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Angewandte Chemie International Edition
Communication

yDNA: A New Geometry for Size‐Expanded Base Pairs*

Haige Lu

Department of Chemistry, Stanford University, Stanford, CA 94305‐5080, USA, Fax: (+1) 650‐725‐0259

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Kaizhang He Dr.

Department of Chemistry, Stanford University, Stanford, CA 94305‐5080, USA, Fax: (+1) 650‐725‐0259

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Eric T. Kool Prof. Dr.

E-mail address:kool@leland.stanford.edu

Department of Chemistry, Stanford University, Stanford, CA 94305‐5080, USA, Fax: (+1) 650‐725‐0259

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First published: 02 November 2004
Cited by: 54
*

This work was supported by the U.S. National Institutes of Health (GM63587) and by an Abbott Laboratories Graduate Research Fellowship to H.L.

Abstract

Room for expansion: Insertion of a benzene ring into the natural adenine heterocycle to generate the analogue yA results in the formation of base pairs that are 2.4 Å wider than natural ones (see structure). Melting temperature and free energy data show that yA⋅T and T⋅yA pairs can self‐assemble into cooperative helices that are considerably more stable than natural DNA. Thus, yDNA may be a candidate for a new genetic system.

Number of times cited: 54

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