Molecular Ecology Resources

Cover image for Vol. 14 Issue 3

Early View (Online Version of Record published before inclusion in an issue)

Edited By: Shawn Narum

Impact Factor: 7.432

ISI Journal Citation Reports © Ranking: 2012: 5/47 (Evolutionary Biology); 7/136 (Ecology); 30/290 (Biochemistry & Molecular Biology)

Online ISSN: 1755-0998

Associated Title(s): Molecular Ecology


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  1. Resource Articles

    1. Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies

      Cédric Mariac, Nora Scarcelli, Juliette Pouzadou, Adeline Barnaud, Claire Billot, Adama Faye, Ayite Kougbeadjo, Vincent Maillol, Guillaume Martin, François Sabot, Sylvain Santoni, Yves Vigouroux and Thomas L. P. Couvreur

      Article first published online: 23 APR 2014 | DOI: 10.1111/1755-0998.12258

    2. Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects barcoding accuracy of its freshwater fishes

      M. F. Geiger, F. Herder, M. T. Monaghan, V. Almada, R. Barbieri, M. Bariche, P. Berrebi, J. Bohlen, M. Casal-Lopez, G. B. Delmastro, G. P. J. Denys, A. Dettai, I. Doadrio, E. Kalogianni, H. Kärst, M. Kottelat, M. Kovačić, M. Laporte, M. Lorenzoni, Z. Marčić, M. Özuluğ, A. Perdices, S. Perea, H. Persat, S. Porcelotti, C. Puzzi, J. Robalo, R. Šanda, M. Schneider, V. Šlechtová, M. Stoumboudi, S. Walter and J. Freyhof

      Article first published online: 15 APR 2014 | DOI: 10.1111/1755-0998.12257

    3. Automated DNA-based plant identification for large-scale biodiversity assessment

      Anna Papadopoulou, Douglas Chesters, Indiana Coronado, Gissela De la Cadena, Anabela Cardoso, Jazmina C. Reyes, Jean-Michel Maes, Ricardo M. Rueda and Jesús Gómez-Zurita

      Article first published online: 12 APR 2014 | DOI: 10.1111/1755-0998.12256

    4. MrEnt: an editor for publication-quality phylogenetic tree illustrations

      Alessandro Zuccon and Dario Zuccon

      Article first published online: 12 APR 2014 | DOI: 10.1111/1755-0998.12253

    5. Tissue storage and primer selection influence pyrosequencing-based inferences of diversity and community composition of endolichenic and endophytic fungi

      Jana M. U'Ren, Jakob M. Riddle, James T. Monacell, Ignazio Carbone, Jolanta Miadlikowska and A. Elizabeth Arnold

      Article first published online: 10 APR 2014 | DOI: 10.1111/1755-0998.12252

    6. Sequence capture using PCR-generated probes: a cost-effective method of targeted high-throughput sequencing for nonmodel organisms

      Joshua V. Peñalba, Lydia L. Smith, Maria A. Tonione, Chodon Sass, Sarah M. Hykin, Phillip L. Skipwith, Jimmy A. McGuire, Rauri C. K. Bowie and Craig Moritz

      Article first published online: 7 APR 2014 | DOI: 10.1111/1755-0998.12249

    7. You have full text access to this OnlineOpen article
      Epigenetic estimation of age in humpback whales

      Andrea M. Polanowski, Jooke Robbins, David Chandler and Simon N. Jarman

      Article first published online: 7 APR 2014 | DOI: 10.1111/1755-0998.12247

    8. Identification of putative orthologous genes for the phylogenetic reconstruction of temperate woody bamboos (Poaceae: Bambusoideae)

      Li-Na Zhang, Xian-Zhi Zhang, Yu-Xiao Zhang, Chun-Xia Zeng, Peng-Fei Ma, Lei Zhao, Zhen-Hua Guo and De-Zhu Li

      Article first published online: 2 APR 2014 | DOI: 10.1111/1755-0998.12248

    9. Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family

      Pierre-Jean G. Malé, Léa Bardon, Guillaume Besnard, Eric Coissac, Frédéric Delsuc, Julien Engel, Emeline Lhuillier, Caroline Scotti-Saintagne, Alexandra Tinaut and Jérôme Chave

      Article first published online: 2 APR 2014 | DOI: 10.1111/1755-0998.12246

    10. Genome- and transcriptome-assisted development of nuclear insertion/deletion markers for Calanus species (Copepoda: Calanoida) identification

      I. Smolina, S. Kollias, M. Poortvliet, T. G. Nielsen, P. Lindeque, C. Castellani, E. F. Møller, L. Blanco-Bercial and G. Hoarau

      Article first published online: 24 MAR 2014 | DOI: 10.1111/1755-0998.12241

    11. You have full text access to this OnlineOpen article
    12. You have full text access to this OnlineOpen article
      Rapid and accurate taxonomic classification of insect (class Insecta) cytochrome c oxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier

      Teresita M. Porter, Joel F. Gibson, Shadi Shokralla, Donald J. Baird, G. Brian Golding and Mehrdad Hajibabaei

      Article first published online: 19 MAR 2014 | DOI: 10.1111/1755-0998.12240

    13. Impact of primer choice on characterization of orchid mycorrhizal communities using 454 pyrosequencing

      Michael Waud, Pieter Busschaert, Stefan Ruyters, Hans Jacquemyn and Bart Lievens

      Article first published online: 14 MAR 2014 | DOI: 10.1111/1755-0998.12229

    14. GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis

      Qichao Tu, Hao Yu, Zhili He, Ye Deng, Liyou Wu, Joy D. Van Nostrand, Aifen Zhou, James Voordeckers, Yong-Jin Lee, Yujia Qin, Christopher L. Hemme, Zhou Shi, Kai Xue, Tong Yuan, Aijie Wang and Jizhong Zhou

      Article first published online: 14 MAR 2014 | DOI: 10.1111/1755-0998.12239

    15. A reliable DNA barcode reference library for the identification of the North European shelf fish fauna

      Thomas Knebelsberger, Monica Landi, Hermann Neumann, Matthias Kloppmann, Anne F. Sell, Patrick D. Campbell, Silke Laakmann, Michael J. Raupach, Gary R. Carvalho and Filipe O. Costa

      Article first published online: 12 MAR 2014 | DOI: 10.1111/1755-0998.12238

    16. Using microwaves to prepare gastropods for DNA barcoding

      L. A. Galindo, N. Puillandre, E. E. Strong and P. Bouchet

      Article first published online: 10 MAR 2014 | DOI: 10.1111/1755-0998.12231

    17. You have full text access to this OnlineOpen article
    18. PCR-based isolation of multigene families: lessons from the avian MHC class IIB

      R. Burri, M. Promerová, J. Goebel and L. Fumagalli

      Article first published online: 7 MAR 2014 | DOI: 10.1111/1755-0998.12234

    19. Conserved genetic regions across angiosperms as tools to develop single-copy nuclear markers in gymnosperms: an example using cycads

      Dayana E. Salas-Leiva, Alan W. Meerow, Javier Francisco-Ortega, Michael Calonje, M. Patrick Griffith, Dennis W. Stevenson and Kyoko Nakamura

      Article first published online: 5 MAR 2014 | DOI: 10.1111/1755-0998.12228

    20. Development of SNP-genotyping arrays in two shellfish species

      S. Lapègue, E. Harrang, S. Heurtebise, E. Flahauw, C. Donnadieu, P. Gayral, M. Ballenghien, L. Genestout, L. Barbotte, R. Mahla, P. Haffray and C. Klopp

      Article first published online: 5 MAR 2014 | DOI: 10.1111/1755-0998.12230

    21. First insights into the transcriptome and development of new genomic tools of a widespread circum-Mediterranean tree species, Pinus halepensis Mill

      S. Pinosio, S. C. González-Martínez, F. Bagnoli, F. Cattonaro, D. Grivet, F. Marroni, Z. Lorenzo, J. G. Pausas, M. Verdú and G. G. Vendramin

      Article first published online: 4 MAR 2014 | DOI: 10.1111/1755-0998.12232

    22. You have full text access to this OnlineOpen article
      Next-generation DNA barcoding: using next-generation sequencing to enhance and accelerate DNA barcode capture from single specimens

      Shadi Shokralla, Joel F. Gibson, Hamid Nikbakht, Daniel H. Janzen, Winnie Hallwachs and Mehrdad Hajibabaei

      Article first published online: 19 FEB 2014 | DOI: 10.1111/1755-0998.12236

    23. Genome-wide variation within and between wild and domestic yak

      Kun Wang, Quanjun Hu, Hui Ma, Lizhong Wang, Yongzhi Yang, Wenchun Luo and Qiang Qiu

      Article first published online: 10 FEB 2014 | DOI: 10.1111/1755-0998.12226

    24. A pairwise relatedness estimator for polyploids

      Kang Huang, Kermit Ritland, Songtao Guo, Milena Shattuck and Baoguo Li

      Article first published online: 27 JAN 2014 | DOI: 10.1111/1755-0998.12217

    25. Diagnostic gene expression biomarkers of coral thermal stress

      C. D. Kenkel, C. Sheridan, M. C. Leal, R. Bhagooli, K. D. Castillo, N. Kurata, E. McGinty, T. L. Goulet and M. V. Matz

      Article first published online: 10 JAN 2014 | DOI: 10.1111/1755-0998.12218


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