Molecular Ecology Resources

Cover image for Vol. 14 Issue 5

Early View (Online Version of Record published before inclusion in an issue)

Edited By: Shawn Narum

Impact Factor: 5.626

ISI Journal Citation Reports © Ranking: 2013: 7/46 (Evolutionary Biology); 13/140 (Ecology); 46/291 (Biochemistry & Molecular Biology)

Online ISSN: 1755-0998

Associated Title(s): Molecular Ecology


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  1. Resource Articles

    1. phylin: an r package for phylogeographic interpolation

      Pedro Tarroso, Guillermo Velo-Antón and Sílvia B. Carvalho

      Article first published online: 27 AUG 2014 | DOI: 10.1111/1755-0998.12312

    2. Ten real-time PCR assays for detection of fish predation at the community level in the San Francisco Estuary–Delta

      Scott Brandl, Gregg Schumer, Brian M. Schreier, Jessica L. Conrad, Bernie May and Melinda R. Baerwald

      Article first published online: 13 AUG 2014 | DOI: 10.1111/1755-0998.12305

    3. Phylogenetic exploration of commonly used medicinal plants in South Africa

      Kowiyou Yessoufou, Barnabas H. Daru and Abraham Muthama Muasya

      Article first published online: 12 AUG 2014 | DOI: 10.1111/1755-0998.12310

    4. Discovery and validation of gene-linked diagnostic SNP markers for assessing hybridization between Largemouth bass (Micropterus salmoides) and Florida bass (M. floridanus)

      Chao Li, Spencer Gowan, Ammu Anil, Benjamin H. Beck, Wilawan Thongda, Huseyin Kucuktas, Ludmilla Kaltenboeck and Eric Peatman

      Article first published online: 11 AUG 2014 | DOI: 10.1111/1755-0998.12308

    5. QSTFST comparisons with unbalanced half-sib designs

      Kimberly J. Gilbert and Michael C. Whitlock

      Article first published online: 8 AUG 2014 | DOI: 10.1111/1755-0998.12303

    6. A single-nucleotide polymorphism-based approach for rapid and cost-effective genetic wolf monitoring in Europe based on noninvasively collected samples

      Robert H. S. Kraus, Bridgett vonHoldt, Berardino Cocchiararo, Verena Harms, Helmut Bayerl, Ralph Kühn, Daniel W. Förster, Jörns Fickel, Christian Roos and Carsten Nowak

      Article first published online: 8 AUG 2014 | DOI: 10.1111/1755-0998.12307

    7. Targeted detection of mammalian species using carrion fly-derived DNA

      Grit Schubert, Melanie Stockhausen, Constanze Hoffmann, Kevin Merkel, Linda Vigilant, Fabian H. Leendertz and Sébastien Calvignac-Spencer

      Article first published online: 4 AUG 2014 | DOI: 10.1111/1755-0998.12306

    8. Silica particles with encapsulated DNA as trophic tracers

      C. A. Mora, D. Paunescu, R. N. Grass and W. J. Stark

      Article first published online: 21 JUL 2014 | DOI: 10.1111/1755-0998.12299

    9. Identifying the ichthyoplankton of a coral reef using DNA barcodes

      Nicolas Hubert, Benoit Espiau, Christopher Meyer and Serge Planes

      Article first published online: 18 JUL 2014 | DOI: 10.1111/1755-0998.12293

    10. You have full text access to this OnlineOpen article
      Genome assembly and annotation of a Drosophila simulans strain from Madagascar

      Nicola Palmieri, Viola Nolte, Jun Chen and Christian Schlötterer

      Article first published online: 13 JUL 2014 | DOI: 10.1111/1755-0998.12297

    11. Identification of species and materia medica within Angelica L. (Umbelliferae) based on phylogeny inferred from DNA barcodes

      Qing-Jun Yuan, Bin Zhang, Dan Jiang, Wen-Jing Zhang, Tsai-Yun Lin, Nian-He Wang, Shu-Jiau Chiou and Lu-Qi Huang

      Article first published online: 10 JUL 2014 | DOI: 10.1111/1755-0998.12296

    12. A metagenetic approach for revealing community structure of marine planktonic copepods

      J. Hirai, M. Kuriyama, T. Ichikawa, K. Hidaka and A. Tsuda

      Article first published online: 5 JUL 2014 | DOI: 10.1111/1755-0998.12294

    13. Molecular taxonomic identification in the absence of a ‘barcoding gap’: a test with the endemic flora of the Canarian oceanic hotspot

      Ruth Jaén-Molina, Águedo Marrero-Rodríguez, J. Alfredo Reyes-Betancort, Arnoldo Santos-Guerra, José Naranjo-Suárez and Juli Caujapé-Castells

      Article first published online: 3 JUL 2014 | DOI: 10.1111/1755-0998.12292

    14. A likelihood-based approach for assessment of extra-pair paternity and conspecific brood parasitism in natural populations

      P. R. Lemons, T. C. Marshall, S. E. McCloskey, S. A. Sethi, J. A. Schmutz and J. S. Sedinger

      Article first published online: 3 JUL 2014 | DOI: 10.1111/1755-0998.12287

    15. Efficient development of highly polymorphic microsatellite markers based on polymorphic repeats in transcriptome sequences of multiple individuals

      M. Vukosavljev, G. D. Esselink, W. P. C. van ’t Westende, P. Cox, R. G. F. Visser, P. Arens and M. J. M. Smulders

      Article first published online: 28 JUN 2014 | DOI: 10.1111/1755-0998.12289

    16. Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing

      Ken Kraaijeveld, Letty A. de Weger, Marina Ventayol García, Henk Buermans, Jeroen Frank, Pieter S. Hiemstra and Johan T. den Dunnen

      Article first published online: 17 JUN 2014 | DOI: 10.1111/1755-0998.12288

    17. De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome

      Péter Szövényi, Pierre-François Perroud, Aikaterini Symeonidi, Sean Stevenson, Ralph S. Quatrano, Stefan A. Rensing, Andrew C. Cuming and Stuart F. McDaniel

      Article first published online: 13 JUN 2014 | DOI: 10.1111/1755-0998.12284

    18. Distance, flow and PCR inhibition: eDNA dynamics in two headwater streams

      Stephen F. Jane, Taylor M. Wilcox, Kevin S. McKelvey, Michael K. Young, Michael K. Schwartz, Winsor H. Lowe, Benjamin H. Letcher and Andrew R. Whiteley

      Article first published online: 13 JUN 2014 | DOI: 10.1111/1755-0998.12285

    19. DNA barcoding reveals 24 distinct lineages as cryptic bird species candidates in and around the Japanese Archipelago

      Takema Saitoh, Norimasa Sugita, Sayaka Someya, Yasuko Iwami, Sayaka Kobayashi, Hiromi Kamigaichi, Aki Higuchi, Shigeki Asai, Yoshihiro Yamamoto and Isao Nishiumi

      Article first published online: 11 JUN 2014 | DOI: 10.1111/1755-0998.12282

    20. Discovery and validation of genic single nucleotide polymorphisms in the Pacific oyster Crassostrea gigas

      Jiafeng Wang, Haigang Qi, Li Li, Huayong Que, Di Wang and Guofan Zhang

      Article first published online: 11 JUN 2014 | DOI: 10.1111/1755-0998.12278

    21. You have full text access to this OnlineOpen article
    22. DNA barcoding of Murinae (Rodentia: Muridae) and Arvicolinae (Rodentia: Cricetidae) distributed in China

      Jing Li, Xin Zheng, Yansen Cai, Xiuyue Zhang, Min Yang, Bisong Yue and Jing Li

      Article first published online: 6 JUN 2014 | DOI: 10.1111/1755-0998.12279

    23. Use of genotyping by sequencing data to develop a high-throughput and multifunctional SNP panel for conservation applications in Pacific lamprey

      Jon E. Hess, Nathan R. Campbell, Margaret F. Docker, Cyndi Baker, Aaron Jackson, Ralph Lampman, Brian McIlraith, Mary L. Moser, David P. Statler, William P. Young, Andrew J. Wildbill and Shawn R. Narum

      Article first published online: 5 JUN 2014 | DOI: 10.1111/1755-0998.12283

    24. ‘Direct PCR’ optimization yields a rapid, cost-effective, nondestructive and efficient method for obtaining DNA barcodes without DNA extraction

      Wing Hing Wong, Ywee Chieh Tay, Jayanthi Puniamoorthy, Michael Balke, Peter S. Cranston and Rudolf Meier

      Article first published online: 5 JUN 2014 | DOI: 10.1111/1755-0998.12275

    25. You have full text access to this OnlineOpen article
      Estimation of linkage disequilibrium and interspecific gene flow in Ficedula flycatchers by a newly developed 50k single-nucleotide polymorphism array

      Takeshi Kawakami, Niclas Backström, Reto Burri, Arild Husby, Pall Olason, Amber M. Rice, Murielle Ålund, Anna Qvarnström and Hans Ellegren

      Article first published online: 26 MAY 2014 | DOI: 10.1111/1755-0998.12270

    26. QDD version 3.1: a user-friendly computer program for microsatellite selection and primer design revisited: experimental validation of variables determining genotyping success rate

      Emese Meglécz, Nicolas Pech, André Gilles, Vincent Dubut, Pascal Hingamp, Aurélie Trilles, Rémi Grenier and Jean-François Martin

      Article first published online: 26 MAY 2014 | DOI: 10.1111/1755-0998.12271

    27. Identification of species in the angiosperm family Apiaceae using DNA barcodes

      Jinxin Liu, Linchun Shi, Jianping Han, Geng Li, Heng Lu, Jingyi Hou, Xiaoteng Zhou, Fanyun Meng and Stephen R. Downie

      Article first published online: 14 MAY 2014 | DOI: 10.1111/1755-0998.12262

    28. Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias

      Laurence J. Clarke, Julien Soubrier, Laura S. Weyrich and Alan Cooper

      Article first published online: 14 MAY 2014 | DOI: 10.1111/1755-0998.12265

    29. Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies

      Cédric Mariac, Nora Scarcelli, Juliette Pouzadou, Adeline Barnaud, Claire Billot, Adama Faye, Ayite Kougbeadjo, Vincent Maillol, Guillaume Martin, François Sabot, Sylvain Santoni, Yves Vigouroux and Thomas L. P. Couvreur

      Article first published online: 23 APR 2014 | DOI: 10.1111/1755-0998.12258

    30. Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects barcoding accuracy of its freshwater fishes

      M. F. Geiger, F. Herder, M. T. Monaghan, V. Almada, R. Barbieri, M. Bariche, P. Berrebi, J. Bohlen, M. Casal-Lopez, G. B. Delmastro, G. P. J. Denys, A. Dettai, I. Doadrio, E. Kalogianni, H. Kärst, M. Kottelat, M. Kovačić, M. Laporte, M. Lorenzoni, Z. Marčić, M. Özuluğ, A. Perdices, S. Perea, H. Persat, S. Porcelotti, C. Puzzi, J. Robalo, R. Šanda, M. Schneider, V. Šlechtová, M. Stoumboudi, S. Walter and J. Freyhof

      Article first published online: 15 APR 2014 | DOI: 10.1111/1755-0998.12257

    31. Automated DNA-based plant identification for large-scale biodiversity assessment

      Anna Papadopoulou, Douglas Chesters, Indiana Coronado, Gissela De la Cadena, Anabela Cardoso, Jazmina C. Reyes, Jean-Michel Maes, Ricardo M. Rueda and Jesús Gómez-Zurita

      Article first published online: 12 APR 2014 | DOI: 10.1111/1755-0998.12256


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