, Dimitri Kalenitchenko and Pierre E. Galand

      Version of Record online: 23 SEP 2016 | DOI: 10.1111/1462-2920.13510

  2. Highlight

    1. Old and new symbiotic partners in lachnine aphids

      Nancy A. Moran

      Version of Record online: 21 SEP 2016 | DOI: 10.1111/1462-2920.13516

  3. EMI - Research Articles

  4. EMI - Research articles

    1. Hydrogen-rich water regulates effects of ROS balance on morphology, growth and secondary metabolism via glutathione peroxidase in Ganoderma lucidum

      Ang Ren, Rui Liu, Zhi-Gang Miao, Xue Zhang, Peng-Fei Cao, Tian-Xi Chen, Chen-Yang Li, Liang Shi, Ai-Liang Jiang and Ming-Wen Zhao

      Version of Record online: 9 SEP 2016 | DOI: 10.1111/1462-2920.13498

  5. EMI - Research Articles

    1. Pseudomonas syringae Differentiates into Phenotypically Distinct Subpopulations During Colonization of a Plant Host

      José S. Rufián, María-Antonia Sánchez-Romero, Diego López-Márquez, Alberto P. Macho, John W. Mansfield, Dawn L. Arnold, Javier Ruiz-Albert, Josep Casadesús and Carmen R. Beuzón

      Version of Record online: 9 SEP 2016 | DOI: 10.1111/1462-2920.13497

  6. EMI - Research articles

    1. You have full text access to this OnlineOpen article
      New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase

      Bram Vekeman, Frederiek-Maarten Kerckhof, Geert Cremers, Paul de Vos, Peter Vandamme, Nico Boon, Huub J.M. Op den Camp and Kim Heylen

      Version of Record online: 9 SEP 2016 | DOI: 10.1111/1462-2920.13485

  7. EMI - Research Articles

    1. Lysozyme activity of the Ruminococcus champanellensis cellulosome

      Sarah Moraïs, Darrell W. Cockburn, Yonit Ben-David, Nicole M. Koropatkin, Eric C. Martens, Sylvia H. Duncan, Harry J. Flint, Itzhak Mizrahi and Edward A. Bayer

      Version of Record online: 7 SEP 2016 | DOI: 10.1111/1462-2920.13501

    2. Photorhabdus-nematode symbiosis is dependent on hfq-mediated regulation of secondary metabolites

      Nicholas J. Tobias, Antje K. Heinrich, Helena Eresmann, Patrick R. Wright, Nick Neubacher, Rolf Backofen and Helge B. Bode

      Version of Record online: 7 SEP 2016 | DOI: 10.1111/1462-2920.13502

    3. Dissection of the HOG pathway activated by hydrogen peroxide in Saccharomyces cerevisiae

      Young Mi Lee, Eunjung Kim, Jieun An, Yeji Lee, Eunyong Choi, Wonja Choi, Eunpyo Moon and Wankee Kim

      Version of Record online: 7 SEP 2016 | DOI: 10.1111/1462-2920.13499

  8. EMI - Research article

    1. Meltwater export of prokaryotic cells from the Greenland ice sheet

      Karen A. Cameron, Marek Stibal, Jon R. Hawkings, Andreas B. Mikkelsen, Jon Telling, Tyler J. Kohler, Erkin Gözdereliler, Jakub D. Zarsky, Jemma L. Wadham and Carsten S. Jacobsen

      Version of Record online: 30 AUG 2016 | DOI: 10.1111/1462-2920.13483

    2. You have full text access to this OnlineOpen article
      Linking microbial diversity and functionality of arctic glacial surface habitats

      Stefanie Lutz, Alexandre M. Anesio, Arwyn Edwards and Liane G. Benning

      Version of Record online: 30 AUG 2016 | DOI: 10.1111/1462-2920.13494

    3. The ICEXTD of Azoarcus sp. CIB, an integrative and conjugative element with aerobic and anaerobic catabolic properties

      María Teresa Zamarro, Zaira Martín-Moldes and Eduardo Díaz

      Version of Record online: 30 AUG 2016 | DOI: 10.1111/1462-2920.13465

  9. EMI - Research Articles

    1. You have full text access to this OnlineOpen article
      A low frequency persistent reservoir of a genomic island in a pathogen population ensures island survival and improves pathogen fitness in a susceptible host

      Helen C. Neale, Robert Laister, Joseph Payne, Gail Preston, Robert W. Jackson and Dawn L. Arnold

      Version of Record online: 26 AUG 2016 | DOI: 10.1111/1462-2920.13482

  10. Highlight

    1. Rhizobia: tractable models for bacterial evolutionary ecology

      Katy D. Heath and Michael A. Grillo

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13492

  11. EMI - Research article

    1. Analysis of Gambierdiscus transcriptome data supports ancient origins of mixotrophic pathways in dinoflagellates

      Dana C. Price, Natalie Farinholt, Colin Gates, Alexander Shumaker, Nicole E. Wagner, Paul Bienfang and Debashish Bhattacharya

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13478

  12. Highlight

  13. EMI - Research article

    1. Toxin-Antitoxin systems eliminate defective cells and preserve symmetry in Bacillus subtilis biofilms

      Zohar Bloom-Ackermann, Nitai Steinberg, Gili Rosenberg, Yaara Oppenheimer-Shaanan, Dan Pollack, Shir Ely, Nimrod Storzi, Asaf Levy and Ilana Kolodkin-Gal

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13471

    2. You have full text access to this OnlineOpen article
      Bipartite graph analyses reveal interdomain LGT involving ultrasmall prokaryotes and their divergent, membrane-related proteins

      Alexander L. Jaffe, Eduardo Corel, Jananan Sylvestre Pathmanathan, Philippe Lopez and Eric Bapteste

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13477

    3. Enhanced viral activity and dark CO2 fixation rates under oxygen depletion: the case study of the marine Lake Rogoznica

      Eugenio Rastelli, Cinzia Corinaldesi, Bruna Petani, Antonio Dell'Anno, Irena Ciglenečki and Roberto Danovaro

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13484

    4. Structure and function of methanogenic microbial communities in sediments of Amazonian lakes with different water types

      Yang Ji, Roey Angel, Melanie Klose, Peter Claus, Humberto Marotta, Luana Pinho, Alex Enrich-Prast and Ralf Conrad

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13491

  14. EMI - Research Articles

    1. Desulfovibrio vulgaris CbiKP cobaltochelatase: evolution of a haem binding protein orchestrated by the incorporation of two histidine residues

      Susana A.L. Lobo, Marco A.M. Videira, Isabel Pacheco, Mark N. Wass, Martin J. Warren, Miguel Teixeira, Pedro M. Matias, Célia V. Romão and Lígia M. Saraiva

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13479

  15. EMI - Minireview

    1. You have free access to this content
      Glycerol metabolism in hypersaline environments

      Aharon Oren

      Version of Record online: 25 AUG 2016 | DOI: 10.1111/1462-2920.13493

  16. EMI - Research article

    1. Identification of an iron permease, cFTR1, in cyanobacteria involved in the iron reduction/re-oxidation uptake pathway

      Ning Xu, Guo-Wei Qiu, Wen-Jing Lou, Zheng-Ke Li, Hai-Bo Jiang, Neil M. Price and Bao-Sheng Qiu

      Version of Record online: 24 AUG 2016 | DOI: 10.1111/1462-2920.13464

    2. You have full text access to this OnlineOpen article
      Pediatric obesity is associated with an altered gut microbiota and discordant shifts in Firmicutes populations

      Alessandra Riva, Francesca Borgo, Carlotta Lassandro, Elvira Verduci, Giulia Morace, Elisa Borghi and David Berry

      Version of Record online: 22 AUG 2016 | DOI: 10.1111/1462-2920.13463

    3. High turnover rates of aerobic anoxygenic phototrophs in European freshwater lakes

      Zuzana Cepáková, Pavel Hrouzek, Eva Žišková, Ekaterina Nuyanzina-Boldareva, Michal Šorf, Eliška Kozlíková-Zapomělová, Ivette Salka, Hans-Peter Grossart and Michal Koblížek

      Version of Record online: 22 AUG 2016 | DOI: 10.1111/1462-2920.13475

    4. What distinguishes cyanobacteria able to revive after desiccation from those that cannot: the genome aspect

      Omer Murik, Nadav Oren, Yoram Shotland, Hagai Raanan, Haim Treves, Isaac Kedem, Nir Keren, Martin Hagemann, Nadin Pade and Aaron Kaplan

      Version of Record online: 22 AUG 2016 | DOI: 10.1111/1462-2920.13486

  17. EMI - Minireview

  18. EMI - Research article

    1. Comparative metagenomics unveils functions and genome features of microbialite-associated communities along a depth gradient

      Aurélien Saghaï, Yvan Zivanovic, David Moreira, Karim Benzerara, Paola Bertolino, Marie Ragon, Rosaluz Tavera, Ana Isabel López-Archilla and Purificación López-García

      Version of Record online: 19 AUG 2016 | DOI: 10.1111/1462-2920.13456

    2. You have full text access to this OnlineOpen article
      Soil compartment is a major determinant of the impact of simulated rainfall on desert microbiota

      Shazia N. Aslam, Alex J. Dumbrell, Jamal S. Sabir, Mohammed H. Z. Mutwakil, Mohammed M. N. Baeshen, Salah E. M. Abo-Aba, Dave R. Clark, Steven A. Yates, Nabih A. Baeshen, Graham J. C. Underwood and Terry J. McGenity

      Version of Record online: 19 AUG 2016 | DOI: 10.1111/1462-2920.13474

    3. Feeding on compatible solutes: A substrate-induced pathway for uptake and catabolism of ectoines and its genetic control by EnuR

      Annina Schulz, Nadine Stöveken, Ina M. Binzen, Tamara Hoffmann, Johann Heider and Erhard Bremer

      Version of Record online: 18 AUG 2016 | DOI: 10.1111/1462-2920.13414

    4. You have full text access to this OnlineOpen article
      Oxidation of urea-derived nitrogen by thaumarchaeota-dominated marine nitrifying communities

      Bradley B. Tolar, Natalie J. Wallsgrove, Brian N. Popp and James T. Hollibaugh

      Version of Record online: 11 AUG 2016 | DOI: 10.1111/1462-2920.13457

    5. Stoichiometric modelling of assimilatory and dissimilatory biomass utilisation in a microbial community

      Kristopher A. Hunt, Ryan deM. Jennings, William P. Inskeep and Ross P. Carlson

      Version of Record online: 11 AUG 2016 | DOI: 10.1111/1462-2920.13444

  19. EMI - Research Articles

    1. Calmodulin-mediated suppression of 2-ketoisovalerate reductase in Beauveria bassiana beauvericin biosynthetic pathway

      Jiyoung Kim, Deok-Hyo Yoon, Junsang Oh, Min-Woo Hyun, Jae-Gu Han and Gi-Ho Sung

      Version of Record online: 9 AUG 2016 | DOI: 10.1111/1462-2920.13461

    2. YsbA and LytST are essential for pyruvate utilization in Bacillus subtilis

      Marielle H. van den Esker, Ákos T. Kovács and Oscar P. Kuipers

      Version of Record online: 9 AUG 2016 | DOI: 10.1111/1462-2920.13454

    3. You have full text access to this OnlineOpen article
      Nomadic lifestyle of Lactobacillus plantarum revealed by comparative genomics of 54 strains isolated from different habitats

      Maria Elena Martino, Jumamurat R. Bayjanov, Brian E. Caffrey, Michiel Wels, Pauline Joncour, Sandrine Hughes, Benjamin Gillet, Michiel Kleerebezem, Sacha A.F.T. van Hijum and François Leulier

      Version of Record online: 4 AUG 2016 | DOI: 10.1111/1462-2920.13455

  20. Highlight

  21. EMI - Research article

    1. Extracellular DNases of Ralstonia solanacearum modulate biofilms and facilitate bacterial wilt virulence

      Tuan Minh Tran, April MacIntyre, Devanshi Khokhani, Martha Hawes and Caitilyn Allen

      Version of Record online: 2 AUG 2016 | DOI: 10.1111/1462-2920.13446

  22. EMI - Research Articles

    1. An extracellular Zn-only superoxide dismutase from Puccinia striiformis confers enhanced resistance to host-derived oxidative stress

      Jie Liu, Tao Guan, Peijing Zheng, Liyang Chen, Yang Yang, Baoyu Huai, Dan Li, Qing Chang, Lili Huang and Zhensheng Kang

      Version of Record online: 1 AUG 2016 | DOI: 10.1111/1462-2920.13451

  23. EMI - Research article

    1. Evidence of a bacterial core in the stored products pest Plodia interpunctella: the influence of different diets

      Matteo Montagna, Valeria Mereghetti, Giorgio Gargari, Simone Guglielmetti, Franco Faoro, Giuseppe Lozzia, Daria Locatelli and Lidia Limonta

      Version of Record online: 1 AUG 2016 | DOI: 10.1111/1462-2920.13450

  24. Highlight

  25. EMI - Research article

    1. Effector profiles distinguish formae speciales of Fusarium oxysporum

      Peter van Dam, Like Fokkens, Sarah M. Schmidt, Jasper H.J. Linmans, H. Corby Kistler, Li-Jun Ma and Martijn Rep

      Version of Record online: 29 JUL 2016 | DOI: 10.1111/1462-2920.13445

    2. You have full text access to this OnlineOpen article
      Nanosilver inhibits nitrification and reduces ammonia-oxidising bacterial but not archaeal amoA gene abundance in estuarine sediments

      Jessica Beddow, Björn Stolpe, Paula A. Cole, Jamie R. Lead, Melanie Sapp, Brett P. Lyons, Ian Colbeck and Corinne Whitby

      Version of Record online: 29 JUL 2016 | DOI: 10.1111/1462-2920.13441

    3. Spatial and temporal variability of aerobic anoxygenic photoheterotrophic bacteria along the east coast of Australia

      Jaime Bibiloni-Isaksson, Justin R. Seymour, Tim Ingleton, Jodie van de Kamp, Levente Bodrossy and Mark V. Brown

      Version of Record online: 29 JUL 2016 | DOI: 10.1111/1462-2920.13436

  26. EMI - Research Articles

    1. Iron and Fur in the life cycle of the zoonotic pathogen Vibrio vulnificus

      David Pajuelo, Carla Hernández-Cabanyero, Eva Sanjuan, Chung-Te Lee, Francisco Xavier Silva-Hernández, Lien-I Hor, Simon MacKenzie and Carmen Amaro

      Version of Record online: 25 JUL 2016 | DOI: 10.1111/1462-2920.13424

  27. EMI - Research article

    1. Pyridine nucleotide transhydrogenases enable redox balance of Pseudomonas putida during biodegradation of aromatic compounds

      Pablo I. Nikel, Danilo Pérez-Pantoja and Víctor de Lorenzo

      Version of Record online: 24 JUL 2016 | DOI: 10.1111/1462-2920.13434

    2. Unravelling post-transcriptional PrmC-dependent regulatory mechanisms in Pseudomonas aeruginosa

      Jonas Krueger, Sarah Pohl, Matthias Preusse, Adrian Kordes, Nils Rugen, Monika Schniederjans, Andreas Pich and Susanne Häussler

      Version of Record online: 24 JUL 2016 | DOI: 10.1111/1462-2920.13435

    3. Energetic costs of plasmids assessed by quantitative physiological analyses

      Kathleen Trautwein, Sabine Eva Will, Reiner Hulsch, Uwe Maschmann, Katharina Wiegmann, Michael Hensler, Victoria Michael, Hanna Ruppersberg, Daniel Wünsch, Christoph Feenders, Meina Neumann-Schaal, Sabine Kaltenhäuser, Marcus Ulbrich, Kerstin Schmidt-Hohagen, Bernd Blasius, Jörn Petersen, Dietmar Schomburg and Ralf Rabus

      Version of Record online: 24 JUL 2016 | DOI: 10.1111/1462-2920.13381

  28. EMI - Research Articles

    1. Metagenomics unveils the attributes of the alginolytic guilds of sediments from four distant cold coastal environments

      Marina N. Matos, Mariana Lozada, Luciano E. Anselmino, Matías A. Musumeci, Bernard Henrissat, Janet K. Jansson, Walter P. Mac Cormack, JoLynn Carroll, Sara Sjöling, Leif Lundgren and Hebe M. Dionisi

      Version of Record online: 18 JUL 2016 | DOI: 10.1111/1462-2920.13433

    2. Polysaccharide utilisation loci of Bacteroidetes from two contrasting open ocean sites in the North Atlantic

      Christin M. Bennke, Karen Krüger, Lennart Kappelmann, Sixing Huang, Angélique Gobet, Margarete Schüler, Valérie Barbe, Bernhard M. Fuchs, Gurvan Michel, Hanno Teeling and Rudolf I. Amann

      Version of Record online: 18 JUL 2016 | DOI: 10.1111/1462-2920.13429

    3. Direct-geneFISH: a simplified protocol for the simultaneous detection and quantification of genes and rRNA in microorganisms

      Jimena Barrero-Canosa, Cristina Moraru, Laura Zeugner, Bernhard M. Fuchs and Rudolf Amann

      Version of Record online: 18 JUL 2016 | DOI: 10.1111/1462-2920.13432

  29. EMI - Research Article

    1. Knock-down of the methyltransferase Kmt6 relieves H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi

      Lena Studt, Sarah M. Rösler, Immo Burkhardt, Birgit Arndt, Michael Freitag, Hans-Ulrich Humpf, Jeroen S. Dickschat and Bettina Tudzynski

      Version of Record online: 18 JUL 2016 | DOI: 10.1111/1462-2920.13427

  30. EMI - Research Articles

    1. Mutation of the toxR or mshA genes from Vibrio coralliilyticus strain OCN014 reduces infection of the coral Acropora cytherea

      Blake Ushijima, Patrick Videau, Donna Poscablo, John W. Stengel, Silvia Beurmann, Andrew H. Burger, Greta S. Aeby and Sean M. Callahan

      Version of Record online: 18 JUL 2016 | DOI: 10.1111/1462-2920.13428

    2. Light governs asexual differentiation in the grey mould fungus Botrytis cinerea via the putative transcription factor BcLTF2

      Kim C. Cohrs, Adeline Simon, Muriel Viaud and Julia Schumacher

      Version of Record online: 18 JUL 2016 | DOI: 10.1111/1462-2920.13431

  31. EMI - Research article

    1. You have full text access to this OnlineOpen article
      Comparative genomic analysis of isoproturon-mineralizing sphingomonads reveals the isoproturon catabolic mechanism

      Xin Yan, Tao Gu, Zhongquan Yi, Junwei Huang, Xiaowei Liu, Ji Zhang, Xihui Xu, Zhihong Xin, Qing Hong, Jian He, Jim C. Spain, Shunpeng Li and Jiandong Jiang

      Version of Record online: 15 JUL 2016 | DOI: 10.1111/1462-2920.13413

  32. Research Articles

    1. Trichothecenes and aspinolides produced by Trichoderma arundinaceum regulate expression of Botrytis cinerea genes involved in virulence and growth

      Mónica G. Malmierca, Inmaculada Izquierdo-Bueno, Susan P. McCormick, Rosa E. Cardoza, Nancy J. Alexander, Javier Barua, Laura Lindo, Pedro A. Casquero, Isidro G. Collado, Enrique Monte and Santiago Gutiérrez

      Version of Record online: 15 JUL 2016 | DOI: 10.1111/1462-2920.13410

  33. EMI - Research article

    1. Expanded insecticide catabolic activity gained by a single nucleotide substitution in a bacterial carbamate hydrolase gene

      Başak Öztürk, Maarten Ghequire, Thi Phi Oanh Nguyen, René De Mot, Ruddy Wattiez and Dirk Springael

      Version of Record online: 15 JUL 2016 | DOI: 10.1111/1462-2920.13409

    2. Multiple opportunistic pathogens can cause a bleaching disease in the red seaweed Delisea pulchra

      Vipra Kumar, Enrique Zozaya-Valdes, Staffan Kjelleberg, Torsten Thomas and Suhelen Egan

      Version of Record online: 15 JUL 2016 | DOI: 10.1111/1462-2920.13403

    3. You have full text access to this OnlineOpen article
      Distribution and expression of microbial rhodopsins in the Baltic Sea and adjacent waters

      Björn Brindefalk, Martin Ekman, Karolina Ininbergs, Christopher L. Dupont, Shibu Yooseph, Jarone Pinhassi and Birgitta Bergman

      Version of Record online: 14 JUL 2016 | DOI: 10.1111/1462-2920.13407

  34. EMI - Research Articles

    1. Latitude delineates patterns of biogeography in terrestrial Streptomyces

      Mallory J. Choudoir, James R. Doroghazi and Daniel H. Buckley

      Version of Record online: 12 JUL 2016 | DOI: 10.1111/1462-2920.13420

    2. Conversion of the sensor kinase DcuS of Escherichia coli of the DcuB/DcuS sensor complex to the C4-dicarboxylate responsive form by the transporter DcuB

      Sebastian Wörner, Alexander Strecker, Christian Monzel, Matthias Zeltner, Julian Witan, Andrea Ebert-Jung and Gottfried Unden

      Version of Record online: 12 JUL 2016 | DOI: 10.1111/1462-2920.13418

  35. EMI - Research article

    1. Two distinct Ras genes from Puccinia striiformis exhibit differential roles in rust pathogenicity and cell death

      Yulin Cheng, Wumei Wang, Juanni Yao, Lili Huang, Ralf T. Voegele, Xiaojie Wang and Zhensheng Kang

      Version of Record online: 12 JUL 2016 | DOI: 10.1111/1462-2920.13379

    2. Field-based evidence for copper contamination induced changes of antibiotic resistance in agricultural soils

      Hang-Wei Hu, Jun-Tao Wang, Jing Li, Jun-Jian Li, Yi-Bing Ma, Deli Chen and Ji-Zheng He

      Version of Record online: 12 JUL 2016 | DOI: 10.1111/1462-2920.13370

    3. Species-sorting and mass-transfer paradigms control managed natural metacommunities

      Susanne Günther, Karoline Faust, Joachim Schumann, Hauke Harms, Jeroen Raes and Susann Müller

      Version of Record online: 8 JUL 2016 | DOI: 10.1111/1462-2920.13402

  36. EMI - Research Articles

    1. You have full text access to this OnlineOpen article
      Comparative genomic, proteomic and exoproteomic analyses of three Pseudomonas strains reveals novel insights into the phosphorus scavenging capabilities of soil bacteria

      Ian D. E. A. Lidbury, Andrew R. J. Murphy, David J. Scanlan, Gary D. Bending, Alexandra M. E. Jones, Jonathan D. Moore, Andrew Goodall, John P. Hammond and Elizabeth M. H. Wellington

      Version of Record online: 7 JUL 2016 | DOI: 10.1111/1462-2920.13390

  37. EMI - Research article

    1. Spatial distribution of aquatic marine fungi across the western Arctic and sub-arctic

      Brandon T. Hassett, Anne-Lise L Ducluzeau, Roy E. Collins and Rolf Gradinger

      Version of Record online: 7 JUL 2016 | DOI: 10.1111/1462-2920.13371

  38. EMI - Research Articles

    1. Phylogenomic analysis of lipid biosynthetic genes of Archaea shed light on the ‘lipid divide’

      Laura Villanueva, Stefan Schouten and Jaap S. Sinninghe Damsté

      Version of Record online: 7 JUL 2016 | DOI: 10.1111/1462-2920.13361

    2. Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO2 concentrations

      Alexander J. Probst, Cindy J. Castelle, Andrea Singh, Christopher T. Brown, Karthik Anantharaman, Itai Sharon, Laura A. Hug, David Burstein, Joanne B. Emerson, Brian C. Thomas and Jillian F. Banfield

      Version of Record online: 7 JUL 2016 | DOI: 10.1111/1462-2920.13362

  39. EMI - Research article

    1. You have full text access to this OnlineOpen article
    2. Microbial community diversity, structure and assembly across oxygen gradients in meromictic marine lakes, Palau

      Matthew S. Meyerhof, Jesse M. Wilson, Michael N. Dawson and J. Michael Beman

      Version of Record online: 4 JUL 2016 | DOI: 10.1111/1462-2920.13416

  40. EMI - Research Articles

    1. Phospholipid homeostasis maintains cell polarity, development and virulence in metarhizium robertsii

      Qiang Gao, Yuzhen Lu, Hongyan Yao, Yong-Jiang Xu, Wei Huang and Chengshu Wang

      Version of Record online: 30 JUN 2016 | DOI: 10.1111/1462-2920.13408

    2. Comparative activity and functional ecology of permafrost soils and lithic niches in a hyper-arid polar desert

      Jacqueline Goordial, Alfonso Davila, Charles W. Greer, Rebecca Cannam, Jocelyne DiRuggiero, Christopher P. McKay and Lyle G. Whyte

      Version of Record online: 28 JUN 2016 | DOI: 10.1111/1462-2920.13353

  41. EMI - Research article

    1. Physiological adjustments and transcriptome reprogramming are involved in the acclimation to salinity gradients in diatoms

      Adrien Bussard, Erwan Corre, Cédric Hubas, Evelyne Duvernois-Berthet, Gildas Le Corguillé, Laurent Jourdren, Fanny Coulpier, Pascal Claquin and Pascal Jean Lopez

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13398

    2. Large-scale maps of variable infection efficiencies in aquatic Bacteroidetes phage-host model systems

      Karin Holmfeldt, Natalie Solonenko, Cristina Howard-Varona, Mario Moreno, Rex R. Malmstrom, Matthew J. Blow and Matthew B. Sullivan

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13392

    3. Pigment variations in Emiliania huxleyi (CCMP370) as a response to changes in light intensity or quality

      José L. Garrido, Christophe Brunet and Francisco Rodríguez

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13373

  42. EMI - Research articles

    1. Organization and mode of action of two component system signaling circuits from the various kingdoms of life

      Adrian F. Alvarez, Carlos Barba-Ostria, Hortencia Silva-Jiménez and Dimitris Georgellis

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13397

  43. EMI - Research article

    1. Prediction of bacterial associations with plants using a supervised machine-learning approach

      Pedro Manuel Martínez-García, Emilia López-Solanilla, Cayo Ramos and Pablo Rodríguez-Palenzuela

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13389

    2. Culture-independent characterization of novel psychrophilic magnetotactic cocci from Antarctic marine sediments

      Fernanda Abreu, Ana Carolina, V. Araujo, Pedro Leão, Karen Tavares Silva, Fabíola Marques de Carvalho, Oberdan de Lima Cunha, Luiz Gonzaga Almeida, Corey Geurink, Marcos Farina, Daniel Rodelli, Luigi Jovane, Vivian H. Pellizari, Ana Tereza de Vasconcelos, Dennis A. Bazylinski and Ulysses Lins

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13388

    3. A transposon present in specific strains of Bacillus subtilis negatively affects nutrient- and dodecylamine-induced spore germination

      Antonina O. Krawczyk, Erwin M. Berendsen, Anne de Jong, Jos Boekhorst, Marjon H. J. Wells-Bennik, Oscar P. Kuipers and Robyn T. Eijlander

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13386

  44. EMI - Research articles

    1. A multiproxy approach to evaluate biocidal treatments on biodeteriorated majolica glazed tiles

      M. L. Coutinho, A. Z. Miller, P. M. Martin-Sanchez, J. Mirão, A. Gomez-Bolea, B. Machado-Moreira, L. Cerqueira-Alves, V. Jurado, C. Saiz-Jimenez, A. Lima, A. J. L. Phillips, F. Pina and M. F. Macedo

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13380

  45. EMI - Research article

    1. Major cereal crops benefit from biological nitrogen fixation when inoculated with the nitrogen-fixing bacterium Pseudomonas protegens Pf-5 X940

      Ana Romina Fox, Gabriela Soto, Claudio Valverde, Daniela Russo, Antonio Lagares Jr, Ángeles Zorreguieta, Karina Alleva, Cecilia Pascuan, Romina Frare, Jesús Mercado-Blanco, Ray Dixon and Nicolás Daniel Ayub

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13376

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      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13372

    3. Hydroxylations of trichothecene rings in the biosynthesis of Fusarium trichothecenes: evolution of alternative pathways in the nivalenol chemotype

      Kazuyuki Maeda, Akira Tanaka, Ryosuke Sugiura, Hiroyuki Koshino, Takeshi Tokai, Masayuki Sato, Yuichi Nakajima, Yoshikazu Tanahashi, Kyoko Kanamaru, Tetsuo Kobayashi, Takumi Nishiuchi, Makoto Fujimura, Naoko Takahashi-Ando and Makoto Kimura

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13338

    4. Insights into the biodiversity of the gut microbiota of broiler chickens

      Leonardo Mancabelli, Chiara Ferrario, Christian Milani, Marta Mangifesta, Francesca Turroni, Sabrina Duranti, Gabriele Andrea Lugli, Alice Viappiani, Maria Cristina Ossiprandi, Douwe van Sinderen and Marco Ventura

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13363

    5. A multiplayer game: species of Clostridium, Acinetobacter, and Pseudomonas are responsible for the persistence of antibiotic resistance genes in manure-treated soils

      Sebastien Olivier Leclercq, Chao Wang, Zhihai Sui, Hai Wu, Baoli Zhu, Ye Deng and Jie Feng

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13337

    6. The cyclochlorotine mycotoxin is produced by the nonribosomal peptide synthetase CctN in Talaromyces islandicus (‘Penicillium islandicum’)

      Thomas Schafhauser, Norbert Kirchner, Andreas Kulik, Mieke M.E. Huijbers, Liane Flor, Thibault Caradec, David P. Fewer, Harald Gross, Philippe Jacques, Linda Jahn, Jouni Jokela, Valérie Leclère, Jutta Ludwig-Müller, Kaarina Sivonen, Willem J.H. van Berkel, Tilmann Weber, Wolfgang Wohlleben and Karl-Heinz van Pée

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13294

  46. EMI - Research Articles

    1. Metabolome-mediated biocryomorphic evolution promotes carbon fixation in Greenlandic cryoconite holes

      Joseph M. Cook, Arwyn Edwards, Mark Bulling, Luis A. J. Mur, Sophie Cook, Jarishma K. Gokul, Karen A. Cameron, Michael Sweet and Tristram D. L. Irvine-Fynn

      Version of Record online: 23 JUN 2016 | DOI: 10.1111/1462-2920.13349

  47. EMI - Research article

    1. You have full text access to this OnlineOpen article
      Dealing with salinity extremes and nitrogen limitation – an unexpected strategy of the marine bacterium Dinoroseobacter shibae

      Sarah Kleist, Marcus Ulbrich, Nelli Bill, Kerstin Schmidt-Hohagen, Robert Geffers and Dietmar Schomburg

      Version of Record online: 15 JUN 2016 | DOI: 10.1111/1462-2920.13266

  48. EMI - Research Articles

    1. Rhizoxin analogs, orfamide A and chitinase production contribute to the toxicity of Pseudomonas protegens strain Pf-5 to Drosophila melanogaster

      Joyce E. Loper, Marcella D. Henkels, Lorena I. Rangel, Marika H. Olcott, Francesca L. Walker, Kise L. Bond, Teresa A. Kidarsa, Cedar N. Hesse, Baruch Sneh, Virginia O. Stockwell and Barbara J. Taylor

      Version of Record online: 15 JUN 2016 | DOI: 10.1111/1462-2920.13369

  49. EMI - Research article

    1. Genome-wide mapping of transcription start sites yields novel insights into the primary transcriptome of Pseudomonas putida

      Isotta D'Arrigo, Klara Bojanovič, Xiaochen Yang, Martin Holm Rau and Katherine S. Long

      Version of Record online: 15 JUN 2016 | DOI: 10.1111/1462-2920.13326

    2. You have full text access to this OnlineOpen article

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