Volume 11, Issue 9

On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm

Markus Reichstein

Department of Forest Science and Environment, University of Tuscia, 01100 Viterbo, Italy,

Potsdam Institute for Climate Impact Research, Telgrafenberg C4, 14473 Potsdam, Germany,

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Eva Falge

Department of Plant Ecology, University of Bayreuth, D‐95440 Bayreuth, Germany,

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Dennis Baldocchi

Department of Environmental Science, Policy and Management, Ecosystem Science Division, University of California, 151 Hilgard Hall #3110, Berkeley, CA 94720‐3110, USA,

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Dario Papale

Department of Forest Science and Environment, University of Tuscia, 01100 Viterbo, Italy,

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Marc Aubinet

Unité de Physique, Faculté des Sciences Agronomiques de Gembloux, B‐50 30 Gembloux, Belgium,

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Paul Berbigier

INRA–EPHYSE, BP 81, F33883 Villenave d'Ornon Cedex, France,

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Christian Bernhofer

Technische Universität Dresden, IHM‐Meteorologie, Pienner Strasse 9, 01737 Tharandt, Germany,

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Nina Buchmann

Max Planck Institute for Biogeochemistry, PO Box 100164, 07701 Jena, Germany,

Institute of Plant Sciences, ETH Zürich, Universitätsstrasse 2, 8092 Zürich, Switzerland,

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Tagir Gilmanov

Department of Biology/Microbiology AgH 310, Box 2207B South Dakota State University Brookings, SD 57007‐2142, USA,

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André Granier

INRA, Unité d'Ecophysiologie Forestière, F‐54280 Champenoux, France,

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Thomas Grünwald

Technische Universität Dresden, IHM‐Meteorologie, Pienner Strasse 9, 01737 Tharandt, Germany,

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Katka Havránková

Laboratory of Ecological Physiology of Forest Trees, Institute of Landscape Ecology, Academy of Sciences of the Czech Republic, Porici 3B, Brno 603 00, Czech Republic,

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Hannu Ilvesniemi

Finnish Forest Research Institute, Jokiniemenkuja 1, FIN‐01300 Vantaa, Finland,

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Dalibor Janous

Laboratory of Ecological Physiology of Forest Trees, Institute of Landscape Ecology, Academy of Sciences of the Czech Republic, Porici 3B, Brno 603 00, Czech Republic,

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Alexander Knohl

Max Planck Institute for Biogeochemistry, PO Box 100164, 07701 Jena, Germany,

Department of Environmental Science, Policy and Management, Ecosystem Science Division, University of California, 151 Hilgard Hall #3110, Berkeley, CA 94720‐3110, USA,

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Tuomas Laurila

Finnish Meteorological Institute, PO Box 503, FIN‐00101 Helsinki, Finland,

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Annalea Lohila

Finnish Meteorological Institute, PO Box 503, FIN‐00101 Helsinki, Finland,

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Denis Loustau

INRA‐Ecophysiologie, Domaine de l'Hermitage‐Pierroton, 69, route d'Arcachon, 33610 Cestas, France,

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Giorgio Matteucci

JRC, Institute for Environment and Sustainability, Via Enrico Fermi, T.P. 051, 21020 Ispra (VA), Italy,

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Tilden Meyers

NOAA/Atmospheric Turbulence and Diffusion, PO Box 2456 Oak Ridge, TN 37830, USA,

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Franco Miglietta

IBIMET, P.le delle Cascine, 18, 50144 Firenze, Italy,

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Jean‐Marc Ourcival

DREAM Unit, Centre d'Ecologie Fonctionelle et Evolutive, CNRS, 1919 route de Mende, Montpellier, France,

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Jukka Pumpanen

Department of Forest Ecology, PO Box 27, University of Helsinki, FIN‐00014 Helsinki, Finland,

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Serge Rambal

DREAM Unit, Centre d'Ecologie Fonctionelle et Evolutive, CNRS, 1919 route de Mende, Montpellier, France,

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Eyal Rotenberg

Department of Environmental Sciences and Energy Research, Weizmann Institute of Science, PO Box 26, Rehovot 76100, Israel,

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Maria Sanz

CEAM, Parque Tecnológico, c/Charles H. Darwin 14, 46980 Paterna (Valencia), Spain,

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John Tenhunen

Department of Plant Ecology, University of Bayreuth, D‐95440 Bayreuth, Germany,

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Günther Seufert

JRC, Institute for Environment and Sustainability, Via Enrico Fermi, T.P. 051, 21020 Ispra (VA), Italy,

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Francesco Vaccari

IBIMET, P.le delle Cascine, 18, 50144 Firenze, Italy,

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Timo Vesala

Department of Physical Sciences, University of Helsinki, FIN‐00014 Helsinki, Finland

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Dan Yakir

Department of Environmental Sciences and Energy Research, Weizmann Institute of Science, PO Box 26, Rehovot 76100, Israel,

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Riccardo Valentini

Department of Forest Science and Environment, University of Tuscia, 01100 Viterbo, Italy,

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First published: 25 July 2005
Citations: 1,654
Markus Reichstein, Department of Forest Science and Environment, University of Tuscia, 01100 Viterbo, Italy, fax +39 0761 357389, e‐mail: reichstein@unitus.it

Abstract

This paper discusses the advantages and disadvantages of the different methods that separate net ecosystem exchange (NEE) into its major components, gross ecosystem carbon uptake (GEP) and ecosystem respiration (Reco). In particular, we analyse the effect of the extrapolation of night‐time values of ecosystem respiration into the daytime; this is usually done with a temperature response function that is derived from long‐term data sets. For this analysis, we used 16 one‐year‐long data sets of carbon dioxide exchange measurements from European and US‐American eddy covariance networks. These sites span from the boreal to Mediterranean climates, and include deciduous and evergreen forest, scrubland and crop ecosystems.

We show that the temperature sensitivity of Reco, derived from long‐term (annual) data sets, does not reflect the short‐term temperature sensitivity that is effective when extrapolating from night‐ to daytime. Specifically, in summer active ecosystems the long‐term temperature sensitivity exceeds the short‐term sensitivity. Thus, in those ecosystems, the application of a long‐term temperature sensitivity to the extrapolation of respiration from night to day leads to a systematic overestimation of ecosystem respiration from half‐hourly to annual time‐scales, which can reach >25% for an annual budget and which consequently affects estimates of GEP. Conversely, in summer passive (Mediterranean) ecosystems, the long‐term temperature sensitivity is lower than the short‐term temperature sensitivity resulting in underestimation of annual sums of respiration.

We introduce a new generic algorithm that derives a short‐term temperature sensitivity of Reco from eddy covariance data that applies this to the extrapolation from night‐ to daytime, and that further performs a filling of data gaps that exploits both, the covariance between fluxes and meteorological drivers and the temporal structure of the fluxes. While this algorithm should give less biased estimates of GEP and Reco, we discuss the remaining biases and recommend that eddy covariance measurements are still backed by ancillary flux measurements that can reduce the uncertainties inherent in the eddy covariance data.

Number of times cited according to CrossRef: 1654

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