Volume 58, Issue 2

Survival Analysis with Time‐Varying Regression Effects Using a Tree‐Based Approach

Ronghui Xu

Department of Biostatistics, Harvard School of Public Health and Dana‐Farber Cancer Institute, Boston, Massachusetts 02115, U.S.A. email:rxu@jimmy.harvard.edu

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Sudeshna Adak

Bioinformatics Group, IBM India Research Lab, Indian Institute of Technology, New Delhi, India 110 016 email:asudeshnain.ibm.com

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First published: 21 May 2004
Citations: 15

Abstract

Summary. Nonproportional hazards often arise in survival analysis, as is evident in the data from the International Non‐Hodgkin's Lymphoma Prognostic Factors Project. A tree‐based method to handle such survival data is developed for the assessment and estimation of time‐dependent regression effects under a Cox‐type model. The tree method approximates the time‐varying regression effects as piecewise constants and is designed to estimate change points in the regression parameters. A fast algorithm that relies on maximized score statistics is used in recursive segmentation of the time axis. Following the segmentation, a pruning algorithm with optimal properties similar to those of classification and regression trees (CART) is used to determine a sparse segmentation. Bootstrap resampling is used in correcting for overoptimism due to split point optimization. The piecewise constant model is often more suitable for clinical interpretation of the regression parameters than the more flexible spline models. The utility of the algorithm is shown on the lymphoma data, where we further develop the published International Risk Index into a time‐varying risk index for non‐Hodgkin's lymphoma.

Number of times cited according to CrossRef: 15

  • Tree-based modeling of time-varying coefficients in discrete time-to-event models, Lifetime Data Analysis, 10.1007/s10985-019-09489-7, (2019).
  • Model‐robust inference for continuous threshold regression models, Biometrics, 10.1111/biom.12623, 73, 2, (452-462), (2016).
  • A special case of reduced rank models for identification and modelling of time varying effects in survival analysis, Statistics in Medicine, 10.1002/sim.7088, 35, 28, (5135-5148), (2016).
  • Change point testing in logistic regression models with interaction term, Statistics in Medicine, 10.1002/sim.6419, 34, 9, (1483-1494), (2015).
  • Computational Intelligence in Survival Analysis, Encyclopedia of Business Analytics and Optimization, 10.4018/978-1-4666-5202-6, (491-501), (2014).
  • Assessing the effect of vaccine on spontaneous abortion using time‐dependent covariates Cox models, Pharmacoepidemiology and Drug Safety, 10.1002/pds.3301, 21, 8, (844-850), (2012).
  • Discrete-time survival trees and forests with time-varying covariates, Statistical Modelling: An International Journal, 10.1177/1471082X1001100503, 11, 5, (429-446), (2011).
  • A flexible approach to the crossing hazards problem, Statistics in Medicine, 10.1002/sim.3959, 29, 18, (1947-1957), (2010).
  • Stacked Laplace-EM algorithm for duration models with time-varying and random effects, Computational Statistics & Data Analysis, 10.1016/j.csda.2007.08.010, 52, 5, (2514-2528), (2008).
  • Non‐parametric estimation for baseline hazards function and covariate effects with time‐dependent covariates, Statistics in Medicine, 10.1002/sim.2574, 26, 4, (857-868), (2006).
  • Empirical and kernel estimation of covariate distribution conditional on survival time, Computational Statistics & Data Analysis, 10.1016/j.csda.2005.08.002, 50, 12, (3629-3643), (2006).
  • Prognostic variables and prognostic groups for malignant melanoma. The information from Cox and Classification And Regression Trees analysis: an Italian population-based study, Melanoma Research, 10.1097/01.cmr.0000222602.80803.e1, 16, 5, (429-433), (2006).
  • Oblique decision trees for spatial pattern detection: optimal algorithm and application to malaria risk, BMC Medical Research Methodology, 10.1186/1471-2288-5-22, 5, 1, (2005).
  • Psychogenic tremor disorders identified using tree‐based statistical algorithms and quantitative tremor analysis, Movement Disorders, 10.1002/mds.20634, 20, 12, (1543-1549), (2005).
  • Breast Cancer Prognosis Using Survival Forests, Parametric and Semiparametric Models with Applications to Reliability, Survival Analysis, and Quality of Life, 10.1007/978-0-8176-8206-4_24, (385-398), (2004).

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