Climate envelope models suggest spatio‐temporal co‐occurrence of refugia of African birds and mammals
Editor: Jeremy Kerr
Abstract
Aim
Studies investigating the theory of tropical refugia for vertebrates have previously focused on a handful of species or a single taxonomic group. We sought to identify the potential location of cross‐taxonomic refugia of African birds and mammals in the Last Glacial Maximum, and used historic climate data to hindcast the location of past ranges of species based on their current distributions.
Location
Mainland sub‐Saharan Africa.
Methods
Using current distributions of 537 mammal and 1265 bird species, we modelled the past distribution of species, taking advantage of recently available reconstructions of climate for the Last Glacial Maximum. Modelled historical ranges were verified individually using standard techniques for evaluating the precision of bioclimatic envelope models. Potential refugia were identified as those areas with a higher overlap of climatically suitable ranges (i.e. levels of species richness) than expected based on randomizing of the modelled past climatically suitable ranges in the sub‐Saharan domain and on the level of resource availability (by modelling past species richness patterns as would be expected given the water–energy theory).
Results
Our models show that during the Last Glacial Maximum areas of high concentration of climatically suitable ranges of birds and mammals tend to aggregate, more than can be accounted for random placement of ranges and resource availability (ecological processes), in the same six areas: Upper Guinea, the Cameroon Highlands, the Congo Basin, the Ethiopian Highlands, the Angola–Namibia area and the south‐east part of South Africa.
Main conclusions
The unusually high aggregation of predicted suitable ranges for birds and mammals in six relatively small geographical areas corresponds to the location of some of the previously suggested refugia. We interpret this – and the similarity of patterns obtained for both birds and mammals – as a strong indication of the existence of refugia in those areas. The results also illustrate the usefulness of bioclimatic envelope models, coupled randomization techniques and macroecological models, for the reconstruction of geographical distribution patterns in the past.
Number of times cited according to CrossRef: 25
- Xuan Liu, Tim M. Blackburn, Tianjian Song, Xianping Li, Cong Huang and Yiming Li, Risks of Biological Invasion on the Belt and Road, Current Biology, 10.1016/j.cub.2018.12.036, (2019).
- Radoslav Kozma, Mette Lillie, Blas M. Benito, Jens‐Christian Svenning and Jacob Höglund, Past and potential future population dynamics of three grouse species using ecological and whole genome coalescent modeling, Ecology and Evolution, 8, 13, (6671-6681), (2018).
- Jerry W Huntley, Johanna A Harvey, Marco Pavia, Giovanni Boano and Gary Voelker, The systematics and biogeography of the Bearded Greenbuls (Aves: Criniger) reveals the impact of Plio-Pleistocene forest fragmentation on Afro-tropical avian diversity, Zoological Journal of the Linnean Society, 10.1093/zoolinnean/zlx086, 183, 3, (672-686), (2017).
- Falko T. Buschke, Luc Brendonck and Bram Vanschoenwinkel, The conservation status of African vertebrates is unrelated to environmental and spatial patterns in their geographic ranges, Biodiversity and Conservation, 10.1007/s10531-017-1449-y, 27, 3, (567-582), (2017).
- Christopher D. Barratt, Beryl A. Bwong, Robert Jehle, H. Christoph Liedtke, Peter Nagel, Renske E. Onstein, Daniel M. Portik, Jeffrey W. Streicher and Simon P. Loader, Vanishing refuge? Testing the forest refuge hypothesis in coastal East Africa using genome‐wide sequence data for seven amphibians, Molecular Ecology, 27, 21, (4289-4308), (2018).
- Anna Brüniche-Olsen, Kenneth F. Kellner, Chase J. Anderson and J. Andrew DeWoody, Runs of homozygosity have utility in mammalian conservation and evolutionary studies, Conservation Genetics, 10.1007/s10592-018-1099-y, 19, 6, (1295-1307), (2018).
- Christopher D. Barratt, Beryl A. Bwong, Renske E. Onstein, Dan F. Rosauer, Michele Menegon, Nike Doggart, Peter Nagel, W. Daniel Kissling and Simon P. Loader, Environmental correlates of phylogenetic endemism in amphibians and the conservation of refugia in the Coastal Forests of Eastern Africa, Diversity and Distributions, 23, 8, (875-887), (2017).
- Jan O. Engler, Darius Stiels, Kathrin Schidelko, Diederik Strubbe, Petra Quillfeldt and Mattia Brambilla, Avian SDMs: current state, challenges, and opportunities, Journal of Avian Biology, 48, 12, (1483-1504), (2017).
- Diana Stralberg, Steven M. Matsuoka, Colleen M. Handel, Fiona K. A. Schmiegelow, Andreas Hamann and Erin M. Bayne, Biogeography of boreal passerine range dynamics in western North America: past, present, and future, Ecography, 40, 9, (1050-1066), (2016).
- Andrés Arias-Alzate, José F. González-Maya, Joaquín Arroyo-Cabrales and Enrique Martínez-Meyer, Wild Felid Range Shift Due to Climatic Constraints in the Americas: a Bottleneck Explanation for Extinct Felids?, Journal of Mammalian Evolution, 24, 4, (427), (2017).
- Patrícia Tiago, Henrique M. Pereira and César Capinha, Using citizen science data to estimate climatic niches and species distributions, Basic and Applied Ecology, 20, (75), (2017).
- Carlos Congrains, Antônio F. Carvalho, Elder A. Miranda, Graeme S. Cumming, Dominic A. W. Henry, Shiiwua A. Manu, Jacinta Abalaka, Cristiano D. Rocha, Moussa S. Diop, Joãozinho Sá, Hamilton Monteiro, Lars H. Holbech, Francis Gbogbo and Silvia N. Del Lama, Genetic and paleomodelling evidence of the population expansion of the cattle egret Bubulcus ibis in Africa during the climatic oscillations of the Late Pleistocene, Journal of Avian Biology, 47, 6, (846-857), (2016).
- T. Hauffe, R. Schultheiß, B. Van Bocxlaer, K. Prömmel and C. Albrecht, Environmental heterogeneity predicts species richness of freshwater mollusks in sub-Saharan Africa, International Journal of Earth Sciences, 105, 6, (1795), (2016).
- Heidi K. Mod, Risto K. Heikkinen, Peter C. le Roux, Henry Väre and Miska Luoto, Contrasting effects of biotic interactions on richness and distribution of vascular plants, bryophytes and lichens in an arctic–alpine landscape, Polar Biology, 39, 4, (649), (2016).
- L. D. Bertola, H. Jongbloed, K. J. van der Gaag, P. de Knijff, N. Yamaguchi, H. Hooghiemstra, H. Bauer, P. Henschel, P. A. White, C. A. Driscoll, T. Tende, U. Ottosson, Y. Saidu, K. Vrieling and H. H. de Iongh, Phylogeographic Patterns in Africa and High Resolution Delineation of Genetic Clades in the Lion (Panthera leo), Scientific Reports, 6, 1, (2016).
- John Rowan, Jason M. Kamilar, Lydia Beaudrot and Kaye E. Reed, Strong influence of palaeoclimate on the structure of modern African mammal communities, Proceedings of the Royal Society B: Biological Sciences, 10.1098/rspb.2016.1207, 283, 1840, (20161207), (2016).
- Virpi Pajunen, Miska Luoto and Janne Soininen, Climate is an important driver for stream diatom distributions, Global Ecology and Biogeography, 25, 2, (198), (2016).
- Heidi K. Mod, Peter C. le Roux, Antoine Guisan and Miska Luoto, Biotic interactions boost spatial models of species richness, Ecography, 38, 9, (913-921), (2015).
- Falko T. Buschke, Luc Brendonck and Bram Vanschoenwinkel, Simple mechanistic models can partially explain local but not range‐wide co‐occurrence of African mammals, Global Ecology and Biogeography, 24, 7, (762-773), (2015).
- Alexandre Hassanin, Souraya Khouider, Guy-Crispin Gembu, Steven M. Goodman, Blaise Kadjo, Nicolas Nesi, Xavier Pourrut, Emmanuel Nakouné and Céline Bonillo, The comparative phylogeography of fruit bats of the tribe Scotonycterini (Chiroptera, Pteropodidae) reveals cryptic species diversity related to African Pleistocene forest refugia, Comptes Rendus Biologies, 338, 3, (197), (2015).
- Tayebeh Arbabi, Javier Gonzalez, Hans‐Hinrich Witt, Rolf Klein and Michael Wink, Mitochondrial phylogeography of the Eurasian Reed Warbler Acrocephalus scirpaceus and the first genetic record of A. s. fuscus in Central Europe, Ibis, 156, 4, (799-811), (2014).
- Enric Batllori, Carol Miller, Marc-André Parisien, Sean A. Parks and Max A. Moritz, Is U.S. climatic diversity well represented within the existing federal protection network?, Ecological Applications, 24, 8, (1898-1907), (2014).
- A. C. Carnaval, E. Waltari, M. T. Rodrigues, D. Rosauer, J. VanDerWal, R. Damasceno, I. Prates, M. Strangas, Z. Spanos, D. Rivera, M. R. Pie, C. R. Firkowski, M. R. Bornschein, L. F. Ribeiro and C. Moritz, Prediction of phylogeographic endemism in an environmentally complex biome, Proceedings of the Royal Society B: Biological Sciences, 281, 1792, (20141461), (2014).
- Terrence C. Demos, Julian C. Kerbis Peterhans, Bernard Agwanda and Michael J. Hickerson, Uncovering cryptic diversity and refugial persistence among small mammal lineages across the Eastern Afromontane biodiversity hotspot, Molecular Phylogenetics and Evolution, 71, (41), (2014).
- Jeremy T. Kerr and Solomon Z. Dobrowski, Predicting the impacts of global change on species, communities and ecosystems: it takes time, Global Ecology and Biogeography, 22, 3, (261-263), (2013).




