Ecology and Evolution is a broad open access journal welcoming all research in ecology, evolution, and conservation science. We are an author-friendly journal, providing a forum for evidence-based views. This means we aim to review all submissions, and look for reasons to publish, not reject. We welcome submissions across taxa, and consider a range of formats, including original research articles, reviews, hypotheses, Registered Reports, Nature Notes, Genetics Notes and Academic Practice in Ecology and Evolution.

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Articles

NATURE NOTES
Open access

Insights Into Cryoconite Community Dynamics on the Alpine Glacier Throughout the Ablation Season

  •  24 March 2025

Graphical Abstract

Insights Into Cryoconite Community Dynamics on the Alpine Glacier Throughout the Ablation Season Issue 3, 2025

The biomass of consumers, tardigrades, negatively correlated with the biomass of green algae, indicating that grazing likely controls algal communities on this alpine glacier.

RESEARCH ARTICLE
Open access

Identification of Individual Texas Horned Lizards (Phrynosoma cornutum) Using Genotypes and Ventral Spot Patterns

  •  24 March 2025

Graphical Abstract

Identification of Individual Texas Horned Lizards (Phrynosoma cornutum) Using Genotypes and Ventral Spot Patterns Issue 3, 2025

This study evaluates multilocus genotypes and natural markings (e.g., ventral spot patterns) on Texas horned lizards as methods for identifying individuals. Genotyping had high power to identify individuals. Additionally, using HotSpotter software resulted in a 94% success rate in photo matching, which could be further improved with manual validation. Photographic identification proved to be a cost-effective, reliable, and non-invasive alternative to traditional tagging methods.

RESEARCH ARTICLE
Open access

Responses of Soil Microbial Communities and Functions in an Alpine Grassland of the Qinghai Lake Basin With Grazing Disturbance

  •  23 March 2025

Graphical Abstract

Responses of Soil Microbial Communities and Functions in an Alpine Grassland of the Qinghai Lake Basin With Grazing Disturbance Issue 3, 2025

The study investigated the response of soil microorganisms in alpine grassland to different grazing intensities in the Qinghai-Tibet Plateau, elucidating the changes in composition and diversity of soil microorganisms among different treatments. Additionally, the nitrogen metabolism pathway was specifically examined.

RESEARCH ARTICLE
Open access

The Cat's Whiskers: Stable Isotopes Reveal Individual Specialisation of Adaptable Caracals (Caracal caracal) Foraging in an Urbanising Landscape

  •  23 March 2025

Graphical Abstract

The Cat's Whiskers: Stable Isotopes Reveal Individual Specialisation of Adaptable Caracals (Caracal caracal) Foraging in an Urbanising Landscape Issue 3, 2025

We use stable isotope analysis of sequential whisker segments to investigate the responses of an urban adaptor to novel resources in and around a major city in the Global South. The caracal, an adaptable mid-sized wild cat species, alters trophic foraging ecology depending on demographics, season and level of exposure to urbanisation in Cape Town, South Africa. Caracals have wide isotopic niches at a population level, but intraindividual variation reveals individual specialisation, revealing that spatiotemporal shifts and individual foraging flexibility are key to their persistence in rapidly transforming landscapes.

RESEARCH ARTICLE
Open access

A Spectacular Northeast Pacific Invasion by a Low Genetic Diversity Parasite, Orthione Griffenis

  •  23 March 2025

Graphical Abstract

A Spectacular Northeast Pacific Invasion by a Low Genetic Diversity Parasite, Orthione Griffenis Issue 3, 2025

This study examined the genetic structure of the invasive isopod parasite, Orthione griffenis, between Morro Bay, California, and Ketchikan, Alaska, using ddRAD sequencing and estimated its larval dispersal range from laboratory-based survival tests. There was a lack of genetic diversity, structure, and isolation by distance across O. griffenis populations. This work highlights the potential for genetically homogeneous invasive parasite populations to rapidly expand and force fundamental alterations of marine communities.

More articles

The following is a list of the most cited articles based on citations published in the last three years, according to CrossRef.

Open access

Animal movement tools (amt): R package for managing tracking data and conducting habitat selection analyses

  •  880-890
  •  5 February 2019

Graphical Abstract

Animal movement tools (amt): R package for managing tracking data and conducting habitat selection analyses Issue 2, 2019

New tracking technologies allow users to collect large amount of data and address entirely new questions. The amt (animal movement tools) R package provides tools to manage telemetry data and to fit step-selection functions and resource-selection functions.

Open access

Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories

  •  3514-3524
  •  28 August 2014

Graphical Abstract

Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories Issue 18, 2014

Biodiversity is a difficult concept to quantify, partly because of its multidimensional nature, and many simple to complex indices have been developed for this purpose. We collected data on diversity of herbaceous plants, arbuscular mycorrhizal fungi, aboveground arthropods, belowground insect larvae, and Plantago lanceolata molecular and chemical diversity in 60 temperate grasslands and calculated a variety of simple to complex diversity indices for each (S, H', D1, D2, E, BP). While these common diversity indices appeared interchangeable in simple analyses quantifying changes in diversity, when quantifying interactions between diversities the conclusions varied with the index chosen.

Open access

On the selection of thresholds for predicting species occurrence with presence‐only data

  •  337-348
  •  29 December 2015

Graphical Abstract

On the selection of thresholds for predicting species occurrence with presence-only data Issue 1, 2016

Applied ecological problems such as climate change impacts, invasive species impacts, reintroduction sites identification, and conservation planning often require binary models of distributions, and a threshold is needed to transform the continuous results into a binary product, from which species prevalence can be estimated. However, the bias in this estimation (as shown here from threshold selection method maxF) can be very large if the accuracy of the models is not high enough.

Open access

Reconceptualizing synergism and antagonism among multiple stressors

  •  1538-1547
  •  11 March 2015

Graphical Abstract

Reconceptualizing synergism and antagonism among multiple stressors Issue 7, 2015

The potential for complex synergistic or antagonistic interactions among multiple stressors presents one of the largest uncertainties when predicting ecological change but, despite common use of the terms in the scientific literature, a consensus on their operational definition is still lacking. We propose a new systematic classification and emphasize the need for reconsideration by the ecological community of the interpretation of synergism and antagonism in situations where individual stressor effects oppose each other or where cumulative effects are reversed and enhanced.

Open access

Collinearity in ecological niche modeling: Confusions and challenges

  •  10365-10376
  •  20 August 2019

Graphical Abstract

Collinearity in ecological niche modeling: Confusions and challenges Issue 18, 2019

Excluding highly correlated variables does not affect Maxent model performance. Model transfer may lead to novel environment and collinearity shift, while both can negatively affect model performance.

More articles
Open access

Estimation of maximum body size in fossil species: A case study using Tyrannosaurus rex

Graphical Abstract

Estimation of maximum body size in fossil species: A case study using Tyrannosaurus rex Issue 7, 2024

Body size is central focus of evolutionary ecology, but it can be difficult to estimate in fossil organisms, particularly at the extreme limits of size variation. Here, we use population modelling to estimate maximum body size of the familiar Tyrannosaurus rex. We estimate that the largest ever T. rex may have been up to 70% larger than the current largest known specimen, and we explore the implications this might have had for the ecology and biomechanics of the animal.

Open access

How low can you go? Introducing SeXY: sex identification from low‐quantity sequencing data despite lacking assembled sex chromosomes

Graphical Abstract

How low can you go? Introducing SeXY: sex identification from low-quantity sequencing data despite lacking assembled sex chromosomes Issue 8, 2022

We present a novel pipeline for sex identification (SeXY) in non-model organisms that lack high-quality genomes, or that lack available comparative genomic data sets. SeXY accurately determines sex when at least 50,000 mapped reads are available, even when using only a highly fragmented assembly as reference (scaffold N50 of 161 kb). When higher-quality reference genome assemblies (scaffold N50 30 Mb) are used, SeXY provides 100% accuracy even down to 1000 mapped reads, bypassing the need for often expensive high-effort shotgun sequencing.

Open access

Multiple lines of evidence suggest the persistence of the Ivory-billed Woodpecker (Campephilus principalis) in Louisiana

Graphical Abstract

Multiple lines of evidence suggest the persistence of the Ivory-billed Woodpecker (Campephilus principalis) in Louisiana Issue 5, 2023

The last widely accepted sighting of the Ivory-billed Woodpecker in continental North America occurred in 1944. Here, we present evidence suggesting the presence of this species at our study site in Louisiana. Using multiple lines of evidence, including visual observations, acoustic recordings, trail camera photographs, and drone videos, our data suggest intermittent but repeated presence of multiple individual birds with field marks and behaviors consistent with those of Ivory-billed Woodpeckers.

Open access

Early Alarm on the First Occurrence of the Southern Giant Hornet Vespa soror du Buysson, 1905 (Vespidae) in Europe

Graphical Abstract

Early Alarm on the First Occurrence of the Southern Giant Hornet Vespa soror du Buysson, 1905 (Vespidae) in Europe Issue 11, 2024

First occurrence of the Asian southern giant hornet Vespa soror in Europe. We present a detailed description, combining morphological and molecular traits, as well as key information about its identification and current distribution. We discuss the most plausible pathways and vectors of introduction, its potential invasiveness, and subsequent impacts on host localities.

Open access

Paint it black: Efficacy of increased wind turbine rotor blade visibility to reduce avian fatalities

Graphical Abstract

Paint it black: Efficacy of increased wind turbine rotor blade visibility to reduce avian fatalities Issue 16, 2020

Conflicts with birdlife hamper the development of wind energy worldwide. Mitigation measures that reduce the risk of collision by making the rotor blades more conspicuous therefore need to be thoroughly tested. Using a Before–After–Control–Impact approach employing long-term fatality searches, the annual number of bird carcasses per turbine was significantly reduced at the turbines with a painted blade by over 70%, relative to the neighboring control (i.e., unpainted) turbines.

Open access

Cautionary tales on the use of proxies to estimate body size and form of extinct animals

Graphical Abstract

Cautionary tales on the use of proxies to estimate body size and form of extinct animals Issue 9, 2024

Reconstructing the body size and form of extinct animals is of vital importance to our understanding of macroevolution and palaeontology. This is often done using anatomical proxies where extinct species are known only from fragmentary remains. However, there are many limitations influencing the selection of proxy taxa that are frequently overlooked. Here, we discuss these limitations and mitigation measures that should be applied to overcome them.

Open access

Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories

Graphical Abstract

Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories Issue 18, 2014

Biodiversity is a difficult concept to quantify, partly because of its multidimensional nature, and many simple to complex indices have been developed for this purpose. We collected data on diversity of herbaceous plants, arbuscular mycorrhizal fungi, aboveground arthropods, belowground insect larvae, and Plantago lanceolata molecular and chemical diversity in 60 temperate grasslands and calculated a variety of simple to complex diversity indices for each (S, H', D1, D2, E, BP). While these common diversity indices appeared interchangeable in simple analyses quantifying changes in diversity, when quantifying interactions between diversities the conclusions varied with the index chosen.

Open access

TreeViewer: Flexible, modular software to visualise and manipulate phylogenetic trees

Graphical Abstract

TreeViewer: Flexible, modular software to visualise and manipulate phylogenetic trees Issue 2, 2024

TreeViewer is a new software to draw phylogenetic trees that is flexible, modular, and user-friendly. Plots are produced as the result of a user-defined pipeline, which can be finely customised and easily applied to different trees. TreeViewer is mainly aimed at users wishing to produce highly customised, publication-quality tree figures using a single GUI software tool and is released under an AGPLv3 licence for Windows, Linux, and macOS operating systems.

Open access

The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project

Lawrence N. HudsonTim NewboldSara ContuSamantha L. L. HillIgor LysenkoAdriana De PalmaHelen R. P. PhillipsTamera I. AlhusseiniFelicity E. BedfordDominic J. BennettHollie BoothVictoria J. BurtonCharlotte W. T. ChngArgyrios ChoimesDavid L. P. CorreiaJulie DaySusy Echeverría-LondoñoSusan R. EmersonDi GaoMorgan GaronMichelle L. K. HarrisonDaniel J. IngramMartin JungVictoria KempLucinda KirkpatrickCallum D. MartinYuan PanGwilym D. Pask-HaleEdwin L. PynegarAlexandra N. RobinsonKatia Sanchez-OrtizRebecca A. SeniorBenno I. SimmonsHannah J. WhiteHanbin ZhangJob AbenStefan AbrahamczykGilbert B. AdumVirginia Aguilar-BarqueroMarcelo A. AizenBelén AlbertosE. L. AlcalaMaria del Mar AlguacilAudrey AlignierMarc AncrenazAlan N. AndersenEnrique Arbeláez-CortésInge ArmbrechtVíctor Arroyo-RodríguezTom AumannJan C. AxmacherBadrul AzharAdrián B. AzpirozLander BaetenAdama BakayokoAndrás BáldiJohn E. BanksSharad K. BaralJos BarlowBarbara I. P. BarrattLurdes BarricoPaola BartolommeiDiane M. BartonYves BassetPéter BatáryAdam J. BatesBruno BaurErin M. BaynePedro BejaSuzan BenedickÅke BergHenry BernardNicholas J. BerryDinesh BhattJake E. BicknellJochen H. BihnRobin J. BlakeKadiri S. BoboRoberto BóçonTeun BoekhoutKatrin Böhning-GaeseKevin J. BonhamPaulo A. V. BorgesSérgio H. BorgesCéline BoutinJérémy BouyerCibele BragagnoloJodi S. BrandtFrancis Q. BrearleyIsabel BritoVicenç BrosJörg BrunetGrzegorz BuczkowskiChristopher M. BuddleRob BugterErika BuscardoJörn BuseJimmy Cabra-GarcíaNilton C. CáceresNicolette L. CagleMaría Calviño-CancelaSydney A. CameronEliana M. CancelloRut CaparrósPedro CardosoDan CarpenterTiago F. CarrijoAnelena L. CarvalhoCamila R. CassanoHelena CastroAlejandro A. Castro-LunaCerda B. RolandoAlexis CerezoKim Alan ChapmanMatthieu ChauvatMorten ChristensenFrancis M. ClarkeDaniel F.R. ClearyGiorgio ColomboStuart P. ConnopMichael D. CraigLeopoldo Cruz-LópezSaul A. CunninghamBiagio D'AnielloNeil D'CruzePedro Giovâni da SilvaMartin DallimerEmmanuel DanquahBen DarvillJens DauberAdrian L. V. DavisJeff DawsonClaudio de SassiBenoit de ThoisyOlivier DeheuvelsAlain DejeanJean-Louis DevineauTim DiekötterJignasu V. DoliaErwin DomínguezYamileth Dominguez-HaydarSilvia DornIsabel DraperNiels DreberBertrand DumontSimon G. DuresMats DynesiusLars EdeniusPaul EggletonFelix EigenbrodZoltán ElekMartin H. EntlingKaren J. EslerRicardo F. de LimaAisyah FarukNina FarwigTom M. FayleAntonio FelicioliAnnika M. FeltonRoderick J. FenshamIgnacio C. FernandezCatarina C. FerreiraGentile F. FicetolaCristina FieraBruno K. C. FilgueirasHüseyin K. FırıncıoğluDavid FlaspohlerAndreas FlorenSteven J. FonteAnne FournierRobert E. FowlerMarkus FranzénLauchlan H. FraserGabriella M. FredrikssonGeraldo B. FreireTiago L. M. FrizzoDaisuke FukudaDario FurlaniRené GaigherJörg U. GanzhornKarla P. GarcíaJuan C. Garcia-RJenni G. GardenRicardo GarilletiBao-Ming GeBenoit Gendreau-BerthiaumePhilippa J. GerardCarla Gheler-CostaBenjamin GilbertPaolo GiordaniSimonetta GiordanoCarly GolodetsLaurens G. L. GomesRachelle K. GouldDave GoulsonAaron D. GoveLaurent GranjonIngo GrassClaudia L. GrayJames GroganWeibin GuMoisès GuardiolaNihara R. GunawardeneAlvaro G. GutierrezDoris L. Gutiérrez-LamusDaniela H. HaarmeyerMick E. HanleyThor HansonNor R. HashimShombe N. HassanRichard G. HatfieldJoseph E. HawesMatt W. HaywardChristian HébertAlvin J. HeldenJohn-André HendenPhilipp HenschelLionel HernándezJames P. HerreraFarina HerrmannFelix HerzogDiego Higuera-DiazBranko HiljeHubert HöferAnke HoffmannFinbarr G. HorganElisabeth HornungRoland HorváthKristoffer HylanderPaola Isaacs-CubidesHiroaki IshidaMasahiro IshitaniCarmen T. JacobsVíctor J. JaramilloBirgit JaukerF. Jiménez HernándezMcKenzie F. JohnsonVirat JolliMats JonsellS. Nur JulianiThomas S. JungVena KapoorHeike KappesVassiliki KatiEric KatovaiKlaus KellnerMichael KesslerKathryn R. KirbyAndrew M. KittleMairi E. KnightEva KnopFlorian KohlerMatti KoivulaAnnette KolbMouhamadou KoneÁdám KőrösiJochen KraussAjith KumarRaman KumarDavid J. KurzAlex S. KuttThibault LachatVictoria LantschnerFrancisco LaraJesse R. LaskySteven C. LattaWilliam F. LaurancePatrick LavelleViolette Le FéonGretchen LeBuhnJean-Philippe LégaréValérie LehouckMaría V. LencinasPia E. LentiniSusan G. LetcherQi LiSimon A. LitchwarkNick A. LittlewoodYunhui LiuNancy Lo-Man-HungCarlos A. López-QuinteroMounir LouhaichiGabor L. LöveiManuel Esteban Lucas-BorjaVictor H. LujaMatthew S. LuskinM Cristina MacSwiney GKaoru MaetoTibor MaguraNeil Aldrin MallariLouise A. MalonePatrick K. MalonzaJagoba Malumbres-OlarteSalvador MandujanoInger E. MårenErika Marin-SpiottaCharles J. MarshE. J. P. MarshallEliana MartínezGuillermo Martínez PasturDavid Moreno MateosMargaret M. MayfieldVicente MazimpakaJennifer L. McCarthyKyle P. McCarthyQuinn S. McFrederickSean McNamaraNagore G. MedinaRafael MedinaJose L. MenaEstefania MicoGrzegorz MikusinskiJeffrey C. MilderJames R. MillerDaniel R. Miranda-EsquivelMelinda L. MoirCarolina L. MoralesMary N. MuchaneMuchai MuchaneSonja Mudri-StojnicA. Nur MuniraAntonio Muoñz-AlonsoB. F. MunyekenyeRobin NaidooA. NaithaniMichiko NakagawaAkihiro NakamuraYoshihiro NakashimaShoji NaoeGuiomar Nates-ParraDario A. Navarrete GutierrezLuis Navarro-IriartePaul K. Ndang'ang'aEike L. NeuschulzJacqueline T. NgaiViolaine NicolasSven G. NilssonNorbertas NoreikaOlivia NorfolkJorge Ari NoriegaDavid A. NortonNicole M. NöskeA. Justin NowakowskiCatherine NumaNiall O'DeaPatrick J. O'FarrellWilliam OduroSabine OertliCaleb Ofori-BoatengChristopher Omamoke OkeVicencio OostraLynne M. OsgathorpeSamuel Eduardo OtavoNavendu V. PageJuan ParitsisAlejandro Parra-HLuke ParryGuy Pe'erPeter B. PearmanNicolás PelegrinRaphaël PélissierCarlos A. PeresPablo L. PeriAnna S. PerssonTheodora PetanidouMarcell K. PetersRohan S. PethiyagodaBen PhalanT. Keith PhilipsFinn C. PillsburyJimmy Pincheira-UlbrichEduardo PinedaJoan PinoJaime Pizarro-ArayaA. J. PlumptreSantiago L. PoggioNatalia PolitiPere PonsKatja PovedaEileen F. PowerSteven J. PresleyVânia ProençaMarino QuarantaCarolina QuinteroRomina RaderB. R. RameshMartha P. Ramirez-PinillaJai RanganathanClaus RasmussenNicola A. Redpath-DowningJ. Leighton ReidYana T. ReisJosé M. Rey BenayasJuan Carlos Rey-VelascoChevonne ReynoldsDanilo Bandini RibeiroMiriam H. RichardsBarbara A. RichardsonMichael J. RichardsonRodrigo Macip RíosRichard RobinsonCarolina A. RoblesJörg RömbkeLuz Piedad Romero-DuqueMatthias RösLoreta RosselliStephen J. RossiterDana S. RothT'ai H. RoulstonLaurent RousseauAndré V. RubioJean-Claude RuelJonathan P. SadlerSzabolcs SáfiánRomeo A. Saldaña-VázquezKaterina SamUlrika SamnegårdJoana SantanaXavier SantosJade SavageNancy A. SchellhornMenno SchilthuizenUte SchmiedelChristine B. SchmittNicole L. SchonChristof SchüeppKatharina SchumannOliver SchweigerDawn M. ScottKenneth A. ScottJodi L. SedlockSteven S. SeefeldtGhazala ShahabuddinGraeme ShannonDouglas SheilFrederick H. SheldonEyal ShochatStefan J. SiebertFernando A. B. SilvaJavier A. SimonettiEleanor M. SladeJo SmithAllan H. Smith-PardoNavjot S. SodhiEduardo J. SomarribaRamón A. SosaGrimaldo Soto QuirogaMartin-Hugues St-LaurentBrian M. StarzomskiConstanti StefanescuIngolf Steffan-DewenterPhilip C. StoufferJane C. StoutAyron M. StrauchMatthew J. StruebigZhimin SuMarcela Suarez-RubioShinji SugiuraKeith S. SummervilleYik-Hei SungHari SutrisnoJens-Christian SvenningTiit TederCaragh G. ThrelfallAnu TiitsaarJacqui H. ToddRebecca K. ToniettoIgnasi TorreBéla TóthmérészTeja TscharntkeEdgar C. TurnerJason M. TylianakisMarcio Uehara-PradoNicolas Urbina-CardonaDenis VallanAdam J. VanbergenHeraldo L. VasconcelosKiril VassilevHans A. F. VerbovenMaria João VerdascaJosé R. VerdúCarlos H. VergaraPablo M. VergaraJort VerhulstMassimiliano VirgilioLien Van VuEdward M. WaiteTony R. WalkerHua-Feng WangYanping WangJames I. WatlingBritta WellerKonstans WellsCatrin WestphalEdward D. WiafeChristopher D. WilliamsMichael R. WilligJohn C. Z. WoinarskiJan H. D. WolfVolkmar WoltersBen A. WoodcockJihua WuJoseph M. WunderleYuichi YamauraSatoko YoshikuraDouglas W. YuAndrey S. ZaitsevJuliane ZeidlerFasheng ZouBen CollenRob M. EwersGeorgina M. MaceDrew W. PurvesJörn P. W. ScharlemannAndy Purvis

Graphical Abstract

The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project Issue 1, 2017

The collation of biodiversity datasets with broad taxonomic, biogeographic, and spatial extents is necessary to understand historical declines and to project—and hopefully avert—future declines. We describe and make freely available a database of more than 3.2 million biodiversity measurements from 94 countries representing over 47,000 species, collated from 480 existing spatial comparisons of local-scale biodiversity exposed to different intensities and pressures relating to land use, from terrestrial sites around the world.

Open access

Opening a can of worms: Archived canned fish fillets reveal 40 years of change in parasite burden for four Alaskan salmon species

Graphical Abstract

Opening a can of worms: Archived canned fish fillets reveal 40 years of change in parasite burden for four Alaskan salmon species Issue 4, 2024

Parasitic nematodes of the family Anisakidae (anisakids) can use salmon fishes as intermediate hosts in life cycles that terminate in marine mammal definitive hosts. To assess whether the anisakid burden has changed in salmon over time, we dissected a novel data source: chum, coho, pink, and sockeye salmon that were caught, canned, and thermally processed for human consumption in Alaska, USA between 1979 and 2019. Anisakid burden increased over time in chum and pink salmon, but there was no change in sockeye or coho salmon, possibly due to differences in the prey preferences of each species, or time spent in marine systems.

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