Biopolymers

Number of times cited: 100

• Basanth S. Kalanoor, Maria Ronen, Ziv Oren, Doron Gerber and Yaakov R. Tischler, New Method to Study the Vibrational Modes of Biomolecules in the Terahertz Range Based on a Single-Stage Raman Spectrometer, ACS Omega, 2, 3, (1232), (2017).
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• Shigeki Yamamoto, Mai Miyada, Harumi Sato, Hiromichi Hoshina and Yukihiro Ozaki, Low-Frequency Vibrational Modes of Poly(glycolic acid) and Thermal Expansion of Crystal Lattice Assigned On the Basis of DFT-Spectral Simulation Aided with a Fragment Method, The Journal of Physical Chemistry B, 10.1021/acs.jpcb.6b11304, 121, 5, (1128-1138), (2017).
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• Alberto Carpinteri, Giuseppe Lacidogna, Gianfranco Piana and Andrea Bassani, Terahertz mechanical vibrations in lysozyme: Raman spectroscopy vs modal analysis, Journal of Molecular Structure, 10.1016/j.molstruc.2017.02.099, 1139, (222-230), (2017).
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• Adrien Nicolaï, Patrice Delarue and Patrick Senet, Theoretical Insights into Sub-Terahertz Acoustic Vibrations of Proteins Measured in Single-Molecule Experiments, The Journal of Physical Chemistry Letters, 7, 24, (5128), (2016).
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• Adrien Nicolaï, Fatima Barakat, Patrice Delarue and Patrick Senet, Fingerprints of Conformational States of Human Hsp70 at Sub-THz Frequencies, ACS Omega, 1, 6, (1067), (2016).
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• Jordane Preto, Classical investigation of long-range coherence in biological systems, Chaos: An Interdisciplinary Journal of Nonlinear Science, 26, 12, (123116), (2016).
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• Jordane Preto, Marco Pettini and Jack A. Tuszynski, Possible role of electrodynamic interactions in long-distance biomolecular recognition, Physical Review E, 91, 5, (2015).
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• Ilaria Nardecchia, Lionel Spinelli, Jordane Preto, Matteo Gori, Elena Floriani, Sebastien Jaeger, Pierre Ferrier and Marco Pettini, Experimental detection of long-distance interactions between biomolecules through their diffusion behavior: Numerical study, Physical Review E, 90, 2, (2014).
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• Alexander Shkurinov, Terahertz Spectroscopic Insight into the Structure–Function Relation in Protein Molecules, Terahertz Biomedical Science and Technology, 10.1201/b17060-13, (173-194), (2014).
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• Shigeki Yamamoto, Yusuke Morisawa, Harumi Sato, Hiromichi Hoshina and Yukihiro Ozaki, Quantum Mechanical Interpretation of Intermolecular Vibrational Modes of Crystalline Poly-( R )-3-Hydroxybutyrate Observed in Low-Frequency Raman and Terahertz Spectra , The Journal of Physical Chemistry B, 10.1021/jp309704k, 117, 7, (2180-2187), (2013).
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• Wojciech Pulawski, Slawomir Filipek, Anna Zwolinska, Aleksander Debinski, Krystiana Krzysko, Ramón Garduño-Juárez, Sowmya Viswanathan and Venkatesan Renugopalakrishnan, Low-temperature molecular dynamics simulations of horse heart cytochrome c and comparison with inelastic neutron scattering data, European Biophysics Journal, 10.1007/s00249-012-0874-9, 42, 4, (291-300), (2012).
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• Peter H. Siegel, Terahertz Pioneer: Fritz Keilmann - "RF Biophysics: From strong field to near field", IEEE Transactions on Terahertz Science and Technology, 3, 5, (506), (2013).
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• Alain Hédoux, Jeong‐Ah Seo, Yannick Guinet and Laurent Paccou, Analysis of cold denaturation mechanism of β‐lactoglobulin and comparison with thermal denaturation from Raman spectroscopy investigations, Journal of Raman Spectroscopy, 43, 1, (16-23), (2011).
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• Yutaka Nagasawa, Kenji Fujita, Tetsuro Katayama, Yukihide Ishibashi, Hiroshi Miyasaka, Teruhiro Takabe, Satoshi Nagao and Shun Hirota, Coherent dynamics and ultrafast excited state relaxation of blue copper protein; plastocyanin, Physical Chemistry Chemical Physics, 12, 23, (6067), (2010).
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• K. N. Woods, Solvent-induced backbone fluctuations and the collective librational dynamics of lysozyme studied by terahertz spectroscopy, Physical Review E, 10.1103/PhysRevE.81.031915, 81, 3, (2010).
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• Masahiko Tani, Toshiyuki Koizumi, Hisashi Sumikura, Mariko Yamaguchi, Kohji Yamamoto and Masanori Hangyo, Time-Domain Coherent Anti-Stokes Raman Scattering Signal Detection for Terahertz Vibrational Spectroscopy Using Chirped Femtosecond Pulses, Applied Physics Express, 3, 7, (072401), (2010).
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• S. G. Lushnikov, A. V. Svanidze, S. N. Gvasaliya, G. Torok, L. Rosta and I. L. Sashin, Fractal properties of lysozyme: A neutron scattering study, Physical Review E, 79, 3, (2009).
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• A. Lerbret, F. Affouard, P. Bordat, A. Hédoux, Y. Guinet and M. Descamps, Low-frequency vibrational properties of lysozyme in sugar aqueous solutions: A Raman scattering and molecular dynamics simulation study, The Journal of Chemical Physics, 131, 24, (245103), (2009).
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• K.M. ElSawy, A. Taormina, R. Twarock and L. Vaughan, Dynamical implications of Viral Tiling Theory, Journal of Theoretical Biology, 252, 2, (357), (2008).
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• N. N. Brandt, A. Yu. Chikishev, V. I. Dolgovskii, A. V. Kargovskii and S. I. Lebedenko, Low-frequency vibrational motions in proteins: Physical mechanisms and effect on functioning, The European Physical Journal B, 65, 3, (419), (2008).
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• A. V. Svanidze, S. G. Lushnikov, I. L. Sashin and S. N. Gvasaliya, Study on the influence of isotope exchange of hydrogen with deuterium on the vibrational spectrum of lysozyme by inelastic neutron scattering, Crystallography Reports, 52, 5, (838), (2007).
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• B. Capon, Reactions of Aldehydes and Ketones and Their Derivatives, Organic Reaction Mechanisms, (1-27), (2007).
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• A. V. Svanidze, I. L. Sashin, S. G. Lushnikov, S. N. Gvasaliya, K. K. Turoverov, I. M. Kuznetsova and Seiji Kojima, Inelastic Incoherent Neutron Scattering in Some Proteins, Ferroelectrics, 348, 1, (154), (2007).
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• , References, Advances in Chemical Physics, (233-249), (2007).
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• N. N. Brandt, A. Yu. Chikishev, V. I. Dolgovskii and S. I. Lebedenko, Laser Raman spectroscopy of the effect of solvent on the low-frequency oscillations of organic molecules, Laser Physics, 17, 9, (1133), (2007).
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• A. F. Bunkin, A. U. Chikishev, A. P. Gorchakov, A. A. Nurmatov and S. M. Pershin, Four‐photon Rayleigh‐wing spectroscopy of α‐chymotrypsin protein in water, Journal of Raman Spectroscopy, 37, 6, (689-692), (2006).
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• VASILY MITROFANOV, YURY ROMANOVSKY and ALEXEY NETREBKO, ON THE DAMPING OF THE FLUCTUATIONS OF ATOMIC GROUPS IN WATER ENVIRONMENT, Fluctuation and Noise Letters, 06, 02, (L133), (2006).
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• A.F. Bunkin, A.A. Nurmatov and S.M. Pershin, Coherent four-photon spectroscopy of low-frequency molecular librations in a liquid, Uspekhi Fizicheskih Nauk, 176, 8, (883), (2006).
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• M. Ivanda, A. Hohl, M. Montagna, G. Mariotto, M. Ferrari, Z. Crnjak Orel, A. Turković and K. Furić, Raman scattering of acoustical modes of silicon nanoparticles embedded in silica matrix, Journal of Raman Spectroscopy, 37, 1‐3, (161-165), (2006).
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• Amanda L. Jenkins, Richard A. Larsen and Timothy B. Williams, Characterization of amino acids using Raman spectroscopy, Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 61, 7, (1585), (2005).
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• S. G. Lushnikov, A. V. Svanidze and I. L. Sashin, Vibrational density of states of hen egg white lysozyme, Journal of Experimental and Theoretical Physics Letters, 82, 1, (30), (2005).
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2005 7th International Conference Transparent Optical Networks, 2005. Barcelona, Catlonia, Spain July 3-7, 2005 Proceedings of 2005 7th International Conference Transparent Optical Networks, 2005. IEEE , (2005). 2 0-7803-9236-1 M. Ivanda, A. Hohl, K. Furic, A. Turkovic, U.V. Desnica, M. Buljan, P. Biljanovic, Z.C. Orel, M. Montagna and M. Ferarri Raman scattering technique in characterisation of glasses containing silicon nanoparticles for optoelectronics 245 249 , 10.1109/ICTON.2005.1506144 http://ieeexplore.ieee.org/document/1506144/
• Anna Rita Bizzarri, Neutron scattering and molecular dynamics simulation: a conjugate approach to investigate the dynamics of electron transfer proteins, Journal of Physics: Condensed Matter, 10.1088/0953-8984/16/6/R01, 16, 6, (R83-R110), (2004).
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• A. Cvetkovic, A. J. J. Straathof, D. N. Hanlon, S. van der Zwaag, R. Krishna and L. A. M. van der Wielen, Quantifying anisotropic solute transport in protein crystals using 3‐D laser scanning confocal microscopy visualization, Biotechnology and Bioengineering, 86, 4, (389-398), (2004).
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• Juan Hernández-Rosas, Michel Picquart, Emmanuel Haro-Poniatowski, Makoto Kanehisa, Michel Jouanne and Jean François Morhange, Elastic vibrations of spheroidal nanometric particles, Journal of Physics: Condensed Matter, 15, 44, (7481), (2003).
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• Joel D Eaves, Christopher J Fecko, Anna L Stevens, Paul Peng and Andrei Tokmakoff, Polarization-selective femtosecond Raman spectroscopy of low-frequency motions in hydrated protein films, Chemical Physics Letters, 376, 1-2, (20), (2003).
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• Gerard Giraud, Jan Karolin and Klaas Wynne, Low-Frequency Modes of Peptides and Globular Proteins in Solution Observed by Ultrafast OHD-RIKES Spectroscopy, Biophysical Journal, 85, 3, (1903), (2003).
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• Tsuneyoshi Nakayama, Boson peak and terahertz frequency dynamics of vitreous silica, Reports on Progress in Physics, 65, 8, (1195), (2002).
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• Kohji Yamamoto, Keisuke Tominaga, Hiroaki Sasakawa, Atsuo Tamura, Hidetoshi Murakami, Hideyuki Ohtake and Nobuhiko Sarukura, Far-Infrared Absorption Measurements of Polypeptides and Cytochromecby THz Radiation, Bulletin of the Chemical Society of Japan, 75, 5, (1083), (2002).
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• Mounir Tarek and Douglas J. Tobias, Effects of solvent damping on side chain and backbone contributions to the protein boson peak, The Journal of Chemical Physics, 115, 3, (1607), (2001).
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• M. Picquart, E. Haro‐Poniatowski, J. F. Morhange, M. Jouanne and M. Kanehisa, Low frequency vibrations and structural characterization of a murine IgG2a monoclonal antibody studied by Raman and IR spectroscopies, Biopolymers, 53, 4, (342-349), (2000).
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• Alessandro Paciaroni, Anna Rita Bizzarri and Salvatore Cannistraro, Low frequency vibrational anomalies in hydrated copper azurin: A neutron scattering and MD simulation study, Journal of Molecular Liquids, 84, 1, (3), (2000).
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• Anna Rita Bizzarri, Alessandro Paciaroni and Salvatore Cannistraro, Glasslike dynamical behavior of the plastocyanin hydration water, Physical Review E, 62, 3, (3991), (2000).
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• H. Leyser, W. Doster and M. Diehl, Far-Infrared Emission by Boson Peak Vibrations in a Globular Protein, Physical Review Letters, 82, 14, (2987), (1999).
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• Simone Melchionna and Alessandro Desideri, Origin of the low-frequency modes of globular proteins, Physical Review E, 60, 4, (4664), (1999).
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• Alessandro Paciaroni, Anna Rita Bizzarri and Salvatore Cannistraro, Neutron scattering evidence of a boson peak in protein hydration water, Physical Review E, 60, 3, (R2476), (1999).
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• M Kataoka, H Kamikubo, J Yunoki, F Tokunaga, T Kanaya, Y Izumi and K Shibata, Low energy dynamics of globular proteins studied by inelastic neutron scattering, Journal of Physics and Chemistry of Solids, 60, 8-9, (1285), (1999).
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• Hisako Urabe, Yoko Sugawara, Mitsuo Ataka and Allan Rupprecht, Low-Frequency Raman Spectra of Lysozyme Crystals and Oriented DNA Films: Dynamics of Crystal Water, Biophysical Journal, 74, 3, (1533), (1998).
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• P. Etchegoin, Glassylike low-frequency dynamics of globular proteins, Physical Review E, 58, 1, (845), (1998).
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• Lev I Maklakov and Svetlana V Aksakova, Low-frequency vibrational spectroscopy of amides and urethanes, Russian Chemical Reviews, 66, 5, (375), (1997).
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• Jean‐françois Gibrat, Jean Garnier and Nobuhiro Gō, Normal mode analysis of oligomeric proteins: Reduction of the memory requirement by consideration of rigid geometry and molecular symmetry, Journal of Computational Chemistry, 15, 8, (820-837), (2004).
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• Wen-Ge Han auCun-da Wang, The vibrational normal modes of β-barrels in an IgG antibody molecule, Biophysical Chemistry, 44, 1, (29), (1992).
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• Philippe Derreumaux and Géarard Vergoten, Effect of urey–bradley–shimanouchi force field on the harmonic dynamics of proteins, "Proteins: Structure, Function, and Bioinformatics", 11, 2, (120-132), (2004).
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• Kuo‐Chen Chou, The biological functions of low‐frequency vibrations (phonons). VI. A possible dynamic mechanism of allosteric transition in antibody molecules, Biopolymers, 26, 2, (285-295), (2004).
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