New Phytologist

Cover image for Vol. 198 Issue 4

Early View (Online Version of Record published before inclusion in an issue)

Edited By: Alistair M. Hetherington

Impact Factor: 6.645

ISI Journal Citation Reports © Ranking: 2011: 6/190 (Plant Sciences)

Online ISSN: 1469-8137

  1. Full papers

    1. Genotypic variation in traits linked to climate and aboveground productivity in a widespread C4 grass: evidence for a functional trait syndrome

      Michael J. Aspinwall, David B. Lowry, Samuel H. Taylor, Thomas E. Juenger, Christine V. Hawkes, Mari-Vaughn V. Johnson, James R. Kiniry and Philip A. Fay

      Article first published online: 23 MAY 2013 | DOI: 10.1111/nph.12341

    2. Evidence for adaptive evolution of low-temperature stress response genes in a Pooideae grass ancestor

      Magnus D. Vigeland, Manuel Spannagl, Torben Asp, Cristiana Paina, Heidi Rudi, Odd-Arne Rognli, Siri Fjellheim and Simen R. Sandve

      Article first published online: 23 MAY 2013 | DOI: 10.1111/nph.12337

    3. You have full text access to this OnlineOpen article
      The glutathione transferase of Nicotiana benthamiana NbGSTU4 plays a role in regulating the early replication of Bamboo mosaic virus

      I-Hsuan Chen, Meng-Hsuen Chiu, Shun-Fang Cheng, Yau-Heiu Hsu and Ching-Hsiu Tsai

      Article first published online: 23 MAY 2013 | DOI: 10.1111/nph.12304

    4. Void space inside the developing seed of Brassica napus and the modelling of its function

      Pieter Verboven, Els Herremans, Ljudmilla Borisjuk, Lukas Helfen, Quang Tri Ho, Henning Tschiersch, Johannes Fuchs, Bart M. Nicolaï and Hardy Rolletschek

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12342

    5. Silencing of the chalcone synthase gene in Casuarina glauca highlights the important role of flavonoids during nodulation

      Khalid Abdel-Lateif, Virginie Vaissayre, Hassen Gherbi, Clotilde Verries, Emmanuelle Meudec, Francine Perrine-Walker, Véronique Cheynier, Sergio Svistoonoff, Claudine Franche, Didier Bogusz and Valérie Hocher

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12326

    6. Breaking the DNA-binding code of Ralstonia solanacearum TAL effectors provides new possibilities to generate plant resistance genes against bacterial wilt disease

      Orlando de Lange, Tom Schreiber, Niklas Schandry, Jara Radeck, Karl Heinz Braun, Julia Koszinowski, Holger Heuer, Annett Strauß and Thomas Lahaye

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12324

  2. Research reviews

    1. 32S/34S isotope fractionation in plant sulphur metabolism

      Guillaume Tcherkez and Illa Tea

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12314

  3. Letters

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      Understanding ecological variation across species: area-based vs mass-based expression of leaf traits

      Mark Westoby, Peter B. Reich and Ian J. Wright

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12345

  4. Tansley reviews

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      Spatiotemporal changes in the role of cytokinin during root development

      Marta Del Bianco, Leonardo Giustini and Sabrina Sabatini

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12338

  5. Full papers

  6. Tansley reviews

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      Nematode effector proteins: an emerging paradigm of parasitism

      Melissa G. Mitchum, Richard S. Hussey, Thomas J. Baum, Xiaohong Wang, Axel A. Elling, Martin Wubben and Eric L. Davis

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12323

  7. Full papers

    1. Vegetation limits the impact of a warm climate on boreal wildfires

      Martin P. Girardin, Adam A. Ali, Christopher Carcaillet, Olivier Blarquez, Christelle Hély, Aurélie Terrier, Aurélie Genries and Yves Bergeron

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12322

    2. Nonagricultural reservoirs contribute to emergence and evolution of Pseudomonas syringae crop pathogens

      Caroline L. Monteil, Rongman Cai, Haijie Liu, Marco E. Mechan Llontop, Scotland Leman, David J. Studholme, Cindy E. Morris and Boris A. Vinatzer

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12316

    3. Transcriptome analysis of the sulfate deficiency response in the marine microalga Emiliania huxleyi

      Michal Bochenek, Graham J. Etherington, Anna Koprivova, Sam T. Mugford, Thomas G. Bell, Gill Malin and Stanislav Kopriva

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12303

    4. Topographic and soil influences on root productivity of three bioenergy cropping systems

      Todd A. Ontl, Kirsten S. Hofmockel, Cynthia A. Cambardella, Lisa A. Schulte and Randall K. Kolka

      Article first published online: 21 MAY 2013 | DOI: 10.1111/nph.12302

    5. OakContigDF159.1, a reference library for studying differential gene expression in Quercus robur during controlled biotic interactions: use for quantitative transcriptomic profiling of oak roots in ectomycorrhizal symbiosis

      Mika T. Tarkka, Sylvie Herrmann, Tesfaye Wubet, Lasse Feldhahn, Sabine Recht, Florence Kurth, Sarah Mailänder, Markus Bönn, Maren Neef, Oguzhan Angay, Michael Bacht, Marcel Graf, Hazel Maboreke, Frank Fleischmann, Thorsten E. E. Grams, Liliane Ruess, Martin Schädler, Roland Brandl, Stefan Scheu, Silvia D. Schrey, Ivo Grosse and François Buscot

      Article first published online: 15 MAY 2013 | DOI: 10.1111/nph.12317

    6. Intraspecific variation of a desert shrub species in phenotypic plasticity in response to sand burial

      Liang Xu, Heidrun Huber, Heinjo J. During, Ming Dong and Niels P. R. Anten

      Article first published online: 15 MAY 2013 | DOI: 10.1111/nph.12315

  8. Tansley reviews

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      Bioengineering of plant (tri)terpenoids: from metabolic engineering of plants to synthetic biology in vivo and in vitro

      Tessa Moses, Jacob Pollier, Johan M. Thevelein and Alain Goossens

      Article first published online: 14 MAY 2013 | DOI: 10.1111/nph.12325

  9. Full papers

  10. Rapid reports

    1. NSP1 is a component of the Myc signaling pathway

      Pierre-Marc Delaux, Guillaume Bécard and Jean-Philippe Combier

      Article first published online: 13 MAY 2013 | DOI: 10.1111/nph.12340

  11. Full papers

    1. Transgenerational effects of plant sex and arbuscular mycorrhizal symbiosis

      Sandra Varga, Rocío Vega-Frutis and Minna-Maarit Kytöviita

      Article first published online: 9 MAY 2013 | DOI: 10.1111/nph.12305

    2. Stored carbon partly fuels fine-root respiration but is not used for production of new fine roots

      Douglas J. Lynch, Roser Matamala, Colleen M. Iversen, Richard J. Norby and Miquel A. Gonzalez-Meler

      Article first published online: 7 MAY 2013 | DOI: 10.1111/nph.12290

    3. mCSF1, a nucleus-encoded CRM protein required for the processing of many mitochondrial introns, is involved in the biogenesis of respiratory complexes I and IV in Arabidopsis

      Michal Zmudjak, Catherine Colas des Francs-Small, Ido Keren, Felix Shaya, Eduard Belausov, Ian Small and Oren Ostersetzer-Biran

      Article first published online: 7 MAY 2013 | DOI: 10.1111/nph.12282

    4. Unified changes in cell size permit coordinated leaf evolution

      Tim J. Brodribb, Greg J. Jordan and Raymond J. Carpenter

      Article first published online: 7 MAY 2013 | DOI: 10.1111/nph.12300

  12. Rapid reports

    1. The mechanism of ORFH79 suppression with the artificial restorer fertility gene Mt-GRP162

      Jun Hu, Wenchao Huang, Qi Huang, Xiaojian Qin, Zhiwu Dan, Guoxin Yao, Renshan Zhu and Yingguo Zhu

      Article first published online: 7 MAY 2013 | DOI: 10.1111/nph.12310

  13. Full papers

    1. Physiological and metabolic consequences of autophagy deficiency for the management of nitrogen and protein resources in Arabidopsis leaves depending on nitrate availability

      Anne Guiboileau, Liliana Avila-Ospina, Kohki Yoshimoto, Fabienne Soulay, Marianne Azzopardi, Anne Marmagne, Jérémy Lothier and Céline Masclaux-Daubresse

      Article first published online: 7 MAY 2013 | DOI: 10.1111/nph.12307

  14. Research reviews

  15. Full papers

    1. The regulation of cambial activity in Chinese fir (Cunninghamia lanceolata) involves extensive transcriptome remodeling

      Zongbo Qiu, Lichuan Wan, Tong Chen, Yinglang Wan, Xinqiang He, Shanfa Lu, Yanwei Wang and Jinxing Lin

      Article first published online: 2 MAY 2013 | DOI: 10.1111/nph.12301

    2. The metabolite chemotype of Nicotiana benthamiana transiently expressing artemisinin biosynthetic pathway genes is a function of CYP71AV1 type and relative gene dosage

      Hieng-Ming Ting, Bo Wang, Anna-Margareta Rydén, Lotte Woittiez, Teun van Herpen, Francel W. A. Verstappen, Carolien Ruyter-Spira, Jules Beekwilder, Harro J. Bouwmeester and Alexander van der Krol

      Article first published online: 2 MAY 2013 | DOI: 10.1111/nph.12274

    3. Direct and legacy effects of long-term elevated CO2 on fine root growth and plant–insect interactions

      Peter Stiling, Daniel Moon, Anthony Rossi, Rebecca Forkner, Bruce A. Hungate, Frank P. Day, Rachel E. Schroeder and Bert Drake

      Article first published online: 2 MAY 2013 | DOI: 10.1111/nph.12295

  16. Tansley reviews

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      Protein actors sustaining arbuscular mycorrhizal symbiosis: underground artists break the silence

      Ghislaine Recorbet, Cosette Abdallah, Jenny Renaut, Daniel Wipf and Eliane Dumas-Gaudot

      Article first published online: 2 MAY 2013 | DOI: 10.1111/nph.12287

  17. Full papers

    1. MtQRRS1, an R-locus required for Medicago truncatula quantitative resistance to Ralstonia solanacearum

      Cécile Ben, Frédéric Debellé, Hélène Berges, Arnaud Bellec, Marie-Françoise Jardinaud, Philippe Anson, Thierry Huguet, Laurent Gentzbittel and Fabienne Vailleau

      Article first published online: 2 MAY 2013 | DOI: 10.1111/nph.12299

  18. Rapid report

    1. Host-specific salivary elicitor(s) of European corn borer induce defenses in tomato and maize

      Joe Louis, Michelle Peiffer, Swayamjit Ray, Dawn S. Luthe and Gary W. Felton

      Article first published online: 29 APR 2013 | DOI: 10.1111/nph.12308

  19. Full papers

    1. Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of the Nramp6 (Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance

      Sonia Campo, Cristina Peris-Peris, Christelle Siré, Ana Beatriz Moreno, Livia Donaire, Matthias Zytnicki, Cedric Notredame, César Llave and Blanca San Segundo

      Article first published online: 29 APR 2013 | DOI: 10.1111/nph.12292

    2. The glutamate carboxypeptidase AMP1 mediates abscisic acid and abiotic stress responses in Arabidopsis

      Yiting Shi, Zheng Wang, Pei Meng, Siqi Tian, Xiaoyan Zhang and Shuhua Yang

      Article first published online: 29 APR 2013 | DOI: 10.1111/nph.12275

  20. Letters

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  21. Full papers

    1. High-copy sequences reveal distinct evolution of the rye B chromosome

      Sonja Klemme, Ali Mohammad Banaei-Moghaddam, Jiri Macas, Thomas Wicker, Petr Novák and Andreas Houben

      Article first published online: 24 APR 2013 | DOI: 10.1111/nph.12289

    2. Geminivirus Rep protein interferes with the plant DNA methylation machinery and suppresses transcriptional gene silencing

      Edgar Rodríguez-Negrete, Rosa Lozano-Durán, Alvaro Piedra-Aguilera, Lucia Cruzado, Eduardo R. Bejarano and Araceli G. Castillo

      Article first published online: 24 APR 2013 | DOI: 10.1111/nph.12286

    3. The role of mosses in carbon uptake and partitioning in arctic vegetation

      Lorna E. Street, Jens-Arne Subke, Martin Sommerkorn, Victoria Sloan, Helene Ducrotoy, Gareth K. Phoenix and Mathew Williams

      Article first published online: 24 APR 2013 | DOI: 10.1111/nph.12285

    4. Copper speciation and isotopic fractionation in plants: uptake and translocation mechanisms

      Brooke M. Ryan, Jason K. Kirby, Fien Degryse, Hugh Harris, Mike J. McLaughlin and Kathleen Scheiderich

      Article first published online: 18 APR 2013 | DOI: 10.1111/nph.12276

    5. Interspecific temporal and spatial differences in the acquisition of litter-derived nitrogen by ectomycorrhizal fungal assemblages

      Rodica Pena, Javier Tejedor, Bernd Zeller, Michael Dannenmann and Andrea Polle

      Article first published online: 18 APR 2013 | DOI: 10.1111/nph.12272

    6. Elevated CO2 spurs reciprocal positive effects between a plant virus and an arbuscular mycorrhizal fungus

      Megan A. Rúa, James Umbanhowar, Shuijin Hu, Kent O. Burkey and Charles E. Mitchell

      Article first published online: 18 APR 2013 | DOI: 10.1111/nph.12273

  22. Rapid reports

    1. Shoot desiccation and hydraulic failure in temperate woody angiosperms during an extreme summer drought

      Andrea Nardini, Marta Battistuzzo and Tadeja Savi

      Article first published online: 18 APR 2013 | DOI: 10.1111/nph.12288

  23. Research reviews

  24. Full papers

    1. The Phytophthora parasitica RXLR effector Penetration-Specific Effector 1 favours Arabidopsis thaliana infection by interfering with auxin physiology

      Edouard Evangelisti, Benjamin Govetto, Naïma Minet-Kebdani, Marie-Line Kuhn, Agnès Attard, Michel Ponchet, Franck Panabières and Mathieu Gourgues

      Article first published online: 17 APR 2013 | DOI: 10.1111/nph.12270

    2. Drought-induced defoliation and long periods of near-zero gas exchange play a key role in accentuating metabolic decline of Scots pine

      Rafael Poyatos, David Aguadé, Lucía Galiano, Maurizio Mencuccini and Jordi Martínez-Vilalta

      Article first published online: 17 APR 2013 | DOI: 10.1111/nph.12278

  25. Research reviews

    1. Ecosystem-level controls on root-rhizosphere respiration

      Francesca Hopkins, Miquel A. Gonzalez-Meler, Charles E. Flower, Douglas J. Lynch, Claudia Czimczik, Jianwu Tang and Jens-Arne Subke

      Article first published online: 17 APR 2013 | DOI: 10.1111/nph.12271

  26. Tansley reviews

    1. You have free access to this content
      The Arabidopsis embryo as a miniature morphogenesis model

      Jos R. Wendrich and Dolf Weijers

      Article first published online: 16 APR 2013 | DOI: 10.1111/nph.12267

  27. Full papers

    1. Stable carbon isotope labeling reveals different carry-over effects between functional types of tropical trees in an Ethiopian mountain forest

      Julia Krepkowski, Aster Gebrekirstos, Olga Shibistova and Achim Bräuning

      Article first published online: 16 APR 2013 | DOI: 10.1111/nph.12266

    2. Transcriptome divergence between introduced and native populations of Canada thistle, Cirsium arvense

      Alessia Guggisberg, Zhao Lai, Jie Huang and Loren H. Rieseberg

      Article first published online: 16 APR 2013 | DOI: 10.1111/nph.12258

    3. Arabidopsis phospholipase Dβ1 modulates defense responses to bacterial and fungal pathogens

      Jian Zhao, Shivakumar P. Devaiah, Cunxi Wang, Maoyin Li, Ruth Welti and Xuemin Wang

      Article first published online: 12 APR 2013 | DOI: 10.1111/nph.12256

    4. Fine-scale spatial genetic structure of the black truffle (Tuber melanosporum) investigated with neutral microsatellites and functional mating type genes

      Claude Murat, Andrea Rubini, Claudia Riccioni, Herminia De la Varga, Emila Akroume, Beatrice Belfiori, Marco Guaragno, François Le Tacon, Christophe Robin, Fabien Halkett, Francis Martin and Francesco Paolocci

      Article first published online: 10 APR 2013 | DOI: 10.1111/nph.12264

    5. Ectopic expression of Kip-related proteins restrains root-knot nematode-feeding site expansion

      Paulo Vieira, Carmen Escudero, Natalia Rodiuc, Joanna Boruc, Eugenia Russinova, Nathalie Glab, Manuel Mota, Lieven De Veylder, Pierre Abad, Gilbert Engler and Janice de Almeida Engler

      Article first published online: 10 APR 2013 | DOI: 10.1111/nph.12255

    6. Hemlock woolly adelgid (Adelges tsugae) infestation affects water and carbon relations of eastern hemlock (Tsuga canadensis) and Carolina hemlock (Tsuga caroliniana)

      Jean-Christophe Domec, Laura N. Rivera, John S. King, Ilona Peszlen, Fred Hain, Benjamin Smith and John Frampton

      Article first published online: 8 APR 2013 | DOI: 10.1111/nph.12263

    7. Global diversity and distribution of three necrotrophic effectors in Phaeosphaeria nodorum and related species

      Megan C. McDonald, Richard P. Oliver, Timothy L. Friesen, Patrick C. Brunner and Bruce A. McDonald

      Article first published online: 4 APR 2013 | DOI: 10.1111/nph.12257

    8. A meta-analysis of experimental warming effects on terrestrial nitrogen pools and dynamics

      Edith Bai, Shanlong Li, Wenhua Xu, Wei Li, Weiwei Dai and Ping Jiang

      Article first published online: 4 APR 2013 | DOI: 10.1111/nph.12252

    9. ABSCISIC ACID INSENSITIVE3 regulates abscisic acid-responsive gene expression with the nuclear factor Y complex through the ACTT-core element in Physcomitrella patens

      Izumi Yotsui, Masashi Saruhashi, Takahiro Kawato, Teruaki Taji, Takahisa Hayashi, Ralph S. Quatrano and Yoichi Sakata

      Article first published online: 4 APR 2013 | DOI: 10.1111/nph.12251

    10. Genome size variation in wild and cultivated maize along altitudinal gradients

      Concepción M. Díez, Brandon S. Gaut, Esteban Meca, Enrique Scheinvar, Salvador Montes-Hernandez, Luis E. Eguiarte and Maud I. Tenaillon

      Article first published online: 2 APR 2013 | DOI: 10.1111/nph.12247

    11. Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential

      Jared W. Westbrook, Marcio F. R. Resende Jr, Patricio Munoz, Alejandro R. Walker, Jill L. Wegrzyn, C. Dana Nelson, David B. Neale, Matias Kirst, Dudley A. Huber, Salvador A. Gezan, Gary F. Peter and John M. Davis

      Article first published online: 28 MAR 2013 | DOI: 10.1111/nph.12240

    12. You have free access to this content
  28. Methods

    1. You have full text access to this OnlineOpen article
      Fungal community analysis by high-throughput sequencing of amplified markers – a user's guide

      Björn D. Lindahl, R. Henrik Nilsson, Leho Tedersoo, Kessy Abarenkov, Tor Carlsen, Rasmus Kjøller, Urmas Kõljalg, Taina Pennanen, Søren Rosendahl, Jan Stenlid and Håvard Kauserud

      Article first published online: 28 MAR 2013 | DOI: 10.1111/nph.12243

  29. Full papers

    1. The effects of 11 yr of CO2 enrichment on roots in a Florida scrub-oak ecosystem

      Frank P. Day, Rachel E. Schroeder, Daniel B. Stover, Alisha L. P. Brown, John R. Butnor, John Dilustro, Bruce A. Hungate, Paul Dijkstra, Benjamin D. Duval, Troy J. Seiler, Bert G. Drake and C. Ross Hinkle

      Article first published online: 25 MAR 2013 | DOI: 10.1111/nph.12246

  30. Research reviews

    1. Recognition of bacterial plant pathogens: local, systemic and transgenerational immunity

      Elizabeth Henry, Koste A. Yadeta and Gitta Coaker

      Article first published online: 20 MAR 2013 | DOI: 10.1111/nph.12214

  31. Full papers

    1. Dissecting the impact of CO2 and pH on the mechanisms of photosynthesis and calcification in the coccolithophore Emiliania huxleyi

      Lennart T. Bach, Luke C. M. Mackinder, Kai G. Schulz, Glen Wheeler, Declan C. Schroeder, Colin Brownlee and Ulf Riebesell

      Article first published online: 15 MAR 2013 | DOI: 10.1111/nph.12225

  32. Tansley reviews

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