A study of a single variant allele (rs1426654) of the pigmentation‐related gene SLC24A5 in Greek subjects
Abstract
Abstract: The SLC24A5 gene, the human orthologue of the zebrafish golden gene, has been shown to play a key role in human pigmentation. In this study, we investigate the prevalence of the variant allele rs1426654 in a selected sample of Greek subjects. Allele‐specific polymerase chain reaction was performed in peripheral blood samples from 158 attendants of a dermatology outpatient service. The results were correlated with pigmentary traits and MC1R genotype. The vast majority of subjects (99%) were homozygous for the Thr111 allele. Only two subjects from the control group (1.26%) were heterozygous for the alanine and threonine allele. Both of these Thr111/Ala111 heterozygotes carried a single polymorphism of MC1R (one with the V92M variant and another with the V60L variant). Following reports of the rs1426654 polymorphism reaching fixation in the European population, our study of Greek subjects showed a prevalence of the Thr111 allele, even among subjects with darker skin pigmentation or phototype.
Number of times cited: 6
- Felícia de Araújo Lima, Fernanda de Toledo Gonçalves and Cintia Fridman, SLC24A5 and ASIP as phenotypic predictors in Brazilian population for forensic purposes, Legal Medicine, 17, 4, (261), (2015).
- Paulo Dario, Helena Mouriño, Ana Rita Oliveira, Isabel Lucas, Teresa Ribeiro, Maria João Porto, Jorge Costa Santos, Deodália Dias and Francisco Corte Real, Assessment of IrisPlex-based multiplex for eye and skin color prediction with application to a Portuguese population, International Journal of Legal Medicine, 129, 6, (1191), (2015).
- Jens Söchtig, Chris Phillips, Olalla Maroñas, Antonio Gómez-Tato, Raquel Cruz, Jose Alvarez-Dios, María-Ángeles Casares de Cal, Yarimar Ruiz, Kristian Reich, Manuel Fondevila, Ángel Carracedo and María V. Lareu, Exploration of SNP variants affecting hair colour prediction in Europeans, International Journal of Legal Medicine, 10.1007/s00414-015-1226-y, 129, 5, (963-975), (2015).
- Fan Liu, Bei Wen and Manfred Kayser, Colorful DNA polymorphisms in humans, Seminars in Cell & Developmental Biology, 10.1016/j.semcdb.2013.03.013, 24, 6-7, (562-575), (2013).
- Sara Raimondi, Sara Gandini, Maria Concetta Fargnoli, Vincenzo Bagnardi, Patrick Maisonneuve, Claudia Specchia, Rajiv Kumar, Eduardo Nagore, Jiali Han, Johan Hansson, Peter A Kanetsky, Paola Ghiorzo, Nelleke A Gruis, Terry Dwyer, Leigh Blizzard, Ricardo Fernandez-de-Misa, Wojciech Branicki, Tadeusz Debniak, Niels Morling, Maria Teresa Landi, Giuseppe Palmieri, Gloria Ribas, Alexander Stratigos, Lynn Cornelius, Tomonori Motokawa, Sumiko Anno, Per Helsing, Terence H Wong, Philippe Autier, José C García-Borrón, Julian Little, Julia Newton-Bishop, Francesco Sera, Fan Liu, Manfred Kayser and Tamar Nijsten, Melanocortin-1 receptor, skin cancer and phenotypic characteristics (M-SKIP) project: study design and methods for pooling results of genetic epidemiological studies, BMC Medical Research Methodology, 10.1186/1471-2288-12-116, 12, 1, (2012).
- Dominique Scherer and Rajiv Kumar, Genetics of pigmentation in skin cancer — A review, Mutation Research/Reviews in Mutation Research, 10.1016/j.mrrev.2010.06.002, 705, 2, (141-153), (2010).




