Abscisic Acid‐mediated Epigenetic Processes in Plant Development and Stress Responses
Supported by SERC Fact Track Scheme for Young Scientist, DST, Govt. of India, New Delhi to V. Chinnusamy; the State Key Basic Research and Development Plan of China (2003CB114300) and the National Natural Science Foundation of China (30421002 and 30670182) to Z. Gong.
Abstract
Abscisic acid (ABA) regulates diverse plant processes, growth and development under non‐stress conditions and plays a pivotal role in abiotic stress tolerance. Although ABA‐regulated genetic processes are well known, recent discoveries reveal that epigenetic processes are an integral part of ABA‐regulated processes. Epigenetic mechanisms, namely, histone modifications and cytosine DNA methylation‐induced modification of genome give rise to epigenomes, which add diversity and complexity to the genome of organisms. Histone monoubiquitination appears to regulate ABA levels in developing seeds through histone H2B monoubiquitination. ABA and H2B ubiquitination dependent chromatin remodeling regulate seed dormancy. Transcription factor networks necessary for seed maturation are repressed by histone deacetylases (HDACs)‐dependent and PICKLE chromatin remodeling complexes (CRCs), whereas ABA induces the expression of these genes directly or through repression of HDACs. Abiotic stress‐induced ABA regulates stomatal response and stress‐responsive gene expression through HDACs and HOS15‐dependent histone deacetylation, as well as through the ATP‐dependent SWITCH/SUCROSE NONFERMENTING CRC. ABA also probably regulates the abiotic stress response through DNA methylation and short interfering RNA pathways. Further studies on ABA‐regulated epigenome will be of immense use to understand the plant development, stress adaptation and stress memory.
Number of times cited: 121
- Ankush Ashok Saddhe, Kumar Kundan and Dwivedi Padmanabh, Mechanism of ABA Signaling in Response to Abiotic Stress in Plants, Mechanism of Plant Hormone Signaling under Stress, (173-195), (2017).
- Chunmei He, Zhenming Yu, Jaime A. Teixeira da Silva, Jianxia Zhang, Xuncheng Liu, Xiaojuan Wang, Xinhua Zhang, Songjun Zeng, Kunlin Wu, Jianwen Tan, Guohua Ma, Jianping Luo and Jun Duan, DoGMP1 from Dendrobium officinale contributes to mannose content of water-soluble polysaccharides and plays a role in salt stress response, Scientific Reports, 7, (41010), (2017).
- Jun-E Guo, Zongli Hu, Fenfen Li, Lincheng Zhang, Xiaohui Yu, Boyan Tang and Guoping Chen, Silencing of histone deacetylase SlHDT3 delays fruit ripening and suppresses carotenoid accumulation in tomato, Plant Science, 265, (29), (2017).
- Mahmut Sinan Taspinar, Murat Aydin, Burcu Sigmaz, Nalan Yildirim and Guleray Agar, Protective role of humic acids against picloram-induced genomic instability and DNA methylation in Phaseolus vulgaris , Environmental Science and Pollution Research, 24, 29, (22948), (2017).
- Dibyendu Talukdar, Epigenetics in Arsenic Toxicity: Mechanistic Response, Alterations, and Regulations, Arsenic Contamination in the Environment, 10.1007/978-3-319-54356-7_4, (67-101), (2017).
- R. Manoharlal, G. V. S. Saiprasad, C. Ullagaddi and A. Kovařík, Gibberellin A3 as an epigenetic determinant of global DNA hypo-methylation in tobacco, Biologia Plantarum, (2017).
- Maria Soledad Sosa, Emily Bernstein and Julio A. Aguirre-Ghiso, Epigenetic Regulation of Cancer Dormancy as a Plasticity Mechanism for Metastasis Initiation, Tumor Dormancy and Recurrence, 10.1007/978-3-319-59242-8_1, (1-16), (2017).
- Yu Ling, Sahar Alshareef, Haroon Butt, Jorge Lozano‐Juste, Lixin Li, Aya A. Galal, Ahmed Moustafa, Afaque A. Momin, Manal Tashkandi, Dale N. Richardson, Hiroaki Fujii, Stefan Arold, Pedro L. Rodriguez, Paula Duque and Magdy M. Mahfouz, Pre‐mRNA splicing repression triggers abiotic stress signaling in plants, The Plant Journal, 89, 2, (291-309), (2017).
- Fei Gao, Tanglu Hu, Weiming Tan, Chunxin Yu, Zhaohu Li, Lizhen Zhang and Liusheng Duan, Photoprotectant improves photostability and bioactivity of abscisic acid under UV radiation, Journal of Photochemistry and Photobiology B: Biology, 10.1016/j.jphotobiol.2016.02.016, 158, (99-104), (2016).
- Guan-Hua He, Ji-Yuan Xu, Yan-Xia Wang, Jia-Ming Liu, Pan-Song Li, Ming Chen, You-Zhi Ma and Zhao-Shi Xu, Drought-responsive WRKY transcription factor genes TaWRKY1 and TaWRKY33 from wheat confer drought and/or heat resistance in Arabidopsis, BMC Plant Biology, 10.1186/s12870-016-0806-4, 16, 1, (2016).
- Huimin Fang, Qingling Meng, Hongsheng Zhang and Ji Huang, Knock-down of a RING finger gene confers cold tolerance, Bioengineered, 7, 1, (39), (2016).
- Stefan Simm, Klaus-Dieter Scharf, Sridharan Jegadeesan, Maria Luisa Chiusano, Nurit Firon and Enrico Schleiff, Survey of Genes Involved in Biosynthesis, Transport, and Signaling of Phytohormones with Focus on Solanum lycopersicum, Bioinformatics and Biology Insights, 10, (BBI.S38425), (2016).
- Kai Shu, Xiao-dong Liu, Qi Xie and Zu-hua He, Two Faces of One Seed: Hormonal Regulation of Dormancy and Germination, Molecular Plant, 9, 1, (34), (2016).
- Tao Yang and Xing Liu, Comparative Transcriptome Analysis of Isoetes Sinensis Under Terrestrial and Submerged Conditions, Plant Molecular Biology Reporter, 34, 1, (136), (2016).
- Yu Zheng, Yue Ding, Xuan Sun, Sisi Xie, Dan Wang, Xiaoyun Liu, Lufang Su, Wei Wei, Lei Pan and Dao-Xiu Zhou, Histone deacetylase HDA9 negatively regulates salt and drought stress responsiveness in Arabidopsis, Journal of Experimental Botany, 67, 6, (1703), (2016).
- Chisato Takenaka, Mie Miyahara, Takeshi Ohta and Trofim C. Maximov, Effects of Two-Year Variation in Soil Moisture Condition on the Development of Larch Root System in Eastern Siberia, American Journal of Climate Change, 05, 02, (157), (2016).
- Feifei Yu, Yaorong Wu and Qi Xie, Ubiquitin–Proteasome System in ABA Signaling: From Perception to Action, Molecular Plant, 9, 1, (21), (2016).
- Peng Wang, Lingling Ma, Ya Li, Shu’an Wang, Linfang Li, Rutong Yang, Yuzhu Ma and Qing Wang, Transcriptome profiling of indole-3-butyric acid-induced adventitious root formation in softwood cuttings of the Catalpa bungei variety ‘YU-1’ at different developmental stages, Genes & Genomics, 38, 2, (145), (2016).
- X. Liu, S. Yang, C.-W. Yu, C.-Y. Chen and K. Wu, Histone Acetylation and Plant Development, Developmental Signaling in Plants, 10.1016/bs.enz.2016.08.001, (173-199), (2016).
- Saroj K. Sah, Kambham R. Reddy and Jiaxu Li, Abscisic Acid and Abiotic Stress Tolerance in Crop Plants, Frontiers in Plant Science, 7, (2016).
- Jacobo Arango, Jesús Beltrán, Jonathan Nuñez and Paul Chavarriaga, Evidence of Epigenetic Mechanisms Affecting Carotenoids, Carotenoids in Nature, 10.1007/978-3-319-39126-7_11, (295-307), (2016).
- Gunjan Sirohi, Bipin K. Pandey, Priyanka Deveshwar and Jitender Giri, Emerging Trends in Epigenetic Regulation of Nutrient Deficiency Response in Plants, Molecular Biotechnology, 58, 3, (159), (2016).
- Hongli Ji, Godelieve Gheysen, Chhana Ullah, Ruben Verbeek, Chenjing Shang, David De Vleesschauwer, Monica Höfte and Tina Kyndt, The role of thionins in rice defence against root pathogens, Molecular Plant Pathology, 16, 8, (870-881), (2015).
- Marta Pérez, Maria Jesús Cañal and Peter E. Toorop, Expression analysis of epigenetic and abscisic acid-related genes during maturation of Quercus suber somatic embryos, Plant Cell, Tissue and Organ Culture (PCTOC), 121, 2, (353), (2015).
- De-Er Zeng, Pei Hou, Fangming Xiao and Yongsheng Liu, Overexpression of Arabidopsis XERICO gene confers enhanced drought and salt stress tolerance in rice (Oryza Sativa L.), Journal of Plant Biochemistry and Biotechnology, 24, 1, (56), (2015).
- Jack M. Colicchio, Patrick J. Monnahan, John K. Kelly and Lena C. Hileman, Gene expression plasticity resulting from parental leaf damage in imulus guttatus, New Phytologist, 205, 2, (894-906), (2014).
- Tielong Cheng, Jinhui Chen, Abd_Allah EF, Pengkai Wang, Guangping Wang, Xiangyang Hu and Jisen Shi, Quantitative proteomics analysis reveals that S-nitrosoglutathione reductase (GSNOR) and nitric oxide signaling enhance poplar defense against chilling stress, Planta, 242, 6, (1361), (2015).
- Chutipong Akkasaeng, Natpapath Tantisuwic, Ni-on Ngamhui, Sittiruk Roytrakul, Sanun Jogloy and Aran Pathanotha, Changes in Protein Expression in Peanut Leaves in the Response to Progressive Water Stress, Pakistan Journal of Biological Sciences, 18, 1, (19), (2015).
- Chae Lim, Woonhee Baek, Jangho Jung, Jung-Hyun Kim and Sung Lee, Function of ABA in Stomatal Defense against Biotic and Drought Stresses, International Journal of Molecular Sciences, 16, 12, (15251), (2015).
- Filiz Aygun Erturk, Guleray Agar, Gokce Nardemir and Esra Arslan, Cytogenetic and epigenetic alterations by cobalt and nickel onZea maysL, Toxicological & Environmental Chemistry, 97, 10, (1350), (2015).
- Marta Pérez, Marcos Viejo, Maite LaCuesta, Peter Toorop and María Jesús Cañal, Epigenetic and hormonal profile during maturation of Quercus Suber L. somatic embryos, Journal of Plant Physiology, 173, (51), (2015).
- Su-Fang Chen, Ming-Wan Li, Hui-Juan Jing, Ren-Chao Zhou, Gui-Li Yang, Wei Wu, Qiang Fan, Wen-Bo Liao and Zhong-Jian Liu, De Novo Transcriptome Assembly in Firmiana danxiaensis, a Tree Species Endemic to the Danxia Landform, PLOS ONE, 10, 10, (e0139373), (2015).
- Nepolean Thirunavukkarasu, Firoz Hossain, Kanika Arora, Rinku Sharma, Kaliyugam Shiriga, Swati Mittal, Sweta Mohan, Pottekatt Namratha, Sreelatha Dogga, Tikka Rani, Sumalini Katragadda, Abhishek Rathore, Trushar Shah, Trilochan Mohapatra and Hari Gupta, Functional mechanisms of drought tolerance in subtropical maize (Zea mays L.) identified using genome-wide association mapping, BMC Genomics, 15, 1, (1182), (2014).
- Filiz Aygun Erturk, Guleray Agar, Esra Arslan, Gokce Nardemir and Zehra Sahin, Determination of genomic instability and DNA methylation effects of Cr on maize (Zea mays L.) using RAPD and CRED-RA analysis, Acta Physiologiae Plantarum, 36, 6, (1529), (2014).
- Ray A. Bressan, Jian‐Kang Zhu, Michael J. Van Oosten, Albino Maggio, Hans J. Bohnert and Viswanathan Chinnusamy, Epigenetics Connects the Genome to Its Environment, Plant Breeding Reviews: Volume 38, (69-142), (2014).
- Aída Araceli Rodríguez-Hernández, María Azucena Ortega-Amaro, Pablo Delgado-Sánchez, Julio Salinas and Juan Francisco Jiménez-Bremont, AtGRDP1 Gene Encoding a Glycine-Rich Domain Protein Is Involved in Germination and Responds to ABA Signalling, Plant Molecular Biology Reporter, 32, 6, (1187), (2014).
- Viswanathan Chinnusamy, Monika Dalal and Jian‐Kang Zhu, Epigenetic regulation of abiotic stress responses in plants, Plant Abiotic Stress, (203-229), (2014).
- Rosa Maria Cossu, Tommaso Giordani, Andrea Cavallini and Lucia Natali, High-throughput analysis of transcriptome variation during water deficit in a poplar hybrid: a general overview, Tree Genetics & Genomes, 10, 1, (53), (2014).
- Dayong Li, Huijuan Zhang, Yongbo Hong, Lei Huang, Xiaohui Li, Yafen Zhang, Zhigang Ouyang and Fengming Song, Genome-Wide Identification, Biochemical Characterization, and Expression Analyses of the YTH Domain-Containing RNA-Binding Protein Family in Arabidopsis and Rice, Plant Molecular Biology Reporter, 32, 6, (1169), (2014).
- Ning Liu, Yong Ding, Michael Fromm and Zoya Avramova, Different gene-specific mechanisms determine the ‘revised-response’ memory transcription patterns of a subset of A. thaliana dehydration stress responding genes, Nucleic Acids Research, 42, 9, (5556), (2014).
- Ning Liu, Michael Fromm and Zoya Avramova, H3K27me3 and H3K4me3 Chromatin Environment at Super-Induced Dehydration Stress Memory Genes of Arabidopsis thaliana, Molecular Plant, 7, 3, (502), (2014).
- Rajesh Mehrotra, Purva Bhalothia, Prashali Bansal, Mahesh Kumar Basantani, Vandana Bharti and Sandhya Mehrotra, Abscisic acid and abiotic stress tolerance – Different tiers of regulation, Journal of Plant Physiology, 171, 7, (486), (2014).
- Xiao-guo ZHENG, Liang CHEN, Qiao-jun LOU, Hui XIA, Ming-shou LI and Li-jun LUO, Changes in DNA Methylation Pattern at Two Seedling Stages in Water Saving and Drought-Resistant Rice Variety after Drought Stress Domestication, Rice Science, 21, 5, (262), (2014).
- Hengfu Yin, Chun Ju Chen, Jun Yang, David J. Weston, Jin-Gui Chen, Wellington Muchero, Ning Ye, Timothy J. Tschaplinski, Stan D. Wullschleger, Zong-Ming (Max) Cheng, Gerald A. Tuskan and Xiaohan Yang, Functional Genomics of Drought Tolerance in Bioenergy Crops, Critical Reviews in Plant Sciences, 33, 2-3, (205), (2014).
- Elżbieta Lewandowska-Gnatowska, Lidia Polkowska-Kowalczyk, Jadwiga Szczegielniak, Mirosława Barciszewska, Jan Barciszewski and Grażyna Muszyńska, Is DNA methylation modulated by wounding-induced oxidative burst in maize?, Plant Physiology and Biochemistry, 82, (202), (2014).
- Usha Chakraborty, Bhumika Pradhan and Rohini Lama, Metabolome Analyses for Understanding Abiotic Stress Responses in Plants to Evolve Management Strategies, Climate Change and Plant Abiotic Stress Tolerance, (727-754), (2013).
- Marcin Michalak, Mirosława Z. Barciszewska, Jan Barciszewski, Beata P. Plitta, Paweł Chmielarz and Peter Meyer, Global Changes in DNA Methylation in Seeds and Seedlings of Pyrus communis after Seed Desiccation and Storage, PLoS ONE, 8, 8, (e70693), (2013).
- Jochen Gohlke, Claus-Juergen Scholz, Susanne Kneitz, Dana Weber, Joerg Fuchs, Rainer Hedrich, Rosalia Deeken and John M. McDowell, DNA Methylation Mediated Control of Gene Expression Is Critical for Development of Crown Gall Tumors, PLoS Genetics, 9, 2, (e1003267), (2013).
- Klaus Humbeck, Epigenetic and small RNA regulation of senescence, Plant Molecular Biology, 82, 6, (529), (2013).
- Paul M. Hasegawa, Sodium (Na+) homeostasis and salt tolerance of plants, Environmental and Experimental Botany, 92, (19), (2013).
- Wei-hong Liang, Li Li, Fan Zhang, Yue-xia Liu, Mi-mi Li, Hong-hao Shi, Hui Li, Fei Shang, Chen Lou, Qun-ting Lin, Jia-jia Li and Xian-guang Yang, Effects of abiotic stress, light, phytochromes and phytohormones on the expression of OsAQP, a rice aquaporin gene, Plant Growth Regulation, 69, 1, (21), (2013).
- Sanghyeob Lee and Doil Choi, Comparative transcriptome analysis of pepper (Capsicum annuum) revealed common regulons in multiple stress conditions and hormone treatments, Plant Cell Reports, 32, 9, (1351), (2013).
- Liquan Guo, Cynthia D. Nezames, Lianxi Sheng, Xingwang Deng and Ning Wei, Cullin‐RING Ubiquitin Ligase Family in Plant Abiotic Stress Pathways, Journal of Integrative Plant Biology, 55, 1, (21-30), (2013).
- Lianyu Yuan, Xuncheng Liu, Ming Luo, Songguang Yang and Keqiang Wu, Involvement of Histone Modifications in Plant Abiotic Stress Responses, Journal of Integrative Plant Biology, 55, 10, (892-901), (2013).
- Sanghee Kim, Jungeun Lee, Jun-Yi Yang, Choonkyun Jung and Nam-Hai Chua, Arabidopsis histone methyltransferase SET DOMAIN GROUP2 is required for regulation of various hormone responsive genes, Journal of Plant Biology, 56, 1, (39), (2013).
- Jun Zhao, Yulong Gao, Zhiyuan Zhang, Tianzi Chen, Wangzhen Guo and Tianzhen Zhang, A receptor-like kinase gene (GbRLK) from Gossypium barbadense enhances salinity and drought-stress tolerance in Arabidopsis, BMC Plant Biology, 13, 1, (110), (2013).
- Mahantesha Naika, Khader Shameer and Ramanathan Sowdhamini, Comparative analyses of stress-responsive genes in Arabidopsis thaliana: insight from genomic data mining, functional enrichment, pathway analysis and phenomics, Molecular BioSystems, 9, 7, (1888), (2013).
- Tingxiu Yao, Dan Jin, Qian Liu and Zhizhong Gong, Abscisic Acid Suppresses the Highly Occurred Somatic Homologous Recombination in Arabidopsis rfc1 Mutant, Journal of Genetics and Genomics, 40, 9, (465), (2013).
- Julia Walter, Anke Jentsch, Carl Beierkuhnlein and Juergen Kreyling, Ecological stress memory and cross stress tolerance in plants in the face of climate extremes, Environmental and Experimental Botany, 94, (3), (2013).
- Yan Wang, Xiang Tao, Xiao-Mei Tang, Liang Xiao, Jiao-long Sun, Xue-Feng Yan, Dan Li, Hong-Yuan Deng and Xin-Rong Ma, Comparative transcriptome analysis of tomato (Solanum lycopersicum) in response to exogenous abscisic acid, BMC Genomics, 14, 1, (841), (2013).
- Xiuju Wang, Xiaoping Zhu, Paul Tooley and Xiuguo Zhang, Cloning and functional analysis of three genes encoding polygalacturonase-inhibiting proteins from Capsicum annuum and transgenic CaPGIP1 in tobacco in relation to increased resistance to two fungal pathogens, Plant Molecular Biology, 10.1007/s11103-013-0007-6, 81, 4-5, (379-400), (2013).
- Pranav Pankaj Sahu, Garima Pandey, Namisha Sharma, Swati Puranik, Mehanathan Muthamilarasan and Manoj Prasad, Epigenetic mechanisms of plant stress responses and adaptation, Plant Cell Reports, 32, 8, (1151), (2013).
- Anastasios Alatzas, Histones and Plant Hormones: New Evidence for an Interesting Interplay, The Botanical Review, 79, 3, (317), (2013).
- Alessio Aprile, Lenka Havlickova, Riccardo Panna, Caterina Marè, Grazia M Borrelli, Daniela Marone, Carla Perrotta, Patrizia Rampino, Luigi De Bellis, Vladislav Curn, Anna M Mastrangelo, Fulvia Rizza and Luigi Cattivelli, Different stress responsive strategies to drought and heat in two durum wheat cultivars with contrasting water use efficiency, BMC Genomics, 14, 1, (821), (2013).
- Ai-Sheng Xiong, Hai-Hua Jiang, Jing Zhuang, Ri-He Peng, Xiao-Fen Jin, Bo Zhu, Feng Wang, Jian Zhang and Quan-Hong Yao, Expression and Function of a Modified AP2/ERF Transcription Factor from Brassica napus Enhances Cold Tolerance in Transgenic Arabidopsis, Molecular Biotechnology, 53, 2, (198), (2013).
- Suman Lakhanpaul, Vibhuti Singh, Sachin Kumar, Deepak Bhardwaj and Kangila Venkataramana Bhat, Sesame: Overcoming the Abiotic Stresses in the Queen of Oilseed Crops, Improving Crop Resistance to Abiotic Stress, (1251-1283), (2012).
- Siyoung Lee, Hyeong Cheol Park, Suyoung Bae, Jaewoo Hong, Jida Choi, Kwangwon Hong, Hyunjhung Jhun, Kangchang Kim, Eusom Kim, Seounghyun Jo, Woe-Yeon Kim, Dae-Jin Yun and Soohyun Kim, Monoclonal Antibodies Against Recombinant AtHOS15, Hybridoma, 31, 2, (118), (2012).
- Yuguang Song, Dandan Ji, Shuo Li, Peng Wang, Qiang Li, Fengning Xiang and Xiaoyu Zhang, The Dynamic Changes of DNA Methylation and Histone Modifications of Salt Responsive Transcription Factor Genes in Soybean, PLoS ONE, 7, 7, (e41274), (2012).
- Mohammad Reza Amirjani, Effect of NaCl stress on rice physiological properties, Archives Of Phytopathology And Plant Protection, 45, 2, (228), (2012).
- Cecilia Contreras-Cubas, Miguel Palomar, Mario Arteaga-Vázquez, José Luis Reyes and Alejandra A. Covarrubias, Non-coding RNAs in the plant response to abiotic stress, Planta, 10.1007/s00425-012-1693-z, 236, 4, (943-958), (2012).
- Joachim Kilian, Florian Peschke, Kenneth W. Berendzen, Klaus Harter and Dierk Wanke, Prerequisites, performance and profits of transcriptional profiling the abiotic stress response, Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, 1819, 2, (166), (2012).
- Kai-Fa WEI, Juan CHEN, Yan-Feng CHEN, Ling-Juan WU and Wen-Suo JIA, Molecular mechanism for dynamic regulation of endogenous ABA signal level, Hereditas (Beijing), 34, 3, (296), (2012).
- Abdelali Hannoufa and Zakir Hossain, Regulation of carotenoid accumulation in plants, Biocatalysis and Agricultural Biotechnology, 1, 3, (198), (2012).
- Jinzhong Cui, Ping He, Fenghong Liu, Jingjing Tan, Lingfeng Chen and Joshua Fenn, 60 Years of Development of the Journal of Integrative Plant Biology, Journal of Integrative Plant Biology, 54, 10, (682-702), (2012).
- Athanasios Tsaftaris, Aliki Kapazoglou and Nikos Darzentas, From epigenetics to epigenomics and their implications in plant breeding, Plant Biotechnology and Agriculture, 10.1016/B978-0-12-381466-1.00014-6, (207-226), (2012).
- Hyong Woo Choi and Byung Kook Hwang, The pepper extracellular peroxidase CaPO2 is required for salt, drought and oxidative stress tolerance as well as resistance to fungal pathogens, Planta, 235, 6, (1369), (2012).
- Li Zhang, Yi Wang, Xinzhong Zhang, Min Zhang, Deguo Han, Changpeng Qiu and Zhenhai Han, Dynamics of phytohormone and DNA methylation patterns changes during dormancy induction in strawberry (Fragaria × ananassa Duch.), Plant Cell Reports, 31, 1, (155), (2012).
- SUNG CHUL LEE and SHENG LUAN, ABA signal transduction at the crossroad of biotic and abiotic stress responses, Plant, Cell & Environment, 35, 1, (53-60), (2011).
- Alicia Muñoz-Mayor, Benito Pineda, Jose O. Garcia-Abellán, Teresa Antón, Begoña Garcia-Sogo, Paloma Sanchez-Bel, Francisco B. Flores, Alejandro Atarés, Trinidad Angosto, Jose A. Pintor-Toro, Vicente Moreno and Maria C. Bolarin, Overexpression of dehydrin tas14 gene improves the osmotic stress imposed by drought and salinity in tomato, Journal of Plant Physiology, 169, 5, (459), (2012).
- Jun-ning Wang, Jian-fei Kuang, Wei Shan, Jiao Chen, Hui Xie, Wang-jin Lu, Jian-wen Chen and Jian-ye Chen, Expression profiles of a banana fruit linker histone H1 gene MaHIS1 and its interaction with a WRKY transcription factor, Plant Cell Reports, 31, 8, (1485), (2012).
- Susan R. McCouch, Kenneth L. McNally, Wen Wang and Ruaraidh Sackville Hamilton, Genomics of gene banks: A case study in rice, American Journal of Botany, 99, 2, (407-423), (2012).
- Grant R Cramer, Kaoru Urano, Serge Delrot, Mario Pezzotti and Kazuo Shinozaki, Effects of abiotic stress on plants: a systems biology perspective, BMC Plant Biology, 11, 1, (163), (2011).
- Sateesh Kagale and Kevin Rozwadowski, EAR motif-mediated transcriptional repression in plants, Epigenetics, 6, 2, (141), (2011).
- Manoj K. Rai, N. S. Shekhawat, Harish, Amit K. Gupta, M. Phulwaria, Kheta Ram and U. Jaiswal, The role of abscisic acid in plant tissue culture: a review of recent progress, Plant Cell, Tissue and Organ Culture (PCTOC), 106, 2, (179), (2011).
- María Estrella Santamaría, Roberto Rodríguez, María Jesús Cañal and Peter E. Toorop, Transcriptome analysis of chestnut (Castanea sativa) tree buds suggests a putative role for epigenetic control of bud dormancy, Annals of Botany, 108, 3, (485), (2011).
- Jian Zhang, Wen-Jin Yu, Ai-Sheng Xiong, Bahman Bahramnejad and Larry R. Erickson, Isolation and characterization of a harvest-induced promoter of an alfalfa gene, hi7, Plant Growth Regulation, 64, 2, (119), (2011).
- Thomas K. Uthup, Minimol Ravindran, K. Bini and Saha Thakurdas, Divergent DNA Methylation Patterns Associated with Abiotic Stress in Hevea brasiliensis, Molecular Plant, 4, 6, (996), (2011).
- Weiwei Song, Xinrong Ma, Hong Tan and Jinyan Zhou, Abscisic acid enhances resistance to Alternaria solani in tomato seedlings, Plant Physiology and Biochemistry, 49, 7, (693), (2011).
- Adam Colville, Reem Alhattab, Ming Hu, Hélène Labbé, Tim Xing and Brian Miki, Role of HD2 genes in seed germination and early seedling growth in Arabidopsis, Plant Cell Reports, 30, 10, (1969), (2011).
- Andrés P. Gagete, Luis Franco and M. Isabel Rodrigo, The Pisum sativum psp54 gene requires ABI3 and a chromatin remodeller to switch from a poised to a transcriptionally active state, New Phytologist, 192, 2, (353-363), (2011).
- Shi-Qing Gao, Ming Chen, Zhao-Shi Xu, Chang-Ping Zhao, Liancheng Li, Hui-jun Xu, Yi-miao Tang, Xin Zhao and You-Zhi Ma, The soybean GmbZIP1 transcription factor enhances multiple abiotic stress tolerances in transgenic plants, Plant Molecular Biology, 75, 6, (537), (2011).
- Jianjun Guo, Xiaohan Yang, David J. Weston and Jin‐Gui Chen, Abscisic Acid Receptors: Past, Present and Future, Journal of Integrative Plant Biology, 53, 6, (469-479), (2011).
- Bingyue Lu, Kun Xie, Chunyan Yang, Long Zhang, Tao Wu, Xi Liu, Ling Jiang and Jianmin Wan, Genetic Analysis of Two Weak Dormancy Mutants Derived from Strong Seed Dormancy Wild Type Rice N22 (Oryza sativa), Journal of Integrative Plant Biology, 53, 5, (338-346), (2011).
- Yong Ding, Zoya Avramova and Michael Fromm, The Arabidopsis trithorax‐like factor ATX1 functions in dehydration stress responses via ABA‐dependent and ABA‐independent pathways, The Plant Journal, 66, 5, (735-744), (2011).
- Erwann Arc, Marc Galland, Gwendal Cueff, Béatrice Godin, Imen Lounifi, Dominique Job and Loïc Rajjou, Reboot the system thanks to protein post‐translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment, PROTEOMICS, 11, 9, (1606-1618), (2011).
- Christopher I. Cazzonelli, Goldacre Review: Carotenoids in nature: insights from plants and beyond, Functional Plant Biology, 38, 11, (833), (2011).
- Dortje Golldack, Ines Lüking and Oksoon Yang, Plant tolerance to drought and salinity: stress regulating transcription factors and their functional significance in the cellular transcriptional network, Plant Cell Reports, 30, 8, (1383), (2011).
- Marie-Theres Hauser, Werner Aufsatz, Claudia Jonak and Christian Luschnig, Transgenerational epigenetic inheritance in plants, Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, 10.1016/j.bbagrm.2011.03.007, 1809, 8, (459-468), (2011).
- Eric S.L. Hsiao and Jason T.C. Tzen, Ubiquitination of oleosin-H and caleosin in sesame oil bodies after seed germination, Plant Physiology and Biochemistry, 49, 1, (77), (2011).
- Zoya Avramova, Epigenetic Regulatory Mechanisms in Plants, Handbook of Epigenetics, 10.1016/B978-0-12-375709-8.00016-2, (251-278), (2011).
- Diana V Dugas, Marcela K Monaco, Andrew Olson, Robert R Klein, Sunita Kumari, Doreen Ware and Patricia E Klein, Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid, BMC Genomics, 10.1186/1471-2164-12-514, 12, 1, (2011).
- Ruoyu Guo, Feifei Yu, Zheng Gao, Hailong An, Xuecheng Cao and Xingqi Guo, GhWRKY3, a novel cotton (Gossypium hirsutum L.) WRKY gene, is involved in diverse stress responses, Molecular Biology Reports, 38, 1, (49), (2011).
- Tijen Demiral, Ismail Turkan and A. Hediye Sekmen, Signalling Strategies During Drought and Salinity, Recent News, Plant Responses to Drought and Salinity Stress - Developments in a Post-Genomic Era, 10.1016/B978-0-12-387692-8.00008-4, (293-317), (2011).
- Santosh Kumar, Shiling Jiang, Sravan K. Jami and Robert D. Hill, Cloning and characterization of barley caryopsis FCA, Physiologia Plantarum, 143, 1, (93), (2011).
- Xue-Mei Li, Li-Hong Zhang, Lian-Ju Ma and Yue-Ying Li, Elevated Carbon Dioxide and/or Ozone Concentrations Induce Hormonal Changes in Pinus tabulaeformis, Journal of Chemical Ecology, 37, 7, (779), (2011).
- Yasunari Fujita, Miki Fujita, Kazuo Shinozaki and Kazuko Yamaguchi-Shinozaki, ABA-mediated transcriptional regulation in response to osmotic stress in plants, Journal of Plant Research, 124, 4, (509), (2011).
- Woong Han, Hanma Zhang and Myeong-Hyeon Wang, Fluridone affects quiescent centre division in the Arabidopsis thaliana root stem cell niche, BMB Reports , 43, 12, (813), (2010).
- JONG‐MYONG KIM, TAIKO K. TO, TATSUYA NISHIOKA and MOTOAKI SEKI, Chromatin regulation functions in plant abiotic stress responses, Plant, Cell & Environment, 33, 4, (604-611), (2009).
- Yingxiang Wang, Haicui Suo, Yan Zheng, Kaidong Liu, Chuxiong Zhuang, Kristopher T. Kahle, Hong Ma and Xiaolong Yan, The soybean root‐specific protein kinase GmWNK1 regulates stress‐responsive ABA signaling on the root system architecture, The Plant Journal, 64, 2, (230-242), (2010).
- Nese Sreenivasulu, Ljudmilla Borisjuk, Björn H. Junker, Hans-Peter Mock, Hardy Rolletschek, Udo Seiffert, Winfriede Weschke and Ulrich Wobus, Barley Grain Development, , 10.1016/S1937-6448(10)81002-0, (49-89), (2010).
- Justin W. Walley and Katayoon Dehesh, Molecular Mechanisms Regulating Rapid Stress Signaling Networks in Arabidopsis, Journal of Integrative Plant Biology, 52, 4, (354-359), (2010).
- Kyproula Demetriou, Aliki Kapazoglou, Konstantinos Bladenopoulos and Athanasios S. Tsaftaris, Epigenetic Chromatin Modifiers in Barley: II. Characterization and Expression Analysis of the HDA1 Family of Barley Histone Deacetylases During Development and in Response to Jasmonic Acid, Plant Molecular Biology Reporter, 28, 1, (9), (2010).
- Kai Xun Chan, Peter Alexander Crisp, Gonzalo Martin Estavillo and Barry James Pogson, Chloroplast-to-nucleus communication, Plant Signaling & Behavior, 5, 12, (1575), (2010).
- SHUO LI, CHUNHUI XU, YANAN YANG and GUANGMIN XIA, Functional analysis of TaDi19A, a salt‐responsive gene in wheat, Plant, Cell & Environment, 33, 1, (117-129), (2009).
- Stephanie Jahnke, Barbara Sarholz, Alexander Thiemann, Vera Kühr, José F. Gutiérrez-Marcos, Hartwig H. Geiger, Hans-Peter Piepho and Stefan Scholten, Heterosis in early seed development: a comparative study of F1 embryo and endosperm tissues 6 days after fertilization, Theoretical and Applied Genetics, 120, 2, (389), (2010).
- Donna M. Bond, Elizabeth S. Dennis and Elizabeth J. Finnegan, Hypoxia, Plant Signaling & Behavior, 4, 8, (773), (2009).
- Christopher Ian Cazzonelli, Kuide Yin and Barry J. Pogson, Potential implications for epigenetic regulation of carotenoid biosynthesis during root and shoot development, Plant Signaling & Behavior, 4, 4, (339), (2009).
- Karsten Melcher, Ley-Moy Ng, X. Edward Zhou, Fen-Fen Soon, Yong Xu, Kelly M. Suino-Powell, Sang-Youl Park, Joshua J. Weiner, Hiroaki Fujii, Viswanathan Chinnusamy, Amanda Kovach, Jun Li, Yonghong Wang, Jiayang Li, Francis C. Peterson, Davin R. Jensen, Eu-Leong Yong, Brian F. Volkman, Sean R. Cutler, Jian-Kang Zhu and H. Eric Xu, A gate–latch–lock mechanism for hormone signalling by abscisic acid receptors , Nature, 462, 7273, (602), (2009).
- MaEstrella Santamaría, Rodrigo Hasbún, MaJosé Valera, Mónica Meijón, Luis Valledor, Jose L. Rodríguez, Peter E. Toorop, MaJesús Cañal and Roberto Rodríguez, Acetylated H4 histone and genomic DNA methylation patterns during bud set and bud burst in Castanea sativa, Journal of Plant Physiology, 10.1016/j.jplph.2009.02.014, 166, 13, (1360-1369), (2009).
- Cristina Alexandre, Yvonne Möller-Steinbach, Nicole Schönrock, Wilhelm Gruissem and Lars Hennig, Arabidopsis MSI1 Is Required for Negative Regulation of the Response to Drought Stress, Molecular Plant, 2, 4, (675), (2009).
- Viswanathan Chinnusamy and Jian-Kang Zhu, Epigenetic regulation of stress responses in plants, Current Opinion in Plant Biology, 12, 2, (133), (2009).




