Environmental Microbiology

Cover image for Vol. 18 Issue 6

Early View (Online Version of Record published before inclusion in an issue)

Edited By: Kenneth N. Timmis, Martin Polz, Paola Bonfante, Rachel Whitaker, Thomas K.Wood, Jay Lennon, Volker Müller, Frank Stewart, Julie Huber and Juan L. Ramos. Genomics Update Editor: Michael Galperin

Impact Factor: 5.932

ISI Journal Citation Reports © Ranking: 2015: 16/123 (Microbiology)

Online ISSN: 1462-2920

Associated Title(s): Environmental Microbiology Reports

VIEW

  1. 1 - 100
  2. 101 - 146
  1. EMI - Research Articles

    1. You have full text access to this OnlineOpen article
      A mechanism for bacterial transformation of dimethylsulfide to dimethylsulfoxide: a missing link in the marine organic sulfur cycle

      Ian Lidbury, Eileen Kröber, Zhidong Zhang, Yijun Zhu, J. Colin Murrell, Yin Chen and Hendrik Schäfer

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13354

  2. EMI - Research article

    1. Physiological adjustments and transcriptome reprogramming are involved in the acclimation to salinity gradients in diatoms

      Adrien Bussard, Erwan Corre, Cédric Hubas, Evelyne Duvernois-Berthet, Gildas Le Corguillé, Laurent Jourdren, Fanny Coulpier, Pascal Claquin and Pascal Jean Lopez

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13398

    2. Large-scale maps of variable infection efficiencies in aquatic Bacteroidetes phage-host model systems

      Karin Holmfeldt, Natalie Solonenko, Cristina Howard-Varona, Mario Moreno, Rex R. Malmstrom, Matthew J. Blow and Matthew B. Sullivan

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13392

    3. Pigment variations in Emiliania huxleyi (CCMP370) as a response to changes in light intensity or quality

      José L. Garrido, Christophe Brunet and Francisco Rodríguez

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13373

  3. EMI - Research articles

    1. Organization and mode of action of two component system signaling circuits from the various kingdoms of life

      Adrian F. Alvarez, Carlos Barba-Ostria, Hortencia Silva-Jiménez and Dimitris Georgellis

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13397

  4. EMI - Research article

    1. Prediction of bacterial associations with plants using a supervised machine-learning approach

      Pedro Manuel Martínez-García, Emilia López-Solanilla, Cayo Ramos and Pablo Rodríguez-Palenzuela

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13389

    2. Culture-independent characterization of novel psychrophilic magnetotactic cocci from Antarctic marine sediments

      Fernanda Abreu, Ana Carolina, V. Araujo, Pedro Leão, Karen Tavares Silva, Fabíola Marques de Carvalho, Oberdan de Lima Cunha, Luiz Gonzaga Almeida, Corey Geurink, Marcos Farina, Daniel Rodelli, Luigi Jovane, Vivian H. Pellizari, Ana Tereza de Vasconcelos, Dennis A. Bazylinski and Ulysses Lins

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13388

  5. EMI - Research articles

    1. Anaerobic microbial Fe(II) oxidation and Fe(III) reduction in coastal marine sediments controlled by organic carbon content

      Katja Laufer, James M. Byrne, Clemens Glombitza, Caroline Schmidt, Bo Barker Jørgensen and Andreas Kappler

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13387

  6. EMI - Research article

    1. A transposon present in specific strains of Bacillus subtilis negatively affects nutrient- and dodecylamine-induced spore germination

      Antonina O. Krawczyk, Erwin M. Berendsen, Anne de Jong, Jos Boekhorst, Marjon H. J. Wells-Bennik, Oscar P. Kuipers and Robyn T. Eijlander

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13386

    2. Microbial dinitrogen fixation in coral holobionts exposed to thermal stress and bleaching

      Ulisse Cardini, Nanne van Hoytema, Vanessa N. Bednarz, Laura Rix, Rachel A. Foster, Mamoon M. D. Al-Rshaidat and Christian Wild

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13385

  7. EMI - Research articles

    1. A multiproxy approach to evaluate biocidal treatments on biodeteriorated majolica glazed tiles

      M. L. Coutinho, A. Z. Miller, P. M. Martin-Sanchez, J. Mirão, A. Gomez-Bolea, B. Machado-Moreira, L. Cerqueira-Alves, V. Jurado, C. Saiz-Jimenez, A. Lima, A. J. L. Phillips, F. Pina and M. F. Macedo

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13380

  8. EMI - Research article

    1. Major cereal crops benefit from biological nitrogen fixation when inoculated with the nitrogen-fixing bacterium Pseudomonas protegens Pf-5 X940

      Ana Romina Fox, Gabriela Soto, Claudio Valverde, Daniela Russo, Antonio Lagares Jr, Ángeles Zorreguieta, Karina Alleva, Cecilia Pascuan, Romina Frare, Jesús Mercado-Blanco, Ray Dixon and Nicolás Daniel Ayub

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13376

    2. Methanogenic paraffin degradation proceeds via alkane addition to fumarate by ‘Smithella’ spp. mediated by a syntrophic coupling with hydrogenotrophic methanogens

      Boris Wawrik, Christopher R. Marks, Irene A. Davidova, Michael J. McInerney, Shane Pruitt, Kathleen E. Duncan, Joseph M. Suflita and Amy V. Callaghan

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13374

    3. Competitive advantage and higher fitness in native populations of genetically structured planktonic diatoms

      Sirje Sildever, Josefin Sefbom, Inga Lips and Anna Godhe

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13372

    4. Hydroxylations of trichothecene rings in the biosynthesis of Fusarium trichothecenes: evolution of alternative pathways in the nivalenol chemotype

      Kazuyuki Maeda, Akira Tanaka, Ryosuke Sugiura, Hiroyuki Koshino, Takeshi Tokai, Masayuki Sato, Yuichi Nakajima, Yoshikazu Tanahashi, Kyoko Kanamaru, Tetsuo Kobayashi, Takumi Nishiuchi, Makoto Fujimura, Naoko Takahashi-Ando and Makoto Kimura

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13338

    5. Insights into the biodiversity of the gut microbiota of broiler chickens

      Leonardo Mancabelli, Chiara Ferrario, Christian Milani, Marta Mangifesta, Francesca Turroni, Sabrina Duranti, Gabriele Andrea Lugli, Alice Viappiani, Maria Cristina Ossiprandi, Douwe van Sinderen and Marco Ventura

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13363

    6. Coexistence facilitates interspecific biofilm formation in complex microbial communities

      Jonas S. Madsen, Henriette L. Røder, Jakob Russel, Helle Sørensen, Mette Burmølle and Søren J. Sørensen

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13335

    7. A multiplayer game: species of Clostridium, Acinetobacter, and Pseudomonas are responsible for the persistence of antibiotic resistance genes in manure-treated soils

      Sebastien Olivier Leclercq, Chao Wang, Zhihai Sui, Hai Wu, Baoli Zhu, Ye Deng and Jie Feng

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13337

    8. The cyclochlorotine mycotoxin is produced by the nonribosomal peptide synthetase CctN in Talaromyces islandicus (‘Penicillium islandicum’)

      Thomas Schafhauser, Norbert Kirchner, Andreas Kulik, Mieke M.E. Huijbers, Liane Flor, Thibault Caradec, David P. Fewer, Harald Gross, Philippe Jacques, Linda Jahn, Jouni Jokela, Valérie Leclère, Jutta Ludwig-Müller, Kaarina Sivonen, Willem J.H. van Berkel, Tilmann Weber, Wolfgang Wohlleben and Karl-Heinz van Pée

      Version of Record online: 27 JUN 2016 | DOI: 10.1111/1462-2920.13294

  9. EMI - Research Articles

    1. Metabolome-mediated biocryomorphic evolution promotes carbon fixation in Greenlandic cryoconite holes

      Joseph M. Cook, Arwyn Edwards, Mark Bulling, Luis A. J. Mur, Sophie Cook, Jarishma K. Gokul, Karen A. Cameron, Michael Sweet and Tristram D. L. Irvine-Fynn

      Version of Record online: 23 JUN 2016 | DOI: 10.1111/1462-2920.13349

  10. EMI - Research article

    1. You have full text access to this OnlineOpen article
      Dealing with salinity extremes and nitrogen limitation – an unexpected strategy of the marine bacterium Dinoroseobacter shibae

      Sarah Kleist, Marcus Ulbrich, Nelli Bill, Kerstin Schmidt-Hohagen, Robert Geffers and Dietmar Schomburg

      Version of Record online: 15 JUN 2016 | DOI: 10.1111/1462-2920.13266

  11. EMI - Research Articles

    1. Rhizoxin analogs, orfamide A and chitinase production contribute to the toxicity of Pseudomonas protegens strain Pf-5 to Drosophila melanogaster

      Joyce E. Loper, Marcella D. Henkels, Lorena I. Rangel, Marika H. Olcott, Francesca L. Walker, Kise L. Bond, Teresa A. Kidarsa, Cedar N. Hesse, Baruch Sneh, Virginia O. Stockwell and Barbara J. Taylor

      Version of Record online: 15 JUN 2016 | DOI: 10.1111/1462-2920.13369

  12. EMI - Research article

    1. Genome-wide mapping of transcription start sites yields novel insights into the primary transcriptome of Pseudomonas putida

      Isotta D'Arrigo, Klara Bojanovič, Xiaochen Yang, Martin Holm Rau and Katherine S. Long

      Version of Record online: 15 JUN 2016 | DOI: 10.1111/1462-2920.13326

    2. You have full text access to this OnlineOpen article
    3. Type II NADH:quinone oxidoreductase family: phylogenetic distribution, structural diversity and evolutionary divergences

      Bruno C. Marreiros, Filipa V. Sena, Filipe M. Sousa, Ana P. Batista and Manuela M. Pereira

      Version of Record online: 9 JUN 2016 | DOI: 10.1111/1462-2920.13352

    4. Segregation of nod-containing and nod-deficient bradyrhizobia as endosymbionts of Arachis hypogaea and as endophytes of Oryza sativa in intercropped fields of Bengal Basin, India

      Sohini Guha, Monolina Sarkar, Pritha Ganguly, Md Raihan Uddin, Sukhendu Mandal and Maitrayee DasGupta

      Version of Record online: 9 JUN 2016 | DOI: 10.1111/1462-2920.13348

    5. Genome-wide identification and characterization of macrolide glycosyltransferases from a marine-derived Bacillus strain and their phylogenetic distribution

      Yang Liu, Wen Qin, Quanquan Liu, Jun Zhang, Huayue Li, Shanshan Xu, Pengfei Ren, Li Tian and Wenli Li

      Version of Record online: 8 JUN 2016 | DOI: 10.1111/1462-2920.13367

    6. You have full text access to this OnlineOpen article
      Comparative and transcriptional analysis of the predicted secretome in the lignocellulose-degrading basidiomycete fungus Pleurotus ostreatus

      Manuel Alfaro, Raúl Castanera, José L. Lavín, Igor V. Grigoriev, José A. Oguiza, Lucía Ramírez and Antonio G. Pisabarro

      Version of Record online: 8 JUN 2016 | DOI: 10.1111/1462-2920.13360

  13. EMI - Research Articles

    1. You have full text access to this OnlineOpen article
      Environmental filtering decreases with fish development for the assembly of gut microbiota

      Qingyun Yan, Jinjin Li, Yuhe Yu, Jianjun Wang, Zhili He, Joy D. Van Nostrand, Megan L. Kempher, Liyou Wu, Yaping Wang, Lanjie Liao, Xinghao Li, Shu Wu, Jiajia Ni, Chun Wang and Jizhong Zhou

      Version of Record online: 8 JUN 2016 | DOI: 10.1111/1462-2920.13365

    2. You have full text access to this OnlineOpen article
      Phosphate and ATP uptake by lake bacteria: does taxonomical identity matter?

      Carina Rofner, Ruben Sommaruga and María Teresa Pérez

      Version of Record online: 8 JUN 2016 | DOI: 10.1111/1462-2920.13368

    3. You have full text access to this OnlineOpen article
      Functional analysis of Agaricus bisporus serine proteinase 1 reveals roles in utilization of humic rich substrates and adaptation to the leaf-litter ecological niche

      Mary N. Heneghan, Claire Burns, Ana M. S. B. Costa, Kerry S. Burton, Michael P. Challen, Andy M. Bailey and Gary D. Foster

      Version of Record online: 7 JUN 2016 | DOI: 10.1111/1462-2920.13350

    4. Hydroxylamine-dependent anaerobic ammonium oxidation (anammox) by “Candidatus Brocadia sinica”

      Mamoru Oshiki, Muhammad Ali, Kaori Shinyako-Hata, Hisashi Satoh and Satoshi Okabe

      Version of Record online: 3 JUN 2016 | DOI: 10.1111/1462-2920.13355

    5. Rice false smut fungus hijacks the rice nutrients supply by blocking and mimicking the fertilization of rice ovary

      Jie-Hui Song, Wei Wei, Bo Lv, Yang Lin, Wei-Xiao Yin, You-Liang Peng, Guido Schnabel, Jun-Bin Huang, Dao-Hong Jiang and Chao-Xi Luo

      Version of Record online: 2 JUN 2016 | DOI: 10.1111/1462-2920.13343

    6. Endosomal sorting complexes required for transport-0 is essential for fungal development and pathogenicity in Fusarium graminearum

      Qiurong Xie, Ahai Chen, Wenhui Zheng, Huaijian Xu, Wenjie Shang, Huawei Zheng, Dongmei Zhang, Jie Zhou, Guodong Lu, Guangpu Li and Zonghua Wang

      Version of Record online: 2 JUN 2016 | DOI: 10.1111/1462-2920.13296

    7. Dissection of the contributions of cyclophilin genes to development and virulence in a fungal insect pathogen

      Yonghong Zhou, Nemat O. Keyhani, Yongjun Zhang, Zhibing Luo, Yanhua Fan, Yujie Li, Qiaosheng Zhou, Jianjun Chen and Yan Pei

      Version of Record online: 2 JUN 2016 | DOI: 10.1111/1462-2920.13339

    8. Pyomelanin-producing Pseudomonas aeruginosa selected during chronic infections have a large chromosomal deletion which confers resistance to pyocins

      Didier Hocquet, Marie Petitjean, Laurence Rohmer, Benoît Valot, Hemantha D. Kulasekara, Elodie Bedel, Xavier Bertrand, Patrick Plésiat, Thilo Köhler, Alix Pantel, Michael A. Jacobs, Lucas R. Hoffman and Samuel I. Miller

      Version of Record online: 2 JUN 2016 | DOI: 10.1111/1462-2920.13336

  14. EMI - Research article

    1. You have full text access to this OnlineOpen article
      Impact of an intense water column mixing (0–1500 m) on prokaryotic diversity and activities during an open-ocean convection event in the NW Mediterranean Sea

      Tatiana Severin, Caroline Sauret, Mehdi Boutrif, Thomas Duhaut, Fayçal Kessouri, Louise Oriol, Jocelyne Caparros, Mireille Pujo-Pay, Xavier Durrieu de Madron, Marc Garel, Christian Tamburini, Pascal Conan and Jean-François Ghiglione

      Version of Record online: 2 JUN 2016 | DOI: 10.1111/1462-2920.13324

    2. The distribution, diversity and function of predominant Thermoproteales in high-temperature environments of Yellowstone National Park

      Zackary J. Jay, Jacob P. Beam, Mark A. Kozubal, Ryan deM. Jennings, Douglas B. Rusch and William P. Inskeep

      Version of Record online: 30 MAY 2016 | DOI: 10.1111/1462-2920.13366

    3. A HOPS protein, CmVps39, is required for vacuolar morphology, autophagy, growth, conidiogenesis and mycoparasitic functions of Coniothyrium minitans

      Xiaoxiang Yang, Hui Cui, Jiasen Cheng, Jiatao Xie, Daohong Jiang, Tom Hsiang and Yanping Fu

      Version of Record online: 30 MAY 2016 | DOI: 10.1111/1462-2920.13334

  15. Original Articles

    1. Thioredoxins are involved in the activation of the PMK1 MAP kinase pathway during appressorium penetration and invasive growth in Magnaporthe oryzae

      Shijie Zhang, Cong Jiang, Qiang Zhang, Linlu Qi, Chaohui Li and Jin-Rong Xu

      Version of Record online: 30 MAY 2016 | DOI: 10.1111/1462-2920.13315

  16. Highlight

  17. EMI - Research article

    1. Response of bacterial communities from California coastal waters to alginate particles and an alginolytic Alteromonas macleodii strain

      Maximilian Mitulla, Julie Dinasquet, Ryan Guillemette, Meinhard Simon, Farooq Azam and Matthias Wietz

      Version of Record online: 30 MAY 2016 | DOI: 10.1111/1462-2920.13314

    2. Partitioning of functional and taxonomic diversity in surface-associated microbial communities

      Alexandra J. Roth-Schulze, Enrique Zozaya-Valdés, Peter D. Steinberg and Torsten Thomas

      Version of Record online: 26 MAY 2016 | DOI: 10.1111/1462-2920.13325

    3. An indoleacetate-CoA ligase and a phenylsuccinyl-CoA transferase involved in anaerobic metabolism of auxin

      Karola Schühle, Jonas Nies and Johann Heider

      Version of Record online: 26 MAY 2016 | DOI: 10.1111/1462-2920.13347

    4. Codivergence of the primary bacterial endosymbiont of psyllids versus host switches and replacement of their secondary bacterial endosymbionts

      Aidan A. G. Hall, Jennifer L. Morrow, Caroline Fromont, Martin J. Steinbauer, Gary S. Taylor, Scott N. Johnson, James M. Cook and Markus Riegler

      Version of Record online: 26 MAY 2016 | DOI: 10.1111/1462-2920.13351

    5. Early colonization of functional groups of microbes in the infant gut

      Van T. Pham, Christophe Lacroix, Christian P. Braegger and Christophe Chassard

      Version of Record online: 26 MAY 2016 | DOI: 10.1111/1462-2920.13316

    6. A trait-based approach to bacterial biofilms in soil

      Jay T. Lennon and Brent K. Lehmkuhl

      Version of Record online: 25 MAY 2016 | DOI: 10.1111/1462-2920.13331

  18. EMI - Research Articles

    1. You have full text access to this OnlineOpen article
      Biosynthesis of the acetyl-CoA carboxylase-inhibiting antibiotic, andrimid in Serratia is regulated by Hfq and the LysR-type transcriptional regulator, AdmX

      Miguel A. Matilla, Veronika Nogellova, Bertrand Morel, Tino Krell and George P. C. Salmond

      Version of Record online: 25 MAY 2016 | DOI: 10.1111/1462-2920.13241

  19. Highlight

    1. Towards the minimal nitrogen-fixing symbiotic genome

      Juan Sanjuán

      Version of Record online: 18 MAY 2016 | DOI: 10.1111/1462-2920.13261

  20. EMI - Research Articles

    1. Genetic and functional characterization of a novel meta-pathway for degradation of naringenin in Herbaspirillum seropedicae SmR1

      Anelis Maria Marin, Jésus de la Torre, Alfredo Ricardo Marques Oliveira, Andersson Barison, Leda Satie Chubatsu, Rose Adele Monteiro, Fabio de Oliveira Pedrosa, Emanuel Maltempi de Souza, Roseli Wassem, Estrella Duque and Juan-Luis Ramos

      Version of Record online: 30 APR 2016 | DOI: 10.1111/1462-2920.13313

  21. Highlights

  22. EMI - Research Articles

    1. Isolation and characterization of Dehalobacter sp. strain UNSWDHB capable of chloroform and chlorinated ethane respiration

      Yie K. Wong, Sophie I. Holland, Haluk Ertan, Mike Manefield and Matthew Lee

      Version of Record online: 30 APR 2016 | DOI: 10.1111/1462-2920.13287

    2. You have full text access to this OnlineOpen article
      New biosynthetic pathway for pink pigments from uncultured oceanic viruses

      Benjamin Ledermann, Oded Béjà and Nicole Frankenberg-Dinkel

      Version of Record online: 30 APR 2016 | DOI: 10.1111/1462-2920.13290

    3. Anthropogenic effects on bacterial diversity and function along a river-to-estuary gradient in Northwest Greece revealed by metagenomics

      Alexandra Meziti, Despina Tsementzi, Konstantinos Ar. Kormas, Hera Karayanni and Konstantinos T. Konstantinidis

      Version of Record online: 30 APR 2016 | DOI: 10.1111/1462-2920.13303

    4. Heterotrophic Proteobacteria in the vicinity of diffuse hydrothermal venting

      Dimitri V. Meier, Wolfgang Bach, Peter R. Girguis, Harald R. Gruber-Vodicka, Eoghan P. Reeves, Michael Richter, Charles Vidoudez, Rudolf Amann and Anke Meyerdierks

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13304

    5. Formate-derived H2, a driver of hydrogenotrophic processes in the root-zone of a methane-emitting fen

      Sindy Hunger, Oliver Schmidt, Anita S. Gößner and Harold L. Drake

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13301

  23. Highlights

    1. From function to structure take the archaeal TRAM

      Antoine Danchin*

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13300

  24. EMI - Research Articles

    1. Dynamic, mechanistic, molecular-level modelling of cyanobacteria: Anabaena and nitrogen interaction

      Ferdi L. Hellweger, Neil D. Fredrick, Mark J. McCarthy, Wayne S. Gardner, Steven W. Wilhelm and Hans W. Paerl

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13299

    2. You have full text access to this OnlineOpen article
      RNA viruses as major contributors to Antarctic virioplankton

      Jaclyn A. Miranda, Alexander I. Culley, Christopher R. Schvarcz and Grieg F. Steward

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13291

    3. Stratification of archaeal membrane lipids in the ocean and implications for adaptation and chemotaxonomy of planktonic archaea

      Chun Zhu, Stuart G. Wakeham, Felix J. Elling, Andreas Basse, Gesine Mollenhauer, Gerard J. M. Versteegh, Martin Könneke and Kai-Uwe Hinrichs

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13289

    4. Living on the edge: emergence of spontaneous gac mutations in Pseudomonas protegens during swarming motility

      Chunxu Song, Teresa A. Kidarsa, Judith E. van de Mortel, Joyce E. Loper and Jos M. Raaijmakers

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13288

    5. You have full text access to this OnlineOpen article
      Bacteriophages to reduce gut carriage of antibiotic resistant uropathogens with low impact on microbiota composition

      Matthieu Galtier, Luisa De Sordi, Damien Maura, Harindra Arachchi, Stevenn Volant, Marie-Agnès Dillies and Laurent Debarbieux

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13284

    6. Global transcriptional response of Dickeya dadantii to environmental stimuli relevant to the plant infection

      Xuejiao Jiang, Ouafa Zghidi-Abouzid, Christine Oger-Desfeux, Florence Hommais, Nicolas Greliche, Georgi Muskhelishvili, William Nasser and Sylvie Reverchon

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13267

    7. You have full text access to this OnlineOpen article
      Archaea produce lower yields of N2O than bacteria during aerobic ammonia oxidation in soil

      Linda Hink, Graeme W. Nicol and James I. Prosser

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13282

    8. You have full text access to this OnlineOpen article
      The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis

      Eugeni Belda, Ruben G. A. van Heck, Maria José Lopez-Sanchez, Stéphane Cruveiller, Valérie Barbe, Claire Fraser, Hans-Peter Klenk, Jörn Petersen, Anne Morgat, Pablo I. Nikel, David Vallenet, Zoé Rouy, Agnieszka Sekowska, Vitor A. P. Martins dos Santos, Víctor de Lorenzo, Antoine Danchin and Claudine Médigue

      Version of Record online: 28 APR 2016 | DOI: 10.1111/1462-2920.13230

  25. EMI - Research article

    1. Phenotype and toxicity of the recently discovered exlA-positive Pseudomonas aeruginosa strains collected worldwide

      Emeline Reboud, Sylvie Elsen, Stéphanie Bouillot, Guillaume Golovkine, Pauline Basso, Katy Jeannot, Ina Attrée and Philippe Huber

      Version of Record online: 21 APR 2016 | DOI: 10.1111/1462-2920.13262

    2. Candidatus Adiutrix intracellularis’, an endosymbiont of termite gut flagellates, is the first representative of a deep-branching clade of Deltaproteobacteria and a putative homoacetogen

      Wakako Ikeda-Ohtsubo, Jürgen F. H. Strassert, Tim Köhler, Aram Mikaelyan, Ivan Gregor, Alice C. McHardy, Susannah Green Tringe, Phil Hugenholtz, Renate Radek and Andreas Brune

      Version of Record online: 21 APR 2016 | DOI: 10.1111/1462-2920.13234

    3. TRI6 and TRI10 play different roles in the regulation of deoxynivalenol (DON) production by cAMP signalling in Fusarium graminearum

      Cong Jiang, Chengkang Zhang, Chunlan Wu, Panpan Sun, Rui Hou, Huiquan Liu, Chenfang Wang and Jin-Rong Xu

      Version of Record online: 21 APR 2016 | DOI: 10.1111/1462-2920.13279

    4. Exchange of core chromosomes and horizontal transfer of lineage-specific chromosomes in Fusarium oxysporum

      Ido Vlaardingerbroek, Bas Beerens, Laura Rose, Like Fokkens, Ben J. C. Cornelissen and Martijn Rep

      Version of Record online: 21 APR 2016 | DOI: 10.1111/1462-2920.13281

  26. EMI - Research Articles

    1. You have full text access to this OnlineOpen article
      Nutrient pulses driven by internal solitary waves enhance heterotrophic bacterial growth in the South China Sea

      Tzong-Yueh Chen, Jen-Hua Tai, Chia-Ying Ko, Chih-hao Hsieh, Chung-Chi Chen, Nianzhi Jiao, Hong-Bin Liu and Fuh-Kwo Shiah

      Version of Record online: 8 APR 2016 | DOI: 10.1111/1462-2920.13273

    2. You have full text access to this OnlineOpen article
      Candidatus Desulfofervidus auxilii, a hydrogenotrophic sulfate-reducing bacterium involved in the thermophilic anaerobic oxidation of methane

      Viola Krukenberg, Katie Harding, Michael Richter, Frank Oliver Glöckner, Harald R. Gruber-Vodicka, Birgit Adam, Jasmine S. Berg, Katrin Knittel, Halina E. Tegetmeyer, Antje Boetius and Gunter Wegener

      Version of Record online: 6 APR 2016 | DOI: 10.1111/1462-2920.13283

  27. EMI - Research article

    1. Mechanisms of resistance to linalool in Salmonella Senftenberg and their role in survival on basil

      Emmanuel Kalily, Amit Hollander, Ben Korin, Itamar Cymerman and Sima Yaron

      Version of Record online: 6 APR 2016 | DOI: 10.1111/1462-2920.13268

    2. Modularity of nitrogen-oxide reducing soil bacteria: linking phenotype to genotype

      Constance A. Roco, Linda L. Bergaust, Lars R. Bakken, Joseph B. Yavitt and James P. Shapleigh

      Version of Record online: 21 MAR 2016 | DOI: 10.1111/1462-2920.13250

  28. EMI - Research Articles

    1. Transition from infant- to adult-like gut microbiota

      E. Avershina, K. Lundgård, M. Sekelja, C. Dotterud, O. Storrø, T. Øien, R. Johnsen and K. Rudi

      Version of Record online: 21 MAR 2016 | DOI: 10.1111/1462-2920.13248

  29. Highlight

    1. Environmental treasures: co-isolation of the first marine Chlamydiae and its protozoan host

      Flávia Viana and Carmen Buchrieser

      Version of Record online: 21 MAR 2016 | DOI: 10.1111/1462-2920.13264

  30. EMI - Research Articles

    1. Thiosulfate oxidation by Thiomicrospira thermophila: metabolic flexibility in response to ambient geochemistry

      J. L. Houghton, D. I. Foustoukos, T. M. Flynn, C. Vetriani, Alexander S. Bradley and D. A. Fike

      Version of Record online: 21 MAR 2016 | DOI: 10.1111/1462-2920.13232

  31. EMI - Research article

    1. Membrane association of SadC enhances its diguanylate cyclase activity to control exopolysaccharides synthesis and biofilm formation in Pseudomonas aeruginosa

      Bin Zhu, Cuilan Liu, Shiheng Liu, Hengjiang Cong, Yihuan Chen, Lichuan Gu and Luyan Z. Ma

      Version of Record online: 17 MAR 2016 | DOI: 10.1111/1462-2920.13263

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      Version of Record online: 16 FEB 2016 | DOI: 10.1111/1462-2920.13200

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      Version of Record online: 4 FEB 2016 | DOI: 10.1111/1462-2920.13208

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      Version of Record online: 27 JAN 2016 | DOI: 10.1111/1462-2920.13170

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    4. You have full text access to this OnlineOpen article
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    5. You have full text access to this OnlineOpen article
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      Version of Record online: 21 JAN 2016 | DOI: 10.1111/1462-2920.13158

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