Methods in Ecology and Evolution

Cover image for Vol. 7 Issue 7

Early View (Online Version of Record published before inclusion in an issue)

Edited By: Rob Freckleton, Bob O'Hara and Jana Vamosi

Impact Factor: 6.344

ISI Journal Citation Reports © Ranking: 2015: 8/149 (Ecology)

Online ISSN: 2041-210X

Associated Title(s): Functional Ecology, Journal of Animal Ecology, Journal of Applied Ecology, Journal of Ecology

VIEW

  1. 1 - 64
  1. Research Articles

    1. Plateau: a new method for ecologically plausible climate envelopes for species distribution modelling

      Mark J. Brewer, Robert B. O'Hara, Barbara J. Anderson and Ralf Ohlemüller

      Version of Record online: 30 JUL 2016 | DOI: 10.1111/2041-210X.12609

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      Dynamic range boxes – a robust nonparametric approach to quantify size and overlap of n-dimensional hypervolumes

      Robert R. Junker, Jonas Kuppler, Arne C. Bathke, Manuela L. Schreyer and Wolfgang Trutschnig

      Version of Record online: 28 JUL 2016 | DOI: 10.1111/2041-210X.12611

    3. Spectroscopic determination of ecologically relevant plant secondary metabolites

      John J. Couture, Aditya Singh, Kennedy F. Rubert-Nason, Shawn P. Serbin, Richard L. Lindroth and Philip A. Townsend

      Version of Record online: 23 JUL 2016 | DOI: 10.1111/2041-210X.12596

    4. Measuring the functional redundancy of biological communities: a quantitative guide

      Carlo Ricotta, Francesco de Bello, Marco Moretti, Marco Caccianiga, Bruno E.L. Cerabolini and Sandrine Pavoine

      Version of Record online: 23 JUL 2016 | DOI: 10.1111/2041-210X.12604

    5. A minimum-impact, flexible tool to study vocal communication of small animals with precise individual-level resolution

      Lisa F. Gill, Pietro B. D'Amelio, Nicolas M. Adreani, Hannes Sagunsky, Manfred C. Gahr and Andries ter Maat

      Version of Record online: 22 JUL 2016 | DOI: 10.1111/2041-210X.12610

  2. Reviews

    1. You have full text access to this OnlineOpen article
      Critical considerations for the application of environmental DNA methods to detect aquatic species

      Caren S. Goldberg, Cameron R. Turner, Kristy Deiner, Katy E. Klymus, Philip Francis Thomsen, Melanie A. Murphy, Stephen F. Spear, Anna McKee, Sara J. Oyler-McCance, Robert Scott Cornman, Matthew B. Laramie, Andrew R. Mahon, Richard F. Lance, David S. Pilliod, Katherine M. Strickler, Lisette P. Waits, Alexander K. Fremier, Teruhiko Takahara, Jelger E. Herder and Pierre Taberlet

      Version of Record online: 22 JUL 2016 | DOI: 10.1111/2041-210X.12595

  3. Applications

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      inbreedR: an R package for the analysis of inbreeding based on genetic markers

      Martin A. Stoffel, Mareike Esser, Marty Kardos, Emily Humble, Hazel Nichols, Patrice David and Joseph I. Hoffman

      Version of Record online: 21 JUL 2016 | DOI: 10.1111/2041-210X.12588

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      Rphylopars: fast multivariate phylogenetic comparative methods for missing data and within-species variation

      Eric W. Goolsby, Jorn Bruggeman and Cécile Ané

      Version of Record online: 21 JUL 2016 | DOI: 10.1111/2041-210X.12612

  4. Reviews

    1. Open Nomenclature in the biodiversity era

      Marco Sigovini, Erica Keppel and Davide Tagliapietra

      Version of Record online: 20 JUL 2016 | DOI: 10.1111/2041-210X.12594

  5. Research Articles

    1. Detecting evolutionarily significant units above the species level using the generalised mixed Yule coalescent method

      Aelys M. Humphreys, Catarina Rydin, Knud A. Jønsson, David Alsop, Leah M. Callender-Crowe and Timothy G. Barraclough

      Version of Record online: 18 JUL 2016 | DOI: 10.1111/2041-210X.12603

  6. Reviews

    1. Perspectives on the intrinsic rate of population growth

      Enric Cortés

      Version of Record online: 16 JUL 2016 | DOI: 10.1111/2041-210X.12592

  7. Applications

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      CDMetaPOP: an individual-based, eco-evolutionary model for spatially explicit simulation of landscape demogenetics

      Erin L. Landguth, Andrew Bearlin, Casey C. Day and Jason Dunham

      Version of Record online: 16 JUL 2016 | DOI: 10.1111/2041-210X.12608

  8. Research Articles

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      State-and-transition simulation models: a framework for forecasting landscape change

      Colin J. Daniel, Leonardo Frid, Benjamin M. Sleeter and Marie-Josée Fortin

      Version of Record online: 16 JUL 2016 | DOI: 10.1111/2041-210X.12597

  9. Reviews

    1. Automated content analysis: addressing the big literature challenge in ecology and evolution

      Gabriela C. Nunez-Mir, Basil V. Iannone III, Bryan C. Pijanowski, Ningning Kong and Songlin Fei

      Version of Record online: 16 JUL 2016 | DOI: 10.1111/2041-210X.12602

  10. Research Articles

    1. How does choice of statistical method to adjust counts for imperfect detection affect inferences about animal abundance?

      Christopher R. Field, Carina Gjerdrum and Chris S. Elphick

      Version of Record online: 15 JUL 2016 | DOI: 10.1111/2041-210X.12601

    2. Evaluation of statistical methods and sampling designs for the assessment of microhabitat selection based on point data

      Irene L. Gorosito, Mariano Marziali Bermúdez, Richard J. Douglass and María Busch

      Version of Record online: 15 JUL 2016 | DOI: 10.1111/2041-210X.12605

    3. Measuring the biodiversity of microbial communities by flow cytometry

      Ruben Props, Pieter Monsieurs, Mohamed Mysara, Lieven Clement and Nico Boon

      Version of Record online: 15 JUL 2016 | DOI: 10.1111/2041-210X.12607

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      Identifying the best climatic predictors in ecology and evolution

      Martijn van de Pol, Liam D. Bailey, Nina McLean, Laurie Rijsdijk, Callum R. Lawson and Lyanne Brouwer

      Version of Record online: 11 JUL 2016 | DOI: 10.1111/2041-210X.12590

  11. Applications

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      rotl: an R package to interact with the Open Tree of Life data

      François Michonneau, Joseph W. Brown and David J. Winter

      Version of Record online: 11 JUL 2016 | DOI: 10.1111/2041-210X.12593

  12. Research Articles

  13. Applications

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      camtrapR: an R package for efficient camera trap data management

      Jürgen Niedballa, Rahel Sollmann, Alexandre Courtiol and Andreas Wilting

      Version of Record online: 11 JUL 2016 | DOI: 10.1111/2041-210X.12600

  14. Research Articles

    1. Assessing the cost-efficiency of environmental DNA sampling

      Adam S. Smart, Andrew R. Weeks, Anthony R. van Rooyen, Alana Moore, Michael A. McCarthy and Reid Tingley

      Version of Record online: 6 JUL 2016 | DOI: 10.1111/2041-210X.12598

    2. A multispecies occupancy model for two or more interacting species

      Christopher T. Rota, Marco A. R. Ferreira, Roland W. Kays, Tavis D. Forrester, Elizabeth L. Kalies, William J. McShea, Arielle W. Parsons and Joshua J. Millspaugh

      Version of Record online: 29 JUN 2016 | DOI: 10.1111/2041-210X.12587

    3. Novel applications of thermocyclers for phenotyping invertebrate thermal responses

      Jacinta D. Kong, Jason K. Axford, Ary A. Hoffmann and Michael R. Kearney

      Version of Record online: 23 JUN 2016 | DOI: 10.1111/2041-210X.12589

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      The minimum founding population in dispersing organisms subject to strong Allee effects

      Devin W. Goodsman and Mark A. Lewis

      Version of Record online: 15 JUN 2016 | DOI: 10.1111/2041-210X.12573

    5. Data reliability in citizen science: learning curve and the effects of training method, volunteer background and experience on identification accuracy of insects visiting ivy flowers

      Francis L. W. Ratnieks, Felix Schrell, Rebecca C. Sheppard, Emmeline Brown, Oliver E. Bristow and Mihail Garbuzov

      Version of Record online: 30 MAY 2016 | DOI: 10.1111/2041-210X.12581

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  15. Applications

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  16. Research Articles

    1. Immunoglobulin detection in wild birds: effectiveness of three secondary anti-avian IgY antibodies in direct ELISAs in 41 avian species

      Carol A. Fassbinder-Orth, Travis E. Wilcoxen, Tiffany Tran, Raoul K. Boughton, Jeanne M. Fair, Erik K. Hofmeister, Jennifer L. Grindstaff and Jen C. Owen

      Version of Record online: 28 MAY 2016 | DOI: 10.1111/2041-210X.12583

  17. Applications

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      moveHMM: an R package for the statistical modelling of animal movement data using hidden Markov models

      Théo Michelot, Roland Langrock and Toby A. Patterson

      Version of Record online: 28 MAY 2016 | DOI: 10.1111/2041-210X.12578

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      Terrestrial Precipitation Analysis (TPA): A resource for characterizing long-term precipitation regimes and extremes

      Nathan P. Lemoine, Justin Sheffield, Jeffrey S. Dukes, Alan K. Knapp and Melinda D. Smith

      Version of Record online: 26 MAY 2016 | DOI: 10.1111/2041-210X.12582

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      trapper: an open source web-based application to manage camera trapping projects

      Jakub W. Bubnicki, Marcin Churski and Dries P. J. Kuijper

      Version of Record online: 24 MAY 2016 | DOI: 10.1111/2041-210X.12571

  18. Research Articles

    1. Habitat Condition Assessment System: a new way to assess the condition of natural habitats for terrestrial biodiversity across whole regions using remote sensing data

      Tom D. Harwood, Randall J. Donohue, Kristen J. Williams, Simon Ferrier, Tim R. McVicar, Graeme Newell and Matt White

      Version of Record online: 18 MAY 2016 | DOI: 10.1111/2041-210X.12579

  19. Applications

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      Tuning Geometric Morphometrics: an r tool to reduce information loss caused by surface smoothing

      Antonio Profico, Alessio Veneziano, Alessandro Lanteri, Paolo Piras, Gabriele Sansalone and Giorgio Manzi

      Version of Record online: 18 MAY 2016 | DOI: 10.1111/2041-210X.12576

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      codyn: An r package of community dynamics metrics

      Lauren M. Hallett, Sydney K. Jones, A. Andrew M. MacDonald, Matthew B. Jones, Dan F. B. Flynn, Julie Ripplinger, Peter Slaughter, Corinna Gries and Scott L. Collins

      Version of Record online: 18 MAY 2016 | DOI: 10.1111/2041-210X.12569

  20. Erratum

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      Erratum

      Version of Record online: 17 MAY 2016 | DOI: 10.1111/2041-210X.12585

      This article corrects:
  21. Research Articles

    1. You have full text access to this OnlineOpen article
    2. You have full text access to this OnlineOpen article
      The ecologist's field guide to sequence-based identification of biodiversity

      Simon Creer, Kristy Deiner, Serita Frey, Dorota Porazinska, Pierre Taberlet, W. Kelley Thomas, Caitlin Potter and Holly M. Bik

      Version of Record online: 14 MAY 2016 | DOI: 10.1111/2041-210X.12574

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      Experimentally derived likelihoods for light-based geolocation

      Marinelle Basson, Mark V. Bravington, Jason R. Hartog and Toby A. Patterson

      Version of Record online: 13 MAY 2016 | DOI: 10.1111/2041-210X.12555

    4. Quantification of population sizes of large herbivores and their long-term functional role in ecosystems using dung fungal spores

      Ambroise G. Baker, Perry Cornelissen, Shonil A. Bhagwat, Fransciscus W. M. Vera and Katherine J. Willis

      Version of Record online: 12 MAY 2016 | DOI: 10.1111/2041-210X.12580

    5. Just Google it: assessing the use of Google Images to describe geographical variation in visible traits of organisms

      Gabriella R. M. Leighton, Pierre S. Hugo, Alexandre Roulin and Arjun Amar

      Version of Record online: 11 MAY 2016 | DOI: 10.1111/2041-210X.12562

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      How reliably can we infer diversity-dependent diversification from phylogenies?

      Rampal S. Etienne, Alex L. Pigot and Albert B. Phillimore

      Version of Record online: 5 MAY 2016 | DOI: 10.1111/2041-210X.12565

  22. Applications

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      ctmm: an r package for analyzing animal relocation data as a continuous-time stochastic process

      Justin M. Calabrese, Chris H. Fleming and Eliezer Gurarie

      Version of Record online: 5 MAY 2016 | DOI: 10.1111/2041-210X.12559

  23. Research Articles

    1. Model-based inference for estimating shifts in species distribution, area occupied and centre of gravity

      James T. Thorson, Malin L. Pinsky and Eric J. Ward

      Version of Record online: 29 APR 2016 | DOI: 10.1111/2041-210X.12567

    2. Integral Projection Models for host–parasite systems with an application to amphibian chytrid fungus

      Mark Q. Wilber, Kate E. Langwig, Auston Marm Kilpatrick, Hamish I. McCallum and Cheryl J. Briggs

      Version of Record online: 28 APR 2016 | DOI: 10.1111/2041-210X.12561

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      Estimating abundance in the presence of species uncertainty

      Thierry Chambert, Blake R. Hossack, LeeAnn Fishback and Jon M. Davenport

      Version of Record online: 22 APR 2016 | DOI: 10.1111/2041-210X.12570

    4. The Lambert W function in ecological and evolutionary models

      Jussi Lehtonen

      Version of Record online: 22 APR 2016 | DOI: 10.1111/2041-210X.12568

    5. Intrinsic heterogeneity in detection probability and its effect on N-mixture models

      Joseph A. Veech, James R. Ott and Jeff R. Troy

      Version of Record online: 22 APR 2016 | DOI: 10.1111/2041-210X.12566

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      Optimizing ecological survey effort over space and time

      Alana L. Moore and Michael A. McCarthy

      Version of Record online: 22 APR 2016 | DOI: 10.1111/2041-210X.12564

  24. Applications

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      A simple and effective method to collect leaves and seeds from tall trees

      Kara N. Youngentob, Christina Zdenek and Eva van Gorsel

      Version of Record online: 19 APR 2016 | DOI: 10.1111/2041-210X.12554

  25. Research Articles

    1. Validating the use of unique trait combinations for measuring multivariate functional richness

      Alexander C. Keyel and Kerstin Wiegand

      Version of Record online: 14 APR 2016 | DOI: 10.1111/2041-210X.12558

    2. Acoustic identification of Mexican bats based on taxonomic and ecological constraints on call design

      Veronica Zamora-Gutierrez, Celia Lopez-Gonzalez, M. Cristina MacSwiney Gonzalez, Brock Fenton, Gareth Jones, Elisabeth K. V. Kalko, Sebastien J. Puechmaille, Vassilios Stathopoulos and Kate E. Jones

      Version of Record online: 14 APR 2016 | DOI: 10.1111/2041-210X.12556

  26. Corrigendum

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      Corrigendum

      Version of Record online: 9 APR 2016 | DOI: 10.1111/2041-210X.12560

      This article corrects:
  27. Forum

    1. You have full text access to this OnlineOpen article
      Three points to consider when choosing a LM or GLM test for count data

      David I. Warton, Mitchell Lyons, Jakub Stoklosa and Anthony R. Ives

      Version of Record online: 8 APR 2016 | DOI: 10.1111/2041-210X.12552

  28. Research Articles

    1. Metabarcoding and mitochondrial metagenomics of endogean arthropods to unveil the mesofauna of the soil

      Paula Arribas, Carmelo Andújar, Kevin Hopkins, Matthew Shepherd and Alfried P. Vogler

      Version of Record online: 7 APR 2016 | DOI: 10.1111/2041-210X.12557

  29. Applications

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      RClone: a package to identify MultiLocus Clonal Lineages and handle clonal data sets in r.

      Diane Bailleul, Solenn Stoeckel and Sophie Arnaud-Haond

      Version of Record online: 16 MAR 2016 | DOI: 10.1111/2041-210X.12550

  30. Reviews

    1. Dissecting phylogenetic fuzzy weighting: theory and application in metacommunity phylogenetics

      Leandro D. S. Duarte, Vanderlei J. Debastiani, André V. L. Freitas and Valério D. Pillar

      Version of Record online: 10 MAR 2016 | DOI: 10.1111/2041-210X.12547

  31. Applications

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      Plant-O-Matic: a dynamic and mobile guide to all plants of the Americas

      Gregory R. Goldsmith, Naia Morueta-Holme, Brody Sandel, Eric D. Fitz, Samuel D. Fitz, Brad Boyle, Nathan Casler, Kristine Engemann, Peter M. Jørgensen, Nathan J. B. Kraft, Brian McGill, Robert K. Peet, William H. Piel, Nick Spencer, Jens-Christian Svenning, Barbara M. Thiers, Cyrille Violle, Susan K. Wiser and Brian J. Enquist

      Version of Record online: 10 MAR 2016 | DOI: 10.1111/2041-210X.12548

  32. Research Articles

    1. Trace metal accumulation as complementary dietary information for the isotopic analysis of complex food webs

      David X. Soto, Josep Benito, Esperança Gacia, Emili García-Berthou and Jordi Catalan

      Version of Record online: 7 MAR 2016 | DOI: 10.1111/2041-210X.12546

    2. Uncertainty in biological monitoring: a framework for data collection and analysis to account for multiple sources of sampling bias

      Viviana Ruiz-Gutierrez, Mevin B. Hooten and Evan H. Campbell Grant

      Version of Record online: 25 FEB 2016 | DOI: 10.1111/2041-210X.12542

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